RNA–Protein interactions for RNA: ENST00000370474.3

SDHAF4-201, Transcript of succinate dehydrogenase complex assembly factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF4, Length 1,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF4-201ENST00000370474 NISCHQ9Y2I1 1504 aa35.11■■■■□ 3.21
SDHAF4-201ENST00000370474 ABCC9O60706 1549 aa32.45■■■□□ 2.78
SDHAF4-201ENST00000370474 AEBP2Q6ZN18 517 aaPredicted RBP32.2■■■□□ 2.75
SDHAF4-201ENST00000370474 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
SDHAF4-201ENST00000370474 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
SDHAF4-201ENST00000370474 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
SDHAF4-201ENST00000370474 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
SDHAF4-201ENST00000370474 NACADO15069 1562 aa30.25■■■□□ 2.43
SDHAF4-201ENST00000370474 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
SDHAF4-201ENST00000370474 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
SDHAF4-201ENST00000370474 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
SDHAF4-201ENST00000370474 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
SDHAF4-201ENST00000370474 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
SDHAF4-201ENST00000370474 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
SDHAF4-201ENST00000370474 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
SDHAF4-201ENST00000370474 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
SDHAF4-201ENST00000370474 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SDHAF4-201ENST00000370474 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
SDHAF4-201ENST00000370474 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
SDHAF4-201ENST00000370474 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
SDHAF4-201ENST00000370474 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
SDHAF4-201ENST00000370474 CUX2O14529 1486 aa28.29■■■□□ 2.12
SDHAF4-201ENST00000370474 ERCC6Q03468 1493 aa28.11■■■□□ 2.09
SDHAF4-201ENST00000370474 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
SDHAF4-201ENST00000370474 ATAD2BQ9ULI0 1458 aa27.73■■■□□ 2.03
SDHAF4-201ENST00000370474 NESP48681 1621 aa27.66■■■□□ 2.02
SDHAF4-201ENST00000370474 HMGXB3Q12766 1538 aa27.66■■■□□ 2.02
SDHAF4-201ENST00000370474 SMARCA2P51531 1590 aa27.64■■■□□ 2.01
SDHAF4-201ENST00000370474 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
SDHAF4-201ENST00000370474 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
SDHAF4-201ENST00000370474 SMARCA4P51532 1647 aa27.52■■■□□ 2
SDHAF4-201ENST00000370474 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
SDHAF4-201ENST00000370474 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
SDHAF4-201ENST00000370474 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
SDHAF4-201ENST00000370474 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
SDHAF4-201ENST00000370474 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
SDHAF4-201ENST00000370474 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
SDHAF4-201ENST00000370474 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
SDHAF4-201ENST00000370474 PHF23Q9BUL5 403 aaPredicted RBP27.16■■□□□ 1.94
SDHAF4-201ENST00000370474 MRC2Q9UBG0 1479 aa27.07■■□□□ 1.92
SDHAF4-201ENST00000370474 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
SDHAF4-201ENST00000370474 WDR62O43379 1518 aa27.02■■□□□ 1.92
SDHAF4-201ENST00000370474 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
SDHAF4-201ENST00000370474 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
SDHAF4-201ENST00000370474 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
SDHAF4-201ENST00000370474 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
SDHAF4-201ENST00000370474 WIZO95785 1651 aa26.64■■□□□ 1.86
SDHAF4-201ENST00000370474 CFTRP13569 1480 aa26.6■■□□□ 1.85
SDHAF4-201ENST00000370474 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
SDHAF4-201ENST00000370474 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
SDHAF4-201ENST00000370474 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
SDHAF4-201ENST00000370474 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
SDHAF4-201ENST00000370474 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
SDHAF4-201ENST00000370474 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
SDHAF4-201ENST00000370474 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
SDHAF4-201ENST00000370474 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
SDHAF4-201ENST00000370474 CYB5RLQ6IPT4 315 aa26.3■■□□□ 1.8
SDHAF4-201ENST00000370474 TRHP20396 242 aaPredicted RBP26.25■■□□□ 1.79
SDHAF4-201ENST00000370474 PRDM2Q13029 1718 aa26.23■■□□□ 1.79
SDHAF4-201ENST00000370474 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
SDHAF4-201ENST00000370474 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
SDHAF4-201ENST00000370474 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
SDHAF4-201ENST00000370474 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
SDHAF4-201ENST00000370474 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
SDHAF4-201ENST00000370474 CHD1O14646 1710 aa26.05■■□□□ 1.76
SDHAF4-201ENST00000370474 FBLN2P98095 1184 aa26.01■■□□□ 1.75
SDHAF4-201ENST00000370474 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
SDHAF4-201ENST00000370474 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
SDHAF4-201ENST00000370474 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
SDHAF4-201ENST00000370474 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
SDHAF4-201ENST00000370474 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
SDHAF4-201ENST00000370474 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
SDHAF4-201ENST00000370474 TDRD9Q8NDG6 1382 aaKnown RBP25.74■■□□□ 1.71
SDHAF4-201ENST00000370474 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
SDHAF4-201ENST00000370474 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
SDHAF4-201ENST00000370474 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
SDHAF4-201ENST00000370474 SOGA1O94964 1423 aa25.72■■□□□ 1.71
SDHAF4-201ENST00000370474 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
SDHAF4-201ENST00000370474 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
SDHAF4-201ENST00000370474 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
SDHAF4-201ENST00000370474 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
SDHAF4-201ENST00000370474 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
SDHAF4-201ENST00000370474 FOXD1Q16676 465 aa25.57■■□□□ 1.68
SDHAF4-201ENST00000370474 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
SDHAF4-201ENST00000370474 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
SDHAF4-201ENST00000370474 CUX1P39880 1505 aa25.42■■□□□ 1.66
SDHAF4-201ENST00000370474 PBRM1Q86U86 1689 aa25.39■■□□□ 1.65
SDHAF4-201ENST00000370474 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
SDHAF4-201ENST00000370474 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
SDHAF4-201ENST00000370474 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
SDHAF4-201ENST00000370474 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
SDHAF4-201ENST00000370474 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
SDHAF4-201ENST00000370474 NUP160Q12769 1436 aa25.18■■□□□ 1.62
SDHAF4-201ENST00000370474 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
SDHAF4-201ENST00000370474 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
SDHAF4-201ENST00000370474 ADAMTS12P58397 1594 aa25.12■■□□□ 1.61
SDHAF4-201ENST00000370474 FHAD1B1AJZ9 1412 aa25.06■■□□□ 1.6
SDHAF4-201ENST00000370474 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
SDHAF4-201ENST00000370474 FAM69CQ0P6D2 419 aa25.01■■□□□ 1.59
SDHAF4-201ENST00000370474 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms