RNA–Protein interactions for RNA: ENST00000356641.7

ARHGEF12-201, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5 BASIC

Gene ARHGEF12, Length 6,891 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-201ENST00000356641 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
ARHGEF12-201ENST00000356641 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
ARHGEF12-201ENST00000356641 SUPT5HO00267 1087 aaKnown RBP12.7□□□□□ -0.38
ARHGEF12-201ENST00000356641 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
ARHGEF12-201ENST00000356641 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
ARHGEF12-201ENST00000356641 APLP2Q06481 763 aa12.33□□□□□ -0.44
ARHGEF12-201ENST00000356641 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF12-201ENST00000356641 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF12-201ENST00000356641 CENPBP07199 599 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF12-201ENST00000356641 TRIM41Q8WV44 630 aa12□□□□□ -0.49
ARHGEF12-201ENST00000356641 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF12-201ENST00000356641 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.51
ARHGEF12-201ENST00000356641 MYT1Q01538 1121 aa11.87□□□□□ -0.51
ARHGEF12-201ENST00000356641 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
ARHGEF12-201ENST00000356641 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
ARHGEF12-201ENST00000356641 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF12-201ENST00000356641 NEFLP07196 543 aa11.67□□□□□ -0.54
ARHGEF12-201ENST00000356641 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
ARHGEF12-201ENST00000356641 HRCP23327 699 aa11.6□□□□□ -0.55
ARHGEF12-201ENST00000356641 CHIC1Q5VXU3 224 aa11.59□□□□□ -0.55
ARHGEF12-201ENST00000356641 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF12-201ENST00000356641 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
ARHGEF12-201ENST00000356641 RANGAP1P46060 587 aaPredicted RBP11.46□□□□□ -0.58
ARHGEF12-201ENST00000356641 YTHDC1Q96MU7 727 aaKnown RBP11.27□□□□□ -0.6
ARHGEF12-201ENST00000356641 ZCCHC6Q5VYS8 1495 aaKnown RBP11.24□□□□□ -0.61
ARHGEF12-201ENST00000356641 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF12-201ENST00000356641 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
ARHGEF12-201ENST00000356641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF12-201ENST00000356641 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
ARHGEF12-201ENST00000356641 CLSPNQ9HAW4 1339 aa11.2□□□□□ -0.62
ARHGEF12-201ENST00000356641 DIEXFQ68CQ4 756 aaKnown RBP11.17□□□□□ -0.62
ARHGEF12-201ENST00000356641 ABCC9O60706 1549 aa11.17□□□□□ -0.62
ARHGEF12-201ENST00000356641 PPARGC1BQ86YN6 1023 aaKnown RBP11.14□□□□□ -0.63
ARHGEF12-201ENST00000356641 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
ARHGEF12-201ENST00000356641 ITGAEP38570 1179 aa11.14□□□□□ -0.63
ARHGEF12-201ENST00000356641 DCAF1Q9Y4B6 1507 aa11.14□□□□□ -0.63
ARHGEF12-201ENST00000356641 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
ARHGEF12-201ENST00000356641 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
ARHGEF12-201ENST00000356641 ACIN1Q9UKV3 1341 aaKnown RBP11.06□□□□□ -0.64
ARHGEF12-201ENST00000356641 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF12-201ENST00000356641 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
ARHGEF12-201ENST00000356641 RTL5Q5HYW3 569 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF12-201ENST00000356641 ANP32CO43423 234 aa11.04□□□□□ -0.64
ARHGEF12-201ENST00000356641 EEA1Q15075 1411 aa11.04□□□□□ -0.64
ARHGEF12-201ENST00000356641 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF12-201ENST00000356641 TRIM52Q96A61 297 aa11□□□□□ -0.65
ARHGEF12-201ENST00000356641 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
ARHGEF12-201ENST00000356641 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
ARHGEF12-201ENST00000356641 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
ARHGEF12-201ENST00000356641 NEUROD1Q13562 356 aa10.86□□□□□ -0.67
ARHGEF12-201ENST00000356641 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
ARHGEF12-201ENST00000356641 NACADO15069 1562 aa10.84□□□□□ -0.67
ARHGEF12-201ENST00000356641 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF12-201ENST00000356641 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
ARHGEF12-201ENST00000356641 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
ARHGEF12-201ENST00000356641 NEFMP07197 916 aa10.83□□□□□ -0.68
ARHGEF12-201ENST00000356641 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
ARHGEF12-201ENST00000356641 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
ARHGEF12-201ENST00000356641 CLIP1P30622 1438 aa10.77□□□□□ -0.69
ARHGEF12-201ENST00000356641 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.69
ARHGEF12-201ENST00000356641 ANP32AP39687 249 aaKnown RBP10.76□□□□□ -0.69
ARHGEF12-201ENST00000356641 TNIKQ9UKE5 1360 aa10.74□□□□□ -0.69
ARHGEF12-201ENST00000356641 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
ARHGEF12-201ENST00000356641 CANXP27824 592 aaKnown RBP10.72□□□□□ -0.69
ARHGEF12-201ENST00000356641 CEP164Q9UPV0 1460 aa10.72□□□□□ -0.69
ARHGEF12-201ENST00000356641 WRNQ14191 1432 aaPredicted RBP eCLIP10.69□□□□□ -0.7
ARHGEF12-201ENST00000356641 FBLN2P98095 1184 aa10.69□□□□□ -0.7
ARHGEF12-201ENST00000356641 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
ARHGEF12-201ENST00000356641 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF12-201ENST00000356641 BAZ1AQ9NRL2 1556 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF12-201ENST00000356641 CNGB1Q14028 1251 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF12-201ENST00000356641 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
ARHGEF12-201ENST00000356641 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
ARHGEF12-201ENST00000356641 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
ARHGEF12-201ENST00000356641 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
ARHGEF12-201ENST00000356641 TSPY4P0CV99 314 aa10.64□□□□□ -0.71
ARHGEF12-201ENST00000356641 TSPY10P0CW01 314 aa10.64□□□□□ -0.71
ARHGEF12-201ENST00000356641 MYO15BQ96JP2 1530 aa10.64□□□□□ -0.71
ARHGEF12-201ENST00000356641 UPF2Q9HAU5 1272 aaKnown RBP10.63□□□□□ -0.71
ARHGEF12-201ENST00000356641 BCANQ96GW7 911 aa10.63□□□□□ -0.71
ARHGEF12-201ENST00000356641 ZNF777Q9ULD5 760 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF12-201ENST00000356641 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
ARHGEF12-201ENST00000356641 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
ARHGEF12-201ENST00000356641 EIF5BO60841 1220 aaKnown RBP10.6□□□□□ -0.71
ARHGEF12-201ENST00000356641 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
ARHGEF12-201ENST00000356641 ESF1Q9H501 851 aaKnown RBP10.58□□□□□ -0.72
ARHGEF12-201ENST00000356641 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
ARHGEF12-201ENST00000356641 HNRNPUQ00839 825 aaKnown RBP eCLIP10.58□□□□□ -0.72
ARHGEF12-201ENST00000356641 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
ARHGEF12-201ENST00000356641 CDCA8Q53HL2 280 aa10.57□□□□□ -0.72
ARHGEF12-201ENST00000356641 SLC24A1O60721 1099 aa10.56□□□□□ -0.72
ARHGEF12-201ENST00000356641 FKBP8Q14318 412 aa10.55□□□□□ -0.72
ARHGEF12-201ENST00000356641 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
ARHGEF12-201ENST00000356641 WDR43Q15061 677 aaKnown RBP eCLIP10.53□□□□□ -0.72
ARHGEF12-201ENST00000356641 DDX10Q13206 875 aaKnown RBP10.52□□□□□ -0.72
ARHGEF12-201ENST00000356641 ANP32EQ9BTT0 268 aa10.52□□□□□ -0.73
ARHGEF12-201ENST00000356641 MRS2Q9HD23 443 aa10.52□□□□□ -0.73
ARHGEF12-201ENST00000356641 PLEKHD1A6NEE1 506 aa10.51□□□□□ -0.73
ARHGEF12-201ENST00000356641 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF12-201ENST00000356641 CCDC136Q96JN2 1154 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms