RNA–Protein interactions for RNA: ENST00000319136.8

APOL1-201, Transcript of apolipoprotein L1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APOL1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-201ENST00000319136 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
APOL1-201ENST00000319136 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
APOL1-201ENST00000319136 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
APOL1-201ENST00000319136 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
APOL1-201ENST00000319136 NACADO15069 1562 aa17.99■□□□□ 0.47
APOL1-201ENST00000319136 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
APOL1-201ENST00000319136 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
APOL1-201ENST00000319136 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
APOL1-201ENST00000319136 UNC13AQ9UPW8 1703 aa17.6■□□□□ 0.41
APOL1-201ENST00000319136 ABCC9O60706 1549 aa17.43■□□□□ 0.38
APOL1-201ENST00000319136 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
APOL1-201ENST00000319136 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
APOL1-201ENST00000319136 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
APOL1-201ENST00000319136 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
APOL1-201ENST00000319136 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
APOL1-201ENST00000319136 EIF4G1Q04637 1599 aaKnown RBP16.59■□□□□ 0.25
APOL1-201ENST00000319136 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
APOL1-201ENST00000319136 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
APOL1-201ENST00000319136 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
APOL1-201ENST00000319136 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
APOL1-201ENST00000319136 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
APOL1-201ENST00000319136 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
APOL1-201ENST00000319136 MYT1Q01538 1121 aa16.35■□□□□ 0.21
APOL1-201ENST00000319136 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
APOL1-201ENST00000319136 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
APOL1-201ENST00000319136 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
APOL1-201ENST00000319136 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
APOL1-201ENST00000319136 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
APOL1-201ENST00000319136 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
APOL1-201ENST00000319136 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
APOL1-201ENST00000319136 PRKCSHP14314 528 aaPredicted RBP15.95■□□□□ 0.14
APOL1-201ENST00000319136 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
APOL1-201ENST00000319136 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
APOL1-201ENST00000319136 WIZO95785 1651 aa15.88■□□□□ 0.13
APOL1-201ENST00000319136 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
APOL1-201ENST00000319136 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
APOL1-201ENST00000319136 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
APOL1-201ENST00000319136 CUX2O14529 1486 aa15.77■□□□□ 0.12
APOL1-201ENST00000319136 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.115e-7■■■□□ 19.1
APOL1-201ENST00000319136 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
APOL1-201ENST00000319136 CFTRP13569 1480 aa15.72■□□□□ 0.11
APOL1-201ENST00000319136 WDR62O43379 1518 aa15.72■□□□□ 0.11
APOL1-201ENST00000319136 APLP2Q06481 763 aa15.7■□□□□ 0.1
APOL1-201ENST00000319136 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
APOL1-201ENST00000319136 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
APOL1-201ENST00000319136 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
APOL1-201ENST00000319136 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
APOL1-201ENST00000319136 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
APOL1-201ENST00000319136 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
APOL1-201ENST00000319136 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
APOL1-201ENST00000319136 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
APOL1-201ENST00000319136 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
APOL1-201ENST00000319136 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
APOL1-201ENST00000319136 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
APOL1-201ENST00000319136 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
APOL1-201ENST00000319136 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
APOL1-201ENST00000319136 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
APOL1-201ENST00000319136 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
APOL1-201ENST00000319136 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
APOL1-201ENST00000319136 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
APOL1-201ENST00000319136 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
APOL1-201ENST00000319136 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
APOL1-201ENST00000319136 NESP48681 1621 aa15.2■□□□□ 0.02
APOL1-201ENST00000319136 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
APOL1-201ENST00000319136 CUX1P39880 1505 aa15.12■□□□□ 0.01
APOL1-201ENST00000319136 CUL7Q14999 1698 aa15.11■□□□□ 0.01
APOL1-201ENST00000319136 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
APOL1-201ENST00000319136 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
APOL1-201ENST00000319136 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
APOL1-201ENST00000319136 SHROOM2Q13796 1616 aa15.03■□□□□ -0
APOL1-201ENST00000319136 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
APOL1-201ENST00000319136 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
APOL1-201ENST00000319136 SYNJ1O43426 1573 aa15□□□□□ -0.01
APOL1-201ENST00000319136 ADAMTS12P58397 1594 aa14.99□□□□□ -0.01
APOL1-201ENST00000319136 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
APOL1-201ENST00000319136 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
APOL1-201ENST00000319136 PLPPR3Q6T4P5 718 aa14.94□□□□□ -0.02
APOL1-201ENST00000319136 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
APOL1-201ENST00000319136 CHD1O14646 1710 aa14.93□□□□□ -0.02
APOL1-201ENST00000319136 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
APOL1-201ENST00000319136 EIF5BO60841 1220 aaKnown RBP14.85□□□□□ -0.03
APOL1-201ENST00000319136 GRIN2BQ13224 1484 aa14.85□□□□□ -0.03
APOL1-201ENST00000319136 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
APOL1-201ENST00000319136 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
APOL1-201ENST00000319136 CTTNBP2Q8WZ74 1663 aa14.82□□□□□ -0.04
APOL1-201ENST00000319136 EEA1Q15075 1411 aa14.8□□□□□ -0.04
APOL1-201ENST00000319136 SYNJ2O15056 1496 aa14.8□□□□□ -0.04
APOL1-201ENST00000319136 BCL11AQ9H165 835 aa14.79□□□□□ -0.04
APOL1-201ENST00000319136 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
APOL1-201ENST00000319136 NUP160Q12769 1436 aa14.76□□□□□ -0.05
APOL1-201ENST00000319136 KIF21BO75037 1637 aa14.76□□□□□ -0.05
APOL1-201ENST00000319136 SOGA1O94964 1423 aa14.72□□□□□ -0.05
APOL1-201ENST00000319136 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
APOL1-201ENST00000319136 FHAD1B1AJZ9 1412 aa14.7□□□□□ -0.06
APOL1-201ENST00000319136 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
APOL1-201ENST00000319136 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
APOL1-201ENST00000319136 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
APOL1-201ENST00000319136 UGGT2Q9NYU1 1516 aa14.62□□□□□ -0.07
APOL1-201ENST00000319136 SUPT5HO00267 1087 aaKnown RBP14.61□□□□□ -0.07
APOL1-201ENST00000319136 SNAPC4Q5SXM2 1469 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms