RNA–Protein interactions for RNA: ENST00000367206.7

SOX5-201, Transcript of SRY-box 5, humanhuman

TSL 2

Gene SOX5, Length 1,816 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-201ENST00000367206 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
SOX5-201ENST00000367206 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
SOX5-201ENST00000367206 ABCC9O60706 1549 aa13.69□□□□□ -0.22
SOX5-201ENST00000367206 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
SOX5-201ENST00000367206 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
SOX5-201ENST00000367206 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
SOX5-201ENST00000367206 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
SOX5-201ENST00000367206 NACADO15069 1562 aa13.21□□□□□ -0.3
SOX5-201ENST00000367206 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
SOX5-201ENST00000367206 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
SOX5-201ENST00000367206 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
SOX5-201ENST00000367206 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
SOX5-201ENST00000367206 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
SOX5-201ENST00000367206 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
SOX5-201ENST00000367206 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
SOX5-201ENST00000367206 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
SOX5-201ENST00000367206 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
SOX5-201ENST00000367206 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
SOX5-201ENST00000367206 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
SOX5-201ENST00000367206 EIF4G1Q04637 1599 aaKnown RBP12.45□□□□□ -0.42
SOX5-201ENST00000367206 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
SOX5-201ENST00000367206 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
SOX5-201ENST00000367206 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
SOX5-201ENST00000367206 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
SOX5-201ENST00000367206 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
SOX5-201ENST00000367206 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
SOX5-201ENST00000367206 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
SOX5-201ENST00000367206 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
SOX5-201ENST00000367206 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
SOX5-201ENST00000367206 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
SOX5-201ENST00000367206 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
SOX5-201ENST00000367206 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
SOX5-201ENST00000367206 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
SOX5-201ENST00000367206 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
SOX5-201ENST00000367206 WIZO95785 1651 aa12.05□□□□□ -0.48
SOX5-201ENST00000367206 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
SOX5-201ENST00000367206 DAXXQ9UER7 740 aaPredicted RBP11.9□□□□□ -0.5
SOX5-201ENST00000367206 PHF23Q9BUL5 403 aaPredicted RBP11.89□□□□□ -0.51
SOX5-201ENST00000367206 NESP48681 1621 aa11.86□□□□□ -0.51
SOX5-201ENST00000367206 LAMC3Q9Y6N6 1575 aa11.85□□□□□ -0.51
SOX5-201ENST00000367206 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
SOX5-201ENST00000367206 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
SOX5-201ENST00000367206 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.51
SOX5-201ENST00000367206 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
SOX5-201ENST00000367206 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
SOX5-201ENST00000367206 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
SOX5-201ENST00000367206 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
SOX5-201ENST00000367206 CFTRP13569 1480 aa11.78□□□□□ -0.52
SOX5-201ENST00000367206 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
SOX5-201ENST00000367206 KCNA4P22459 653 aa11.72□□□□□ -0.53
SOX5-201ENST00000367206 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
SOX5-201ENST00000367206 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
SOX5-201ENST00000367206 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
SOX5-201ENST00000367206 CUX2O14529 1486 aa11.66□□□□□ -0.54
SOX5-201ENST00000367206 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
SOX5-201ENST00000367206 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
SOX5-201ENST00000367206 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
SOX5-201ENST00000367206 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
SOX5-201ENST00000367206 WDR62O43379 1518 aa11.6□□□□□ -0.55
SOX5-201ENST00000367206 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
SOX5-201ENST00000367206 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
SOX5-201ENST00000367206 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
SOX5-201ENST00000367206 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
SOX5-201ENST00000367206 PRKCSHP14314 528 aaPredicted RBP11.47□□□□□ -0.57
SOX5-201ENST00000367206 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
SOX5-201ENST00000367206 CUX1P39880 1505 aa11.44□□□□□ -0.58
SOX5-201ENST00000367206 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
SOX5-201ENST00000367206 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
SOX5-201ENST00000367206 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
SOX5-201ENST00000367206 SOGA1O94964 1423 aa11.39□□□□□ -0.59
SOX5-201ENST00000367206 TARBP1Q13395 1621 aaKnown RBP11.37□□□□□ -0.59
SOX5-201ENST00000367206 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
SOX5-201ENST00000367206 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
SOX5-201ENST00000367206 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
SOX5-201ENST00000367206 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
SOX5-201ENST00000367206 BIVM-ERCC5R4GMW8 1640 aa11.34□□□□□ -0.59
SOX5-201ENST00000367206 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.69e-10■■■□□ 15.5
SOX5-201ENST00000367206 EIF4G3O43432 1585 aaKnown RBP11.31□□□□□ -0.6
SOX5-201ENST00000367206 TDRD9Q8NDG6 1382 aaKnown RBP11.31□□□□□ -0.6
SOX5-201ENST00000367206 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
SOX5-201ENST00000367206 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
SOX5-201ENST00000367206 ARXQ96QS3 562 aa11.3□□□□□ -0.6
SOX5-201ENST00000367206 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
SOX5-201ENST00000367206 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
SOX5-201ENST00000367206 TIMELESSQ9UNS1 1208 aa11.23□□□□□ -0.61
SOX5-201ENST00000367206 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
SOX5-201ENST00000367206 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
SOX5-201ENST00000367206 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
SOX5-201ENST00000367206 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.62
SOX5-201ENST00000367206 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
SOX5-201ENST00000367206 FBLN2P98095 1184 aa11.19□□□□□ -0.62
SOX5-201ENST00000367206 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
SOX5-201ENST00000367206 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
SOX5-201ENST00000367206 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
SOX5-201ENST00000367206 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
SOX5-201ENST00000367206 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
SOX5-201ENST00000367206 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
SOX5-201ENST00000367206 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
SOX5-201ENST00000367206 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
SOX5-201ENST00000367206 FHAD1B1AJZ9 1412 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms