RNA–Protein interactions for RNA: ENST00000320139.5

PMF1-BGLAP-201, Transcript of PMF1-BGLAP readthrough, humanhuman

TSL 1 (best) BASIC

Gene PMF1-BGLAP, Length 773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-BGLAP-201ENST00000320139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.23□□□□□ -0.295e-26■■■■■ 153.1
PMF1-BGLAP-201ENST00000320139 SF3B1O75533 1304 aaKnown RBP eCLIP13.33□□□□□ -0.285e-10■■■■■ 120.6
PMF1-BGLAP-201ENST00000320139 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.353e-8■■■■■ 71.2
PMF1-BGLAP-201ENST00000320139 PCBP1Q15365 356 aaKnown RBP eCLIP13.61□□□□□ -0.231e-7■■■■■ 54.9
PMF1-BGLAP-201ENST00000320139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.99□□□□□ -0.337e-11■■■■■ 48.1
PMF1-BGLAP-201ENST00000320139 DKC1O60832 514 aaKnown RBP eCLIP13.78□□□□□ -0.26e-15■■■■■ 44.9
PMF1-BGLAP-201ENST00000320139 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.25□□□□□ -0.133e-7■■■■■ 42.1
PMF1-BGLAP-201ENST00000320139 NIP7Q9Y221 180 aaKnown RBP eCLIP15.79■□□□□ 0.127e-6■■■■■ 33.4
PMF1-BGLAP-201ENST00000320139 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.989e-8■■■■■ 32
PMF1-BGLAP-201ENST00000320139 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.343e-7■■■■■ 30.9
PMF1-BGLAP-201ENST00000320139 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.336e-9■■■■■ 30.1
PMF1-BGLAP-201ENST00000320139 ILF3Q12906 894 aaKnown RBP eCLIP12.15□□□□□ -0.464e-7■■■■□ 23.9
PMF1-BGLAP-201ENST00000320139 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■■■□ 21.8
PMF1-BGLAP-201ENST00000320139 LARP4Q71RC2 724 aaKnown RBP eCLIP11.83□□□□□ -0.526e-7■■■■□ 20.9
PMF1-BGLAP-201ENST00000320139 DDX6P26196 483 aaKnown RBP eCLIP13□□□□□ -0.331e-6■■■□□ 18.3
PMF1-BGLAP-201ENST00000320139 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.56e-6■■■□□ 17.9
PMF1-BGLAP-201ENST00000320139 SF3B4Q15427 424 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■□□ 15.6
PMF1-BGLAP-201ENST00000320139 PPIGQ13427 754 aaKnown RBP eCLIP13.86□□□□□ -0.194e-7■■■□□ 15.2
PMF1-BGLAP-201ENST00000320139 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■□□ 15
PMF1-BGLAP-201ENST00000320139 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.071e-8■■■□□ 15
PMF1-BGLAP-201ENST00000320139 PCBP2Q15366 365 aaKnown RBP eCLIP11.85□□□□□ -0.511e-6■■□□□ 13.6
PMF1-BGLAP-201ENST00000320139 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■□□□ 13.6
PMF1-BGLAP-201ENST00000320139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.2□□□□□ -0.464e-10■■□□□ 13.4
PMF1-BGLAP-201ENST00000320139 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.214e-8■■□□□ 13
PMF1-BGLAP-201ENST00000320139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.38□□□□□ -0.753e-7■■□□□ 12.8
PMF1-BGLAP-201ENST00000320139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.61□□□□□ -0.237e-21■■□□□ 12.3
PMF1-BGLAP-201ENST00000320139 SSBP05455 408 aaKnown RBP eCLIP13.51□□□□□ -0.254e-6■□□□□ 10.9
Retrieved 27 of 27 RNA–protein pairs in 7.7 ms