RNA–Protein interactions for RNA: ENST00000378576.8

MEST-203, mesoderm specific transcript, humanhuman

TSL 5 BASIC

Gene MEST, Length 2,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-203ENST00000378576 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
MEST-203ENST00000378576 ABCC9O60706 1549 aa21.36■■□□□ 1.01
MEST-203ENST00000378576 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
MEST-203ENST00000378576 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
MEST-203ENST00000378576 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
MEST-203ENST00000378576 NACADO15069 1562 aa19.95■□□□□ 0.78
MEST-203ENST00000378576 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
MEST-203ENST00000378576 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
MEST-203ENST00000378576 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
MEST-203ENST00000378576 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
MEST-203ENST00000378576 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
MEST-203ENST00000378576 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
MEST-203ENST00000378576 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
MEST-203ENST00000378576 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
MEST-203ENST00000378576 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
MEST-203ENST00000378576 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
MEST-203ENST00000378576 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
MEST-203ENST00000378576 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
MEST-203ENST00000378576 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
MEST-203ENST00000378576 CUX2O14529 1486 aa18.64■□□□□ 0.57
MEST-203ENST00000378576 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
MEST-203ENST00000378576 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
MEST-203ENST00000378576 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
MEST-203ENST00000378576 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
MEST-203ENST00000378576 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
MEST-203ENST00000378576 NESP48681 1621 aa18.22■□□□□ 0.51
MEST-203ENST00000378576 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
MEST-203ENST00000378576 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
MEST-203ENST00000378576 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
MEST-203ENST00000378576 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
MEST-203ENST00000378576 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
MEST-203ENST00000378576 PEG3Q9GZU2 1588 aa18.01■□□□□ 0.47
MEST-203ENST00000378576 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
MEST-203ENST00000378576 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
MEST-203ENST00000378576 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
MEST-203ENST00000378576 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
MEST-203ENST00000378576 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
MEST-203ENST00000378576 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
MEST-203ENST00000378576 MROH2BQ7Z745 1585 aa17.82■□□□□ 0.44
MEST-203ENST00000378576 WDR62O43379 1518 aa17.82■□□□□ 0.44
MEST-203ENST00000378576 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
MEST-203ENST00000378576 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
MEST-203ENST00000378576 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
MEST-203ENST00000378576 WIZO95785 1651 aa17.57■□□□□ 0.4
MEST-203ENST00000378576 CFTRP13569 1480 aa17.55■□□□□ 0.4
MEST-203ENST00000378576 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
MEST-203ENST00000378576 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
MEST-203ENST00000378576 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
MEST-203ENST00000378576 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
MEST-203ENST00000378576 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
MEST-203ENST00000378576 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
MEST-203ENST00000378576 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
MEST-203ENST00000378576 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
MEST-203ENST00000378576 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
MEST-203ENST00000378576 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
MEST-203ENST00000378576 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
MEST-203ENST00000378576 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
MEST-203ENST00000378576 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
MEST-203ENST00000378576 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
MEST-203ENST00000378576 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
MEST-203ENST00000378576 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
MEST-203ENST00000378576 CHD1O14646 1710 aa17.16■□□□□ 0.34
MEST-203ENST00000378576 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
MEST-203ENST00000378576 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
MEST-203ENST00000378576 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
MEST-203ENST00000378576 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
MEST-203ENST00000378576 FBLN2P98095 1184 aa17.08■□□□□ 0.32
MEST-203ENST00000378576 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
MEST-203ENST00000378576 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
MEST-203ENST00000378576 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
MEST-203ENST00000378576 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
MEST-203ENST00000378576 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
MEST-203ENST00000378576 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
MEST-203ENST00000378576 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
MEST-203ENST00000378576 SOGA1O94964 1423 aa16.95■□□□□ 0.3
MEST-203ENST00000378576 SYNJ1O43426 1573 aa16.95■□□□□ 0.3
MEST-203ENST00000378576 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
MEST-203ENST00000378576 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
MEST-203ENST00000378576 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
MEST-203ENST00000378576 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
MEST-203ENST00000378576 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
MEST-203ENST00000378576 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
MEST-203ENST00000378576 CUX1P39880 1505 aa16.78■□□□□ 0.28
MEST-203ENST00000378576 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
MEST-203ENST00000378576 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
MEST-203ENST00000378576 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
MEST-203ENST00000378576 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
MEST-203ENST00000378576 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
MEST-203ENST00000378576 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
MEST-203ENST00000378576 NUP160Q12769 1436 aa16.62■□□□□ 0.25
MEST-203ENST00000378576 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
MEST-203ENST00000378576 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
MEST-203ENST00000378576 KIF13AQ9H1H9 1805 aa16.57■□□□□ 0.24
MEST-203ENST00000378576 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.24
MEST-203ENST00000378576 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
MEST-203ENST00000378576 ABCC10Q5T3U5 1492 aa16.47■□□□□ 0.23
MEST-203ENST00000378576 PRG4Q92954 1404 aaPredicted RBP16.46■□□□□ 0.23
MEST-203ENST00000378576 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
MEST-203ENST00000378576 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
MEST-203ENST00000378576 MAPKBP1O60336 1514 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms