RNA–Protein interactions for RNA: ENST00000354402.9

APBB3-201, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5 BASIC

Gene APBB3, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-201ENST00000354402 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
APBB3-201ENST00000354402 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
APBB3-201ENST00000354402 ABCC9O60706 1549 aa28.15■■■□□ 2.1
APBB3-201ENST00000354402 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
APBB3-201ENST00000354402 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
APBB3-201ENST00000354402 NACADO15069 1562 aa26.9■■□□□ 1.9
APBB3-201ENST00000354402 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.86
APBB3-201ENST00000354402 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
APBB3-201ENST00000354402 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
APBB3-201ENST00000354402 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
APBB3-201ENST00000354402 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
APBB3-201ENST00000354402 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
APBB3-201ENST00000354402 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
APBB3-201ENST00000354402 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
APBB3-201ENST00000354402 DNAJC5BQ9UF47 199 aa26.02■■□□□ 1.76
APBB3-201ENST00000354402 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
APBB3-201ENST00000354402 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
APBB3-201ENST00000354402 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
APBB3-201ENST00000354402 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
APBB3-201ENST00000354402 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
APBB3-201ENST00000354402 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
APBB3-201ENST00000354402 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
APBB3-201ENST00000354402 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
APBB3-201ENST00000354402 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
APBB3-201ENST00000354402 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
APBB3-201ENST00000354402 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
APBB3-201ENST00000354402 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
APBB3-201ENST00000354402 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
APBB3-201ENST00000354402 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
APBB3-201ENST00000354402 WIZO95785 1651 aa24.45■■□□□ 1.5
APBB3-201ENST00000354402 CHIC1Q5VXU3 224 aa24.33■■□□□ 1.48
APBB3-201ENST00000354402 NESP48681 1621 aa24.31■■□□□ 1.48
APBB3-201ENST00000354402 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
APBB3-201ENST00000354402 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
APBB3-201ENST00000354402 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
APBB3-201ENST00000354402 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
APBB3-201ENST00000354402 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
APBB3-201ENST00000354402 CUX2O14529 1486 aa24.02■■□□□ 1.44
APBB3-201ENST00000354402 HRCP23327 699 aa24■■□□□ 1.43
APBB3-201ENST00000354402 CFTRP13569 1480 aa23.97■■□□□ 1.43
APBB3-201ENST00000354402 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
APBB3-201ENST00000354402 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
APBB3-201ENST00000354402 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
APBB3-201ENST00000354402 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
APBB3-201ENST00000354402 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
APBB3-201ENST00000354402 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
APBB3-201ENST00000354402 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
APBB3-201ENST00000354402 WDR62O43379 1518 aa23.71■■□□□ 1.39
APBB3-201ENST00000354402 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
APBB3-201ENST00000354402 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
APBB3-201ENST00000354402 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
APBB3-201ENST00000354402 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
APBB3-201ENST00000354402 ABCC8Q09428 1581 aa23.45■■□□□ 1.35
APBB3-201ENST00000354402 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
APBB3-201ENST00000354402 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
APBB3-201ENST00000354402 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
APBB3-201ENST00000354402 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
APBB3-201ENST00000354402 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
APBB3-201ENST00000354402 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
APBB3-201ENST00000354402 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
APBB3-201ENST00000354402 ZNF608Q9ULD9 1512 aaPredicted RBP23.26■■□□□ 1.31
APBB3-201ENST00000354402 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
APBB3-201ENST00000354402 CUX1P39880 1505 aa23.22■■□□□ 1.31
APBB3-201ENST00000354402 SOGA1O94964 1423 aa23.2■■□□□ 1.31
APBB3-201ENST00000354402 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
APBB3-201ENST00000354402 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
APBB3-201ENST00000354402 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
APBB3-201ENST00000354402 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
APBB3-201ENST00000354402 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.32e-6■■■■■ 39.8
APBB3-201ENST00000354402 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
APBB3-201ENST00000354402 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
APBB3-201ENST00000354402 EEA1Q15075 1411 aa23.12■■□□□ 1.29
APBB3-201ENST00000354402 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
APBB3-201ENST00000354402 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
APBB3-201ENST00000354402 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
APBB3-201ENST00000354402 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
APBB3-201ENST00000354402 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
APBB3-201ENST00000354402 FBLN2P98095 1184 aa22.98■■□□□ 1.27
APBB3-201ENST00000354402 CSRNP3Q8WYN3 585 aa22.98■■□□□ 1.27
APBB3-201ENST00000354402 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
APBB3-201ENST00000354402 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
APBB3-201ENST00000354402 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
APBB3-201ENST00000354402 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
APBB3-201ENST00000354402 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
APBB3-201ENST00000354402 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
APBB3-201ENST00000354402 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
APBB3-201ENST00000354402 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
APBB3-201ENST00000354402 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
APBB3-201ENST00000354402 CHD1O14646 1710 aa22.8■■□□□ 1.24
APBB3-201ENST00000354402 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
APBB3-201ENST00000354402 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
APBB3-201ENST00000354402 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
APBB3-201ENST00000354402 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
APBB3-201ENST00000354402 KIF21BO75037 1637 aa22.75■■□□□ 1.23
APBB3-201ENST00000354402 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
APBB3-201ENST00000354402 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
APBB3-201ENST00000354402 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
APBB3-201ENST00000354402 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
APBB3-201ENST00000354402 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
APBB3-201ENST00000354402 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms