RNA–Protein interactions for RNA: ENST00000316428.9

LRRC31-202, Transcript of leucine rich repeat containing 31, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRC31, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC31-202ENST00000316428 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
LRRC31-202ENST00000316428 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
LRRC31-202ENST00000316428 ABCC9O60706 1549 aa13.41□□□□□ -0.26
LRRC31-202ENST00000316428 POTEDQ86YR6 584 aa12.98□□□□□ -0.33
LRRC31-202ENST00000316428 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
LRRC31-202ENST00000316428 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
LRRC31-202ENST00000316428 NACADO15069 1562 aa12.79□□□□□ -0.36
LRRC31-202ENST00000316428 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
LRRC31-202ENST00000316428 MYO15BQ96JP2 1530 aa12.64□□□□□ -0.39
LRRC31-202ENST00000316428 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
LRRC31-202ENST00000316428 DCAF1Q9Y4B6 1507 aa12.56□□□□□ -0.4
LRRC31-202ENST00000316428 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRRC31-202ENST00000316428 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
LRRC31-202ENST00000316428 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
LRRC31-202ENST00000316428 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
LRRC31-202ENST00000316428 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
LRRC31-202ENST00000316428 EIF4G1Q04637 1599 aaKnown RBP12.14□□□□□ -0.47
LRRC31-202ENST00000316428 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
LRRC31-202ENST00000316428 CECR2Q9BXF3 1484 aa12.05□□□□□ -0.48
LRRC31-202ENST00000316428 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
LRRC31-202ENST00000316428 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
LRRC31-202ENST00000316428 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
LRRC31-202ENST00000316428 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
LRRC31-202ENST00000316428 SMARCA2P51531 1590 aa11.78□□□□□ -0.52
LRRC31-202ENST00000316428 NCAPD3P42695 1498 aa11.78□□□□□ -0.52
LRRC31-202ENST00000316428 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
LRRC31-202ENST00000316428 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
LRRC31-202ENST00000316428 CHIC1Q5VXU3 224 aa11.72□□□□□ -0.53
LRRC31-202ENST00000316428 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.54
LRRC31-202ENST00000316428 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
LRRC31-202ENST00000316428 WIZO95785 1651 aa11.62□□□□□ -0.55
LRRC31-202ENST00000316428 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
LRRC31-202ENST00000316428 NESP48681 1621 aa11.56□□□□□ -0.56
LRRC31-202ENST00000316428 HRCP23327 699 aa11.55□□□□□ -0.56
LRRC31-202ENST00000316428 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
LRRC31-202ENST00000316428 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
LRRC31-202ENST00000316428 TOP2AP11388 1531 aaKnown RBP11.47□□□□□ -0.57
LRRC31-202ENST00000316428 CUX2O14529 1486 aa11.46□□□□□ -0.58
LRRC31-202ENST00000316428 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
LRRC31-202ENST00000316428 CADPSQ9ULU8 1353 aa11.44□□□□□ -0.58
LRRC31-202ENST00000316428 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
LRRC31-202ENST00000316428 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
LRRC31-202ENST00000316428 THOC2Q8NI27 1593 aaKnown RBP11.42□□□□□ -0.58
LRRC31-202ENST00000316428 CFTRP13569 1480 aa11.35□□□□□ -0.59
LRRC31-202ENST00000316428 CEP164Q9UPV0 1460 aa11.34□□□□□ -0.59
LRRC31-202ENST00000316428 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
LRRC31-202ENST00000316428 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
LRRC31-202ENST00000316428 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
LRRC31-202ENST00000316428 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
LRRC31-202ENST00000316428 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
LRRC31-202ENST00000316428 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
LRRC31-202ENST00000316428 WDR62O43379 1518 aa11.29□□□□□ -0.6
LRRC31-202ENST00000316428 TRIM41Q8WV44 630 aa11.26□□□□□ -0.61
LRRC31-202ENST00000316428 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
LRRC31-202ENST00000316428 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
LRRC31-202ENST00000316428 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.61
LRRC31-202ENST00000316428 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
LRRC31-202ENST00000316428 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
LRRC31-202ENST00000316428 DNMBPQ6XZF7 1577 aa11.12□□□□□ -0.63
LRRC31-202ENST00000316428 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
LRRC31-202ENST00000316428 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
LRRC31-202ENST00000316428 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
LRRC31-202ENST00000316428 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
LRRC31-202ENST00000316428 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
LRRC31-202ENST00000316428 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
LRRC31-202ENST00000316428 AEBP2Q6ZN18 517 aaPredicted RBP11.03□□□□□ -0.64
LRRC31-202ENST00000316428 EIF4G3O43432 1585 aaKnown RBP11.02□□□□□ -0.64
LRRC31-202ENST00000316428 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.65
LRRC31-202ENST00000316428 CUX1P39880 1505 aa11.01□□□□□ -0.65
LRRC31-202ENST00000316428 MYT1Q01538 1121 aa11.01□□□□□ -0.65
LRRC31-202ENST00000316428 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
LRRC31-202ENST00000316428 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
LRRC31-202ENST00000316428 SOGA1O94964 1423 aa10.98□□□□□ -0.65
LRRC31-202ENST00000316428 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.65
LRRC31-202ENST00000316428 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
LRRC31-202ENST00000316428 TDRD9Q8NDG6 1382 aaKnown RBP10.94□□□□□ -0.66
LRRC31-202ENST00000316428 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
LRRC31-202ENST00000316428 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
LRRC31-202ENST00000316428 CHD1O14646 1710 aa10.91□□□□□ -0.66
LRRC31-202ENST00000316428 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.66
LRRC31-202ENST00000316428 BIVM-ERCC5R4GMW8 1640 aa10.9□□□□□ -0.66
LRRC31-202ENST00000316428 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
LRRC31-202ENST00000316428 FBLN2P98095 1184 aa10.89□□□□□ -0.67
LRRC31-202ENST00000316428 TOP2BQ02880 1626 aa10.89□□□□□ -0.67
LRRC31-202ENST00000316428 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
LRRC31-202ENST00000316428 PBRM1Q86U86 1689 aa10.88□□□□□ -0.67
LRRC31-202ENST00000316428 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
LRRC31-202ENST00000316428 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
LRRC31-202ENST00000316428 GAPVD1Q14C86 1478 aa10.86□□□□□ -0.67
LRRC31-202ENST00000316428 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
LRRC31-202ENST00000316428 EEA1Q15075 1411 aa10.85□□□□□ -0.67
LRRC31-202ENST00000316428 MAGI1Q96QZ7 1491 aaPredicted RBP10.85□□□□□ -0.67
LRRC31-202ENST00000316428 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
LRRC31-202ENST00000316428 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
LRRC31-202ENST00000316428 RIMBP3CA6NJZ7 1639 aa10.82□□□□□ -0.68
LRRC31-202ENST00000316428 RIMBP3BA6NNM3 1639 aa10.82□□□□□ -0.68
LRRC31-202ENST00000316428 RIMBP3Q9UFD9 1639 aa10.82□□□□□ -0.68
LRRC31-202ENST00000316428 TTBK1Q5TCY1 1321 aaPredicted RBP10.82□□□□□ -0.68
LRRC31-202ENST00000316428 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
LRRC31-202ENST00000316428 ARHGEF11O15085 1522 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms