RNA–Protein interactions for RNA: ENST00000298912.8

CLMN-201, Transcript of calmin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLMN, Length 12,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-201ENST00000298912 NISCHQ9Y2I1 1504 aa10.6□□□□□ -0.71
CLMN-201ENST00000298912 DCAF8L2P0C7V8 631 aa10.08□□□□□ -0.8
CLMN-201ENST00000298912 PELP1Q8IZL8 1130 aaKnown RBP9.93□□□□□ -0.82
CLMN-201ENST00000298912 FAM9AQ8IZU1 332 aaPredicted RBP9.6□□□□□ -0.87
CLMN-201ENST00000298912 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
CLMN-201ENST00000298912 APLP2Q06481 763 aa9.55□□□□□ -0.88
CLMN-201ENST00000298912 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
CLMN-201ENST00000298912 SHROOM4Q9ULL8 1493 aa9.39□□□□□ -0.91
CLMN-201ENST00000298912 EHMT2Q96KQ7 1210 aa9.31□□□□□ -0.92
CLMN-201ENST00000298912 ERICH6Q7L0X2 663 aa9.3□□□□□ -0.92
CLMN-201ENST00000298912 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
CLMN-201ENST00000298912 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
CLMN-201ENST00000298912 MYT1Q01538 1121 aa9.26□□□□□ -0.93
CLMN-201ENST00000298912 PCGF6Q9BYE7 350 aa9.21□□□□□ -0.93
CLMN-201ENST00000298912 NEFLP07196 543 aa9.14□□□□□ -0.95
CLMN-201ENST00000298912 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
CLMN-201ENST00000298912 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
CLMN-201ENST00000298912 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
CLMN-201ENST00000298912 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
CLMN-201ENST00000298912 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
CLMN-201ENST00000298912 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.97
CLMN-201ENST00000298912 ATP1B4Q9UN42 357 aaPredicted RBP8.96□□□□□ -0.98
CLMN-201ENST00000298912 UBTFP17480 764 aaKnown RBP8.95□□□□□ -0.98
CLMN-201ENST00000298912 DCAF1Q9Y4B6 1507 aa8.94□□□□□ -0.98
CLMN-201ENST00000298912 PPARGC1BQ86YN6 1023 aaKnown RBP8.9□□□□□ -0.99
CLMN-201ENST00000298912 RANGAP1P46060 587 aaPredicted RBP8.88□□□□□ -0.99
CLMN-201ENST00000298912 HRCP23327 699 aa8.87□□□□□ -0.99
CLMN-201ENST00000298912 MYO15BQ96JP2 1530 aa8.78□□□□□ -1
CLMN-201ENST00000298912 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
CLMN-201ENST00000298912 ZNF316A6NFI3 1004 aaPredicted RBP8.76□□□□□ -1.01
CLMN-201ENST00000298912 MYT1LQ9UL68 1186 aa8.72□□□□□ -1.01
CLMN-201ENST00000298912 RTL5Q5HYW3 569 aaPredicted RBP8.71□□□□□ -1.02
CLMN-201ENST00000298912 CHIC1Q5VXU3 224 aa8.7□□□□□ -1.02
CLMN-201ENST00000298912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.68□□□□□ -1.02
CLMN-201ENST00000298912 HNRNPUL2Q1KMD3 747 aaKnown RBP8.68□□□□□ -1.02
CLMN-201ENST00000298912 CLSPNQ9HAW4 1339 aa8.63□□□□□ -1.03
CLMN-201ENST00000298912 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
CLMN-201ENST00000298912 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
CLMN-201ENST00000298912 SLC4A1APQ9BWU0 796 aaKnown RBP8.59□□□□□ -1.03
CLMN-201ENST00000298912 BCANQ96GW7 911 aa8.58□□□□□ -1.04
CLMN-201ENST00000298912 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
CLMN-201ENST00000298912 ITGAEP38570 1179 aa8.56□□□□□ -1.04
CLMN-201ENST00000298912 NACADO15069 1562 aa8.51□□□□□ -1.05
CLMN-201ENST00000298912 NEFMP07197 916 aa8.5□□□□□ -1.05
CLMN-201ENST00000298912 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
CLMN-201ENST00000298912 EEA1Q15075 1411 aa8.49□□□□□ -1.05
CLMN-201ENST00000298912 LOC105371045A0A1W2PR82 267 aa8.46□□□□□ -1.05
CLMN-201ENST00000298912 FAM50AQ14320 339 aaKnown RBP8.46□□□□□ -1.06
CLMN-201ENST00000298912 ANP32CO43423 234 aa8.45□□□□□ -1.06
CLMN-201ENST00000298912 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
CLMN-201ENST00000298912 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
CLMN-201ENST00000298912 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
CLMN-201ENST00000298912 ABCC9O60706 1549 aa8.43□□□□□ -1.06
CLMN-201ENST00000298912 CNGB1Q14028 1251 aaPredicted RBP8.43□□□□□ -1.06
CLMN-201ENST00000298912 ANP32BQ92688 251 aaKnown RBP8.43□□□□□ -1.06
CLMN-201ENST00000298912 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
CLMN-201ENST00000298912 RB1CC1Q8TDY2 1594 aa8.42□□□□□ -1.06
CLMN-201ENST00000298912 SCAF1Q9H7N4 1312 aaKnown RBP8.41□□□□□ -1.06
CLMN-201ENST00000298912 SCRIBQ14160 1630 aa8.4□□□□□ -1.07
CLMN-201ENST00000298912 ANP32AP39687 249 aaKnown RBP8.4□□□□□ -1.07
CLMN-201ENST00000298912 EIF5BO60841 1220 aaKnown RBP8.36□□□□□ -1.07
CLMN-201ENST00000298912 BAZ1AQ9NRL2 1556 aaPredicted RBP8.36□□□□□ -1.07
CLMN-201ENST00000298912 RSF1Q96T23 1441 aaPredicted RBP8.35□□□□□ -1.07
CLMN-201ENST00000298912 UPF2Q9HAU5 1272 aaKnown RBP8.34□□□□□ -1.07
CLMN-201ENST00000298912 SLC24A1O60721 1099 aa8.32□□□□□ -1.08
CLMN-201ENST00000298912 GLIPR1L2Q4G1C9 344 aa8.32□□□□□ -1.08
CLMN-201ENST00000298912 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
CLMN-201ENST00000298912 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
CLMN-201ENST00000298912 HSP90AA1P07900 732 aaKnown RBP8.31□□□□□ -1.08
CLMN-201ENST00000298912 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
CLMN-201ENST00000298912 TONSLQ96HA7 1378 aa8.25□□□□□ -1.09
CLMN-201ENST00000298912 FBLN2P98095 1184 aa8.23□□□□□ -1.09
CLMN-201ENST00000298912 NPM2Q86SE8 214 aaKnown RBP8.22□□□□□ -1.09
CLMN-201ENST00000298912 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
CLMN-201ENST00000298912 NBR1Q14596 966 aa8.21□□□□□ -1.09
CLMN-201ENST00000298912 CDK11BP21127 795 aaKnown RBP8.2□□□□□ -1.1
CLMN-201ENST00000298912 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.2□□□□□ -1.1
CLMN-201ENST00000298912 WRNQ14191 1432 aaPredicted RBP eCLIP8.2□□□□□ -1.1
CLMN-201ENST00000298912 CSRNP3Q8WYN3 585 aa8.19□□□□□ -1.1
CLMN-201ENST00000298912 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
CLMN-201ENST00000298912 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
CLMN-201ENST00000298912 STAG3Q9UJ98 1225 aa8.17□□□□□ -1.1
CLMN-201ENST00000298912 GOLGA3Q08378 1498 aa8.17□□□□□ -1.1
CLMN-201ENST00000298912 FKBP8Q14318 412 aa8.16□□□□□ -1.1
CLMN-201ENST00000298912 CEP164Q9UPV0 1460 aa8.16□□□□□ -1.1
CLMN-201ENST00000298912 ANP32EQ9BTT0 268 aa8.15□□□□□ -1.1
CLMN-201ENST00000298912 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLMN-201ENST00000298912 TIMELESSQ9UNS1 1208 aa8.12□□□□□ -1.11
CLMN-201ENST00000298912 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLMN-201ENST00000298912 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
CLMN-201ENST00000298912 ARXQ96QS3 562 aa8.11□□□□□ -1.11
CLMN-201ENST00000298912 RTN4Q9NQC3 1192 aaKnown RBP8.11□□□□□ -1.11
CLMN-201ENST00000298912 WDR43Q15061 677 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLMN-201ENST00000298912 BECN1Q14457 450 aa8.1□□□□□ -1.11
CLMN-201ENST00000298912 TOP2AP11388 1531 aaKnown RBP8.1□□□□□ -1.11
CLMN-201ENST00000298912 CASC1Q6TDU7 716 aa8.09□□□□□ -1.11
CLMN-201ENST00000298912 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
CLMN-201ENST00000298912 BAZ1BQ9UIG0 1483 aaKnown RBP8.08□□□□□ -1.12
CLMN-201ENST00000298912 GOLGA6L22H0YM25 854 aa8.08□□□□□ -1.12
CLMN-201ENST00000298912 SMARCA2P51531 1590 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms