RNA–Protein interactions for RNA: ENST00000335858.11

RAD51D-201, Transcript of RAD51 paralog D, humanhuman

TSL 1 (best) BASIC

Gene RAD51D, Length 1,353 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-201ENST00000335858 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
RAD51D-201ENST00000335858 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
RAD51D-201ENST00000335858 ABCC9O60706 1549 aa34.72■■■■□ 3.15
RAD51D-201ENST00000335858 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
RAD51D-201ENST00000335858 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.92
RAD51D-201ENST00000335858 NACADO15069 1562 aa33.22■■■□□ 2.91
RAD51D-201ENST00000335858 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
RAD51D-201ENST00000335858 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
RAD51D-201ENST00000335858 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
RAD51D-201ENST00000335858 UNC13AQ9UPW8 1703 aa32.5■■■□□ 2.79
RAD51D-201ENST00000335858 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
RAD51D-201ENST00000335858 BICRAQ9NZM4 1560 aa32.35■■■□□ 2.77
RAD51D-201ENST00000335858 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
RAD51D-201ENST00000335858 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
RAD51D-201ENST00000335858 SHROOM4Q9ULL8 1493 aa31.89■■■□□ 2.7
RAD51D-201ENST00000335858 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
RAD51D-201ENST00000335858 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
RAD51D-201ENST00000335858 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.58
RAD51D-201ENST00000335858 SMARCA4P51532 1647 aa30.78■■■□□ 2.52
RAD51D-201ENST00000335858 NCAPD3P42695 1498 aa30.72■■■□□ 2.51
RAD51D-201ENST00000335858 BAZ1AQ9NRL2 1556 aaPredicted RBP30.72■■■□□ 2.51
RAD51D-201ENST00000335858 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
RAD51D-201ENST00000335858 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
RAD51D-201ENST00000335858 SMARCA2P51531 1590 aa30.59■■■□□ 2.49
RAD51D-201ENST00000335858 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
RAD51D-201ENST00000335858 HMGXB3Q12766 1538 aa30.48■■■□□ 2.47
RAD51D-201ENST00000335858 RSF1Q96T23 1441 aaPredicted RBP30.43■■■□□ 2.46
RAD51D-201ENST00000335858 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
RAD51D-201ENST00000335858 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.45
RAD51D-201ENST00000335858 WIZO95785 1651 aa30.23■■■□□ 2.43
RAD51D-201ENST00000335858 NESP48681 1621 aa30.03■■■□□ 2.4
RAD51D-201ENST00000335858 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
RAD51D-201ENST00000335858 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
RAD51D-201ENST00000335858 LAMC3Q9Y6N6 1575 aa29.85■■■□□ 2.37
RAD51D-201ENST00000335858 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
RAD51D-201ENST00000335858 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
RAD51D-201ENST00000335858 CUX2O14529 1486 aa29.62■■■□□ 2.33
RAD51D-201ENST00000335858 CFTRP13569 1480 aa29.61■■■□□ 2.33
RAD51D-201ENST00000335858 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
RAD51D-201ENST00000335858 KIF21AQ7Z4S6 1674 aa29.57■■■□□ 2.32
RAD51D-201ENST00000335858 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
RAD51D-201ENST00000335858 FANCD2Q9BXW9 1451 aa29.44■■■□□ 2.3
RAD51D-201ENST00000335858 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
RAD51D-201ENST00000335858 CEP164Q9UPV0 1460 aa29.38■■■□□ 2.29
RAD51D-201ENST00000335858 WDR62O43379 1518 aa29.28■■■□□ 2.28
RAD51D-201ENST00000335858 PRDM2Q13029 1718 aa29.21■■■□□ 2.27
RAD51D-201ENST00000335858 URB2Q14146 1524 aaKnown RBP29.17■■■□□ 2.26
RAD51D-201ENST00000335858 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
RAD51D-201ENST00000335858 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
RAD51D-201ENST00000335858 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
RAD51D-201ENST00000335858 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
RAD51D-201ENST00000335858 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
RAD51D-201ENST00000335858 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
RAD51D-201ENST00000335858 ZNF608Q9ULD9 1512 aaPredicted RBP28.72■■■□□ 2.19
RAD51D-201ENST00000335858 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.19
RAD51D-201ENST00000335858 CUX1P39880 1505 aa28.7■■■□□ 2.18
RAD51D-201ENST00000335858 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.185e-11■■■■■ 40
RAD51D-201ENST00000335858 TARBP1Q13395 1621 aaKnown RBP28.64■■■□□ 2.18
RAD51D-201ENST00000335858 TRIM41Q8WV44 630 aa28.62■■■□□ 2.17
RAD51D-201ENST00000335858 SOGA1O94964 1423 aa28.62■■■□□ 2.17
RAD51D-201ENST00000335858 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
RAD51D-201ENST00000335858 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
RAD51D-201ENST00000335858 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
RAD51D-201ENST00000335858 AQRO60306 1485 aaKnown RBP eCLIP28.56■■■□□ 2.164e-7■■■■□ 26
RAD51D-201ENST00000335858 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
RAD51D-201ENST00000335858 TOP2BQ02880 1626 aa28.5■■■□□ 2.15
RAD51D-201ENST00000335858 TDRD9Q8NDG6 1382 aaKnown RBP28.49■■■□□ 2.15
RAD51D-201ENST00000335858 BIVM-ERCC5R4GMW8 1640 aa28.49■■■□□ 2.15
RAD51D-201ENST00000335858 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
RAD51D-201ENST00000335858 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
RAD51D-201ENST00000335858 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
RAD51D-201ENST00000335858 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
RAD51D-201ENST00000335858 GAPVD1Q14C86 1478 aa28.25■■■□□ 2.11
RAD51D-201ENST00000335858 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
RAD51D-201ENST00000335858 FBLN2P98095 1184 aa28.23■■■□□ 2.11
RAD51D-201ENST00000335858 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
RAD51D-201ENST00000335858 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
RAD51D-201ENST00000335858 CHD1O14646 1710 aa28.16■■■□□ 2.1
RAD51D-201ENST00000335858 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
RAD51D-201ENST00000335858 PBRM1Q86U86 1689 aa28.11■■■□□ 2.09
RAD51D-201ENST00000335858 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
RAD51D-201ENST00000335858 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
RAD51D-201ENST00000335858 EEA1Q15075 1411 aa28.06■■■□□ 2.08
RAD51D-201ENST00000335858 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
RAD51D-201ENST00000335858 ERICH3Q5RHP9 1530 aa27.96■■■□□ 2.07
RAD51D-201ENST00000335858 KIF27Q86VH2 1401 aa27.96■■■□□ 2.07
RAD51D-201ENST00000335858 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
RAD51D-201ENST00000335858 RIMBP3CA6NJZ7 1639 aa27.93■■■□□ 2.06
RAD51D-201ENST00000335858 RIMBP3BA6NNM3 1639 aa27.93■■■□□ 2.06
RAD51D-201ENST00000335858 RIMBP3Q9UFD9 1639 aa27.93■■■□□ 2.06
RAD51D-201ENST00000335858 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
RAD51D-201ENST00000335858 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
RAD51D-201ENST00000335858 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
RAD51D-201ENST00000335858 CSRNP3Q8WYN3 585 aa27.89■■■□□ 2.06
RAD51D-201ENST00000335858 GRIN2AQ12879 1464 aa27.89■■■□□ 2.05
RAD51D-201ENST00000335858 IGF1RP08069 1367 aa27.86■■■□□ 2.05
RAD51D-201ENST00000335858 NUP160Q12769 1436 aa27.8■■■□□ 2.04
RAD51D-201ENST00000335858 LOC105371045A0A1W2PR82 267 aa27.77■■■□□ 2.04
RAD51D-201ENST00000335858 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
RAD51D-201ENST00000335858 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms