RNA–Protein interactions for RNA: ENST00000355426.7

EFEMP1-201, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-201ENST00000355426 NISCHQ9Y2I1 1504 aa30.81■■■□□ 2.52
EFEMP1-201ENST00000355426 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
EFEMP1-201ENST00000355426 ABCC9O60706 1549 aa27.01■■□□□ 1.92
EFEMP1-201ENST00000355426 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
EFEMP1-201ENST00000355426 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
EFEMP1-201ENST00000355426 NACADO15069 1562 aa25.81■■□□□ 1.72
EFEMP1-201ENST00000355426 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
EFEMP1-201ENST00000355426 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
EFEMP1-201ENST00000355426 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
EFEMP1-201ENST00000355426 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
EFEMP1-201ENST00000355426 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
EFEMP1-201ENST00000355426 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
EFEMP1-201ENST00000355426 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
EFEMP1-201ENST00000355426 SCRIBQ14160 1630 aa24.98■■□□□ 1.59
EFEMP1-201ENST00000355426 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
EFEMP1-201ENST00000355426 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
EFEMP1-201ENST00000355426 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
EFEMP1-201ENST00000355426 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
EFEMP1-201ENST00000355426 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
EFEMP1-201ENST00000355426 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
EFEMP1-201ENST00000355426 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
EFEMP1-201ENST00000355426 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
EFEMP1-201ENST00000355426 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
EFEMP1-201ENST00000355426 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
EFEMP1-201ENST00000355426 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
EFEMP1-201ENST00000355426 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
EFEMP1-201ENST00000355426 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
EFEMP1-201ENST00000355426 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
EFEMP1-201ENST00000355426 RSF1Q96T23 1441 aaPredicted RBP23.54■■□□□ 1.36
EFEMP1-201ENST00000355426 WIZO95785 1651 aa23.44■■□□□ 1.34
EFEMP1-201ENST00000355426 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
EFEMP1-201ENST00000355426 NESP48681 1621 aa23.34■■□□□ 1.33
EFEMP1-201ENST00000355426 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
EFEMP1-201ENST00000355426 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
EFEMP1-201ENST00000355426 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
EFEMP1-201ENST00000355426 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
EFEMP1-201ENST00000355426 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
EFEMP1-201ENST00000355426 CUX2O14529 1486 aa23.08■■□□□ 1.28
EFEMP1-201ENST00000355426 CFTRP13569 1480 aa23■■□□□ 1.27
EFEMP1-201ENST00000355426 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
EFEMP1-201ENST00000355426 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
EFEMP1-201ENST00000355426 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
EFEMP1-201ENST00000355426 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.26
EFEMP1-201ENST00000355426 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
EFEMP1-201ENST00000355426 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
EFEMP1-201ENST00000355426 WDR62O43379 1518 aa22.76■■□□□ 1.23
EFEMP1-201ENST00000355426 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
EFEMP1-201ENST00000355426 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
EFEMP1-201ENST00000355426 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.22
EFEMP1-201ENST00000355426 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
EFEMP1-201ENST00000355426 TOPBP1Q92547 1522 aa22.49■■□□□ 1.19
EFEMP1-201ENST00000355426 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
EFEMP1-201ENST00000355426 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
EFEMP1-201ENST00000355426 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
EFEMP1-201ENST00000355426 IFT140Q96RY7 1462 aa22.39■■□□□ 1.18
EFEMP1-201ENST00000355426 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.17
EFEMP1-201ENST00000355426 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
EFEMP1-201ENST00000355426 CUX1P39880 1505 aa22.27■■□□□ 1.16
EFEMP1-201ENST00000355426 SOGA1O94964 1423 aa22.25■■□□□ 1.15
EFEMP1-201ENST00000355426 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
EFEMP1-201ENST00000355426 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
EFEMP1-201ENST00000355426 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
EFEMP1-201ENST00000355426 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
EFEMP1-201ENST00000355426 AQRO60306 1485 aaKnown RBP eCLIP22.21■■□□□ 1.15
EFEMP1-201ENST00000355426 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
EFEMP1-201ENST00000355426 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
EFEMP1-201ENST00000355426 EIF4G3O43432 1585 aaKnown RBP22.15■■□□□ 1.14
EFEMP1-201ENST00000355426 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
EFEMP1-201ENST00000355426 EEA1Q15075 1411 aa22.1■■□□□ 1.13
EFEMP1-201ENST00000355426 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
EFEMP1-201ENST00000355426 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
EFEMP1-201ENST00000355426 WDR97A6NE52 1622 aa22■■□□□ 1.11
EFEMP1-201ENST00000355426 SYNJ1O43426 1573 aa22■■□□□ 1.11
EFEMP1-201ENST00000355426 FBLN2P98095 1184 aa21.99■■□□□ 1.11
EFEMP1-201ENST00000355426 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
EFEMP1-201ENST00000355426 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
EFEMP1-201ENST00000355426 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
EFEMP1-201ENST00000355426 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
EFEMP1-201ENST00000355426 SNAPC4Q5SXM2 1469 aa21.95■■□□□ 1.1
EFEMP1-201ENST00000355426 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
EFEMP1-201ENST00000355426 CHMP7Q8WUX9 453 aaPredicted RBP21.91■■□□□ 1.1
EFEMP1-201ENST00000355426 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
EFEMP1-201ENST00000355426 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
EFEMP1-201ENST00000355426 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
EFEMP1-201ENST00000355426 CHD1O14646 1710 aa21.86■■□□□ 1.09
EFEMP1-201ENST00000355426 RUSC2Q8N2Y8 1516 aa21.86■■□□□ 1.09
EFEMP1-201ENST00000355426 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
EFEMP1-201ENST00000355426 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
EFEMP1-201ENST00000355426 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.09
EFEMP1-201ENST00000355426 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
EFEMP1-201ENST00000355426 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
EFEMP1-201ENST00000355426 HRCP23327 699 aa21.76■■□□□ 1.07
EFEMP1-201ENST00000355426 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
EFEMP1-201ENST00000355426 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
EFEMP1-201ENST00000355426 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
EFEMP1-201ENST00000355426 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
EFEMP1-201ENST00000355426 KIF21BO75037 1637 aa21.72■■□□□ 1.07
EFEMP1-201ENST00000355426 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
EFEMP1-201ENST00000355426 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
EFEMP1-201ENST00000355426 CEP162Q5TB80 1403 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms