RNA–Protein interactions for RNA: ENST00000338790.4

TBC1D3P4-201, Transcript of TBC1 domain family member 3 pseudogene 4, humanhuman

BASIC

Gene TBC1D3P4, Length 1,075 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3P4-201ENST00000338790 AEBP2Q6ZN18 517 aaPredicted RBP31.1■■■□□ 2.57
TBC1D3P4-201ENST00000338790 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
TBC1D3P4-201ENST00000338790 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
TBC1D3P4-201ENST00000338790 NISCHQ9Y2I1 1504 aa26.25■■□□□ 1.79
TBC1D3P4-201ENST00000338790 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
TBC1D3P4-201ENST00000338790 FOXD1Q16676 465 aa24.5■■□□□ 1.51
TBC1D3P4-201ENST00000338790 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
TBC1D3P4-201ENST00000338790 ABCC9O60706 1549 aa23.93■■□□□ 1.42
TBC1D3P4-201ENST00000338790 CCDC180Q9P1Z9 1646 aa23.75■■□□□ 1.39
TBC1D3P4-201ENST00000338790 PPP6R1Q9UPN7 881 aa23.47■■□□□ 1.35
TBC1D3P4-201ENST00000338790 ADRA2BP18089 450 aa23.4■■□□□ 1.34
TBC1D3P4-201ENST00000338790 PIAS4Q8N2W9 510 aaPredicted RBP22.99■■□□□ 1.27
TBC1D3P4-201ENST00000338790 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
TBC1D3P4-201ENST00000338790 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
TBC1D3P4-201ENST00000338790 MSH5O43196 834 aa22.52■■□□□ 1.2
TBC1D3P4-201ENST00000338790 NACADO15069 1562 aa22.5■■□□□ 1.19
TBC1D3P4-201ENST00000338790 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
TBC1D3P4-201ENST00000338790 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
TBC1D3P4-201ENST00000338790 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
TBC1D3P4-201ENST00000338790 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
TBC1D3P4-201ENST00000338790 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
TBC1D3P4-201ENST00000338790 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
TBC1D3P4-201ENST00000338790 DCAF1Q9Y4B6 1507 aa21.73■■□□□ 1.07
TBC1D3P4-201ENST00000338790 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
TBC1D3P4-201ENST00000338790 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
TBC1D3P4-201ENST00000338790 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
TBC1D3P4-201ENST00000338790 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
TBC1D3P4-201ENST00000338790 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
TBC1D3P4-201ENST00000338790 PPP4R3CPQ6ZMV5 832 aa21.38■■□□□ 1.01
TBC1D3P4-201ENST00000338790 MAPK8IP2Q13387 824 aaPredicted RBP21.32■■□□□ 1
TBC1D3P4-201ENST00000338790 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
TBC1D3P4-201ENST00000338790 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
TBC1D3P4-201ENST00000338790 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
TBC1D3P4-201ENST00000338790 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
TBC1D3P4-201ENST00000338790 CUX2O14529 1486 aa20.82■□□□□ 0.92
TBC1D3P4-201ENST00000338790 CNKSR2Q8WXI2 1034 aa20.77■□□□□ 0.92
TBC1D3P4-201ENST00000338790 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
TBC1D3P4-201ENST00000338790 KCNA4P22459 653 aa20.72■□□□□ 0.91
TBC1D3P4-201ENST00000338790 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
TBC1D3P4-201ENST00000338790 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
TBC1D3P4-201ENST00000338790 NCBP3Q53F19 620 aaKnown RBP20.62■□□□□ 0.89
TBC1D3P4-201ENST00000338790 SMARCA2P51531 1590 aa20.6■□□□□ 0.89
TBC1D3P4-201ENST00000338790 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
TBC1D3P4-201ENST00000338790 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
TBC1D3P4-201ENST00000338790 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
TBC1D3P4-201ENST00000338790 NESP48681 1621 aa20.46■□□□□ 0.87
TBC1D3P4-201ENST00000338790 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
TBC1D3P4-201ENST00000338790 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
TBC1D3P4-201ENST00000338790 RNF216Q9NWF9 866 aaPredicted RBP20.42■□□□□ 0.86
TBC1D3P4-201ENST00000338790 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
TBC1D3P4-201ENST00000338790 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
TBC1D3P4-201ENST00000338790 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
TBC1D3P4-201ENST00000338790 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
TBC1D3P4-201ENST00000338790 PDS5BQ9NTI5 1447 aa20.24■□□□□ 0.83
TBC1D3P4-201ENST00000338790 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
TBC1D3P4-201ENST00000338790 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
TBC1D3P4-201ENST00000338790 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
TBC1D3P4-201ENST00000338790 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
TBC1D3P4-201ENST00000338790 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
TBC1D3P4-201ENST00000338790 WDR62O43379 1518 aa20.03■□□□□ 0.8
TBC1D3P4-201ENST00000338790 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
TBC1D3P4-201ENST00000338790 WIZO95785 1651 aa19.93■□□□□ 0.78
TBC1D3P4-201ENST00000338790 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
TBC1D3P4-201ENST00000338790 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
TBC1D3P4-201ENST00000338790 CFTRP13569 1480 aa19.81■□□□□ 0.76
TBC1D3P4-201ENST00000338790 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
TBC1D3P4-201ENST00000338790 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
TBC1D3P4-201ENST00000338790 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
TBC1D3P4-201ENST00000338790 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
TBC1D3P4-201ENST00000338790 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
TBC1D3P4-201ENST00000338790 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
TBC1D3P4-201ENST00000338790 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
TBC1D3P4-201ENST00000338790 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
TBC1D3P4-201ENST00000338790 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
TBC1D3P4-201ENST00000338790 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
TBC1D3P4-201ENST00000338790 ZNF608Q9ULD9 1512 aaPredicted RBP19.5■□□□□ 0.71
TBC1D3P4-201ENST00000338790 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
TBC1D3P4-201ENST00000338790 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
TBC1D3P4-201ENST00000338790 SLC4A2P04920 1241 aa19.45■□□□□ 0.7
TBC1D3P4-201ENST00000338790 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
TBC1D3P4-201ENST00000338790 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
TBC1D3P4-201ENST00000338790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
TBC1D3P4-201ENST00000338790 EIF4G3O43432 1585 aaKnown RBP19.41■□□□□ 0.7
TBC1D3P4-201ENST00000338790 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
TBC1D3P4-201ENST00000338790 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
TBC1D3P4-201ENST00000338790 CHD1O14646 1710 aa19.33■□□□□ 0.68
TBC1D3P4-201ENST00000338790 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
TBC1D3P4-201ENST00000338790 CYB5RLQ6IPT4 315 aa19.29■□□□□ 0.68
TBC1D3P4-201ENST00000338790 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
TBC1D3P4-201ENST00000338790 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
TBC1D3P4-201ENST00000338790 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
TBC1D3P4-201ENST00000338790 FBLN2P98095 1184 aa19.19■□□□□ 0.66
TBC1D3P4-201ENST00000338790 U3KPZ7 1027 aaPredicted RBP19.19■□□□□ 0.66
TBC1D3P4-201ENST00000338790 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
TBC1D3P4-201ENST00000338790 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
TBC1D3P4-201ENST00000338790 ZBTB22O15209 634 aa19.14■□□□□ 0.65
TBC1D3P4-201ENST00000338790 SOGA1O94964 1423 aa19.13■□□□□ 0.65
TBC1D3P4-201ENST00000338790 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
TBC1D3P4-201ENST00000338790 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
TBC1D3P4-201ENST00000338790 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms