RNA–Protein interactions for RNA: ENST00000371442.3

RNF113A-201, Transcript of ring finger protein 113A, humanhuman

APPRIS P1 BASIC

Gene RNF113A, Length 1,353 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113A-201ENST00000371442 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
RNF113A-201ENST00000371442 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
RNF113A-201ENST00000371442 ABCC9O60706 1549 aa25.91■■□□□ 1.74
RNF113A-201ENST00000371442 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
RNF113A-201ENST00000371442 NACADO15069 1562 aa24.7■■□□□ 1.55
RNF113A-201ENST00000371442 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
RNF113A-201ENST00000371442 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
RNF113A-201ENST00000371442 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.5
RNF113A-201ENST00000371442 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
RNF113A-201ENST00000371442 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
RNF113A-201ENST00000371442 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
RNF113A-201ENST00000371442 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
RNF113A-201ENST00000371442 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
RNF113A-201ENST00000371442 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
RNF113A-201ENST00000371442 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
RNF113A-201ENST00000371442 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
RNF113A-201ENST00000371442 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
RNF113A-201ENST00000371442 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
RNF113A-201ENST00000371442 CECR2Q9BXF3 1484 aa23.32■■□□□ 1.32
RNF113A-201ENST00000371442 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
RNF113A-201ENST00000371442 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
RNF113A-201ENST00000371442 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
RNF113A-201ENST00000371442 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
RNF113A-201ENST00000371442 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
RNF113A-201ENST00000371442 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
RNF113A-201ENST00000371442 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
RNF113A-201ENST00000371442 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
RNF113A-201ENST00000371442 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
RNF113A-201ENST00000371442 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
RNF113A-201ENST00000371442 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
RNF113A-201ENST00000371442 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
RNF113A-201ENST00000371442 WIZO95785 1651 aa22.42■■□□□ 1.18
RNF113A-201ENST00000371442 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
RNF113A-201ENST00000371442 NESP48681 1621 aa22.33■■□□□ 1.16
RNF113A-201ENST00000371442 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
RNF113A-201ENST00000371442 CUX2O14529 1486 aa22.26■■□□□ 1.15
RNF113A-201ENST00000371442 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
RNF113A-201ENST00000371442 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
RNF113A-201ENST00000371442 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
RNF113A-201ENST00000371442 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
RNF113A-201ENST00000371442 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
RNF113A-201ENST00000371442 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
RNF113A-201ENST00000371442 CFTRP13569 1480 aa21.9■■□□□ 1.1
RNF113A-201ENST00000371442 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
RNF113A-201ENST00000371442 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
RNF113A-201ENST00000371442 DNAJC5Q9H3Z4 198 aa21.87■■□□□ 1.09
RNF113A-201ENST00000371442 WDR62O43379 1518 aa21.85■■□□□ 1.09
RNF113A-201ENST00000371442 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
RNF113A-201ENST00000371442 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
RNF113A-201ENST00000371442 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
RNF113A-201ENST00000371442 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
RNF113A-201ENST00000371442 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
RNF113A-201ENST00000371442 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
RNF113A-201ENST00000371442 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
RNF113A-201ENST00000371442 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
RNF113A-201ENST00000371442 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
RNF113A-201ENST00000371442 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
RNF113A-201ENST00000371442 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.02
RNF113A-201ENST00000371442 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
RNF113A-201ENST00000371442 EEA1Q15075 1411 aa21.31■■□□□ 1
RNF113A-201ENST00000371442 SYNJ1O43426 1573 aa21.3■■□□□ 1
RNF113A-201ENST00000371442 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
RNF113A-201ENST00000371442 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
RNF113A-201ENST00000371442 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
RNF113A-201ENST00000371442 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
RNF113A-201ENST00000371442 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
RNF113A-201ENST00000371442 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
RNF113A-201ENST00000371442 CUX1P39880 1505 aa21.19■□□□□ 0.98
RNF113A-201ENST00000371442 SOGA1O94964 1423 aa21.18■□□□□ 0.98
RNF113A-201ENST00000371442 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
RNF113A-201ENST00000371442 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
RNF113A-201ENST00000371442 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
RNF113A-201ENST00000371442 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
RNF113A-201ENST00000371442 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
RNF113A-201ENST00000371442 CHD1O14646 1710 aa21.1■□□□□ 0.97
RNF113A-201ENST00000371442 RUSC2Q8N2Y8 1516 aa21.06■□□□□ 0.96
RNF113A-201ENST00000371442 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
RNF113A-201ENST00000371442 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
RNF113A-201ENST00000371442 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
RNF113A-201ENST00000371442 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
RNF113A-201ENST00000371442 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
RNF113A-201ENST00000371442 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
RNF113A-201ENST00000371442 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
RNF113A-201ENST00000371442 PBRM1Q86U86 1689 aa20.97■□□□□ 0.95
RNF113A-201ENST00000371442 KIF21BO75037 1637 aa20.97■□□□□ 0.95
RNF113A-201ENST00000371442 GRIN2BQ13224 1484 aa20.96■□□□□ 0.95
RNF113A-201ENST00000371442 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
RNF113A-201ENST00000371442 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
RNF113A-201ENST00000371442 FBLN2P98095 1184 aa20.95■□□□□ 0.94
RNF113A-201ENST00000371442 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
RNF113A-201ENST00000371442 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
RNF113A-201ENST00000371442 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
RNF113A-201ENST00000371442 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
RNF113A-201ENST00000371442 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
RNF113A-201ENST00000371442 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
RNF113A-201ENST00000371442 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
RNF113A-201ENST00000371442 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
RNF113A-201ENST00000371442 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.93
RNF113A-201ENST00000371442 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
RNF113A-201ENST00000371442 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms