RNA–Protein interactions for RNA: ENST00000360594.9

TC2N-202, Transcript of tandem C2 domains, nuclear, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TC2N, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TC2N-202ENST00000360594 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
TC2N-202ENST00000360594 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
TC2N-202ENST00000360594 ABCC9O60706 1549 aa16.62■□□□□ 0.25
TC2N-202ENST00000360594 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
TC2N-202ENST00000360594 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
TC2N-202ENST00000360594 NACADO15069 1562 aa16.35■□□□□ 0.21
TC2N-202ENST00000360594 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
TC2N-202ENST00000360594 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
TC2N-202ENST00000360594 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
TC2N-202ENST00000360594 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
TC2N-202ENST00000360594 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
TC2N-202ENST00000360594 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
TC2N-202ENST00000360594 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
TC2N-202ENST00000360594 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
TC2N-202ENST00000360594 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
TC2N-202ENST00000360594 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
TC2N-202ENST00000360594 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
TC2N-202ENST00000360594 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
TC2N-202ENST00000360594 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
TC2N-202ENST00000360594 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
TC2N-202ENST00000360594 NCAPD3P42695 1498 aa15.05■□□□□ -0
TC2N-202ENST00000360594 SMARCA2P51531 1590 aa14.96□□□□□ -0.02
TC2N-202ENST00000360594 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
TC2N-202ENST00000360594 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
TC2N-202ENST00000360594 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
TC2N-202ENST00000360594 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
TC2N-202ENST00000360594 THOC2Q8NI27 1593 aaKnown RBP14.79□□□□□ -0.04
TC2N-202ENST00000360594 PRDM2Q13029 1718 aa14.77□□□□□ -0.04
TC2N-202ENST00000360594 WIZO95785 1651 aa14.72□□□□□ -0.05
TC2N-202ENST00000360594 LAMC3Q9Y6N6 1575 aa14.71□□□□□ -0.06
TC2N-202ENST00000360594 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
TC2N-202ENST00000360594 CUX2O14529 1486 aa14.62□□□□□ -0.07
TC2N-202ENST00000360594 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
TC2N-202ENST00000360594 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
TC2N-202ENST00000360594 NESP48681 1621 aa14.53□□□□□ -0.08
TC2N-202ENST00000360594 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
TC2N-202ENST00000360594 WDR62O43379 1518 aa14.53□□□□□ -0.08
TC2N-202ENST00000360594 CFTRP13569 1480 aa14.45□□□□□ -0.1
TC2N-202ENST00000360594 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.11
TC2N-202ENST00000360594 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
TC2N-202ENST00000360594 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
TC2N-202ENST00000360594 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
TC2N-202ENST00000360594 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
TC2N-202ENST00000360594 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
TC2N-202ENST00000360594 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
TC2N-202ENST00000360594 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
TC2N-202ENST00000360594 ERCC6Q03468 1493 aa14.15□□□□□ -0.15
TC2N-202ENST00000360594 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
TC2N-202ENST00000360594 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
TC2N-202ENST00000360594 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
TC2N-202ENST00000360594 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
TC2N-202ENST00000360594 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
TC2N-202ENST00000360594 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
TC2N-202ENST00000360594 ABCC8Q09428 1581 aa13.99□□□□□ -0.17
TC2N-202ENST00000360594 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
TC2N-202ENST00000360594 CUX1P39880 1505 aa13.97□□□□□ -0.17
TC2N-202ENST00000360594 IFT140Q96RY7 1462 aa13.96□□□□□ -0.18
TC2N-202ENST00000360594 CHD1O14646 1710 aa13.94□□□□□ -0.18
TC2N-202ENST00000360594 PBRM1Q86U86 1689 aa13.94□□□□□ -0.18
TC2N-202ENST00000360594 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
TC2N-202ENST00000360594 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.18
TC2N-202ENST00000360594 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
TC2N-202ENST00000360594 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
TC2N-202ENST00000360594 SHROOM2Q13796 1616 aa13.82□□□□□ -0.2
TC2N-202ENST00000360594 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
TC2N-202ENST00000360594 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
TC2N-202ENST00000360594 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
TC2N-202ENST00000360594 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
TC2N-202ENST00000360594 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
TC2N-202ENST00000360594 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
TC2N-202ENST00000360594 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
TC2N-202ENST00000360594 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
TC2N-202ENST00000360594 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
TC2N-202ENST00000360594 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
TC2N-202ENST00000360594 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
TC2N-202ENST00000360594 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
TC2N-202ENST00000360594 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
TC2N-202ENST00000360594 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
TC2N-202ENST00000360594 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
TC2N-202ENST00000360594 NUP160Q12769 1436 aa13.59□□□□□ -0.23
TC2N-202ENST00000360594 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
TC2N-202ENST00000360594 SOGA1O94964 1423 aa13.58□□□□□ -0.23
TC2N-202ENST00000360594 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
TC2N-202ENST00000360594 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
TC2N-202ENST00000360594 CUL7Q14999 1698 aa13.53□□□□□ -0.24
TC2N-202ENST00000360594 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.24
TC2N-202ENST00000360594 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
TC2N-202ENST00000360594 ERCC6L2Q5T890 1561 aa13.48□□□□□ -0.25
TC2N-202ENST00000360594 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
TC2N-202ENST00000360594 KIF13AQ9H1H9 1805 aa13.45□□□□□ -0.26
TC2N-202ENST00000360594 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
TC2N-202ENST00000360594 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
TC2N-202ENST00000360594 FHAD1B1AJZ9 1412 aa13.4□□□□□ -0.26
TC2N-202ENST00000360594 CTTNBP2Q8WZ74 1663 aa13.34□□□□□ -0.27
TC2N-202ENST00000360594 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.27
TC2N-202ENST00000360594 PPRC1Q5VV67 1664 aaKnown RBP13.31□□□□□ -0.28
TC2N-202ENST00000360594 IGF1RP08069 1367 aa13.29□□□□□ -0.28
TC2N-202ENST00000360594 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
TC2N-202ENST00000360594 UGGT2Q9NYU1 1516 aa13.26□□□□□ -0.29
TC2N-202ENST00000360594 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms