RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
TUBE1-201ENST00000368657 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
TUBE1-201ENST00000368657 ABCC9O60706 1549 aa25.91■■□□□ 1.74
TUBE1-201ENST00000368657 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
TUBE1-201ENST00000368657 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
TUBE1-201ENST00000368657 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
TUBE1-201ENST00000368657 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
TUBE1-201ENST00000368657 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
TUBE1-201ENST00000368657 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
TUBE1-201ENST00000368657 NACADO15069 1562 aa23.79■■□□□ 1.4
TUBE1-201ENST00000368657 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
TUBE1-201ENST00000368657 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
TUBE1-201ENST00000368657 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
TUBE1-201ENST00000368657 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
TUBE1-201ENST00000368657 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
TUBE1-201ENST00000368657 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
TUBE1-201ENST00000368657 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
TUBE1-201ENST00000368657 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
TUBE1-201ENST00000368657 CUX2O14529 1486 aa22.87■■□□□ 1.25
TUBE1-201ENST00000368657 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
TUBE1-201ENST00000368657 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
TUBE1-201ENST00000368657 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
TUBE1-201ENST00000368657 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
TUBE1-201ENST00000368657 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
TUBE1-201ENST00000368657 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
TUBE1-201ENST00000368657 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
TUBE1-201ENST00000368657 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
TUBE1-201ENST00000368657 NESP48681 1621 aa21.91■■□□□ 1.1
TUBE1-201ENST00000368657 THOC2Q8NI27 1593 aaKnown RBP21.89■■□□□ 1.09
TUBE1-201ENST00000368657 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
TUBE1-201ENST00000368657 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
TUBE1-201ENST00000368657 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
TUBE1-201ENST00000368657 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
TUBE1-201ENST00000368657 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
TUBE1-201ENST00000368657 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
TUBE1-201ENST00000368657 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
TUBE1-201ENST00000368657 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
TUBE1-201ENST00000368657 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
TUBE1-201ENST00000368657 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
TUBE1-201ENST00000368657 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
TUBE1-201ENST00000368657 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
TUBE1-201ENST00000368657 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
TUBE1-201ENST00000368657 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
TUBE1-201ENST00000368657 WDR62O43379 1518 aa21.39■■□□□ 1.01
TUBE1-201ENST00000368657 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
TUBE1-201ENST00000368657 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
TUBE1-201ENST00000368657 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
TUBE1-201ENST00000368657 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
TUBE1-201ENST00000368657 PEG3Q9GZU2 1588 aa21.21■□□□□ 0.99
TUBE1-201ENST00000368657 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
TUBE1-201ENST00000368657 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
TUBE1-201ENST00000368657 ARAP1Q96P48 1450 aa20.93■□□□□ 0.94
TUBE1-201ENST00000368657 FOXD1Q16676 465 aa20.87■□□□□ 0.93
TUBE1-201ENST00000368657 MROH2BQ7Z745 1585 aa20.86■□□□□ 0.93
TUBE1-201ENST00000368657 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
TUBE1-201ENST00000368657 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
TUBE1-201ENST00000368657 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
TUBE1-201ENST00000368657 CFTRP13569 1480 aa20.78■□□□□ 0.92
TUBE1-201ENST00000368657 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
TUBE1-201ENST00000368657 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
TUBE1-201ENST00000368657 FBLN2P98095 1184 aa20.66■□□□□ 0.9
TUBE1-201ENST00000368657 CHD1O14646 1710 aa20.61■□□□□ 0.89
TUBE1-201ENST00000368657 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
TUBE1-201ENST00000368657 WIZO95785 1651 aa20.52■□□□□ 0.88
TUBE1-201ENST00000368657 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
TUBE1-201ENST00000368657 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
TUBE1-201ENST00000368657 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
TUBE1-201ENST00000368657 CLASP1Q7Z460 1538 aa20.4■□□□□ 0.86
TUBE1-201ENST00000368657 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
TUBE1-201ENST00000368657 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
TUBE1-201ENST00000368657 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
TUBE1-201ENST00000368657 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
TUBE1-201ENST00000368657 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
TUBE1-201ENST00000368657 SYNJ1O43426 1573 aa20.33■□□□□ 0.84
TUBE1-201ENST00000368657 KDM4FA0A1W2PPD8 638 aa20.31■□□□□ 0.84
TUBE1-201ENST00000368657 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
TUBE1-201ENST00000368657 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
TUBE1-201ENST00000368657 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
TUBE1-201ENST00000368657 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
TUBE1-201ENST00000368657 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
TUBE1-201ENST00000368657 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
TUBE1-201ENST00000368657 SOGA1O94964 1423 aa20.14■□□□□ 0.81
TUBE1-201ENST00000368657 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
TUBE1-201ENST00000368657 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
TUBE1-201ENST00000368657 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
TUBE1-201ENST00000368657 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
TUBE1-201ENST00000368657 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
TUBE1-201ENST00000368657 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
TUBE1-201ENST00000368657 FAM69CQ0P6D2 419 aa20.03■□□□□ 0.8
TUBE1-201ENST00000368657 FBXO41Q8TF61 875 aa20.03■□□□□ 0.8
TUBE1-201ENST00000368657 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
TUBE1-201ENST00000368657 ABCC10Q5T3U5 1492 aa19.94■□□□□ 0.78
TUBE1-201ENST00000368657 KDM6BO15054 1643 aa19.92■□□□□ 0.78
TUBE1-201ENST00000368657 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
TUBE1-201ENST00000368657 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
TUBE1-201ENST00000368657 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
TUBE1-201ENST00000368657 HECW2Q9P2P5 1572 aa19.86■□□□□ 0.77
TUBE1-201ENST00000368657 ADGRL1O94910 1474 aa19.8■□□□□ 0.76
TUBE1-201ENST00000368657 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
TUBE1-201ENST00000368657 MAPKBP1O60336 1514 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms