RNA–Protein interactions for RNA: ENST00000224784.10

ACTA2-201, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTA2, Length 1,349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-201ENST00000224784 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
ACTA2-201ENST00000224784 ABCC9O60706 1549 aa22.56■■□□□ 1.2
ACTA2-201ENST00000224784 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
ACTA2-201ENST00000224784 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
ACTA2-201ENST00000224784 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
ACTA2-201ENST00000224784 NACADO15069 1562 aa21.13■□□□□ 0.97
ACTA2-201ENST00000224784 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
ACTA2-201ENST00000224784 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
ACTA2-201ENST00000224784 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
ACTA2-201ENST00000224784 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
ACTA2-201ENST00000224784 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
ACTA2-201ENST00000224784 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
ACTA2-201ENST00000224784 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
ACTA2-201ENST00000224784 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
ACTA2-201ENST00000224784 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
ACTA2-201ENST00000224784 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
ACTA2-201ENST00000224784 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
ACTA2-201ENST00000224784 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
ACTA2-201ENST00000224784 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
ACTA2-201ENST00000224784 CUX2O14529 1486 aa19.76■□□□□ 0.75
ACTA2-201ENST00000224784 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
ACTA2-201ENST00000224784 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
ACTA2-201ENST00000224784 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
ACTA2-201ENST00000224784 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
ACTA2-201ENST00000224784 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
ACTA2-201ENST00000224784 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
ACTA2-201ENST00000224784 NESP48681 1621 aa19.25■□□□□ 0.67
ACTA2-201ENST00000224784 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
ACTA2-201ENST00000224784 SMARCA4P51532 1647 aa19.21■□□□□ 0.67
ACTA2-201ENST00000224784 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
ACTA2-201ENST00000224784 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
ACTA2-201ENST00000224784 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
ACTA2-201ENST00000224784 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
ACTA2-201ENST00000224784 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
ACTA2-201ENST00000224784 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
ACTA2-201ENST00000224784 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
ACTA2-201ENST00000224784 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
ACTA2-201ENST00000224784 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
ACTA2-201ENST00000224784 WDR62O43379 1518 aa18.87■□□□□ 0.61
ACTA2-201ENST00000224784 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
ACTA2-201ENST00000224784 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
ACTA2-201ENST00000224784 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
ACTA2-201ENST00000224784 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
ACTA2-201ENST00000224784 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
ACTA2-201ENST00000224784 WIZO95785 1651 aa18.56■□□□□ 0.56
ACTA2-201ENST00000224784 CFTRP13569 1480 aa18.56■□□□□ 0.56
ACTA2-201ENST00000224784 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.56
ACTA2-201ENST00000224784 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.56
ACTA2-201ENST00000224784 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.56
ACTA2-201ENST00000224784 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
ACTA2-201ENST00000224784 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
ACTA2-201ENST00000224784 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
ACTA2-201ENST00000224784 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
ACTA2-201ENST00000224784 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
ACTA2-201ENST00000224784 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
ACTA2-201ENST00000224784 RSF1Q96T23 1441 aaPredicted RBP18.27■□□□□ 0.52
ACTA2-201ENST00000224784 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
ACTA2-201ENST00000224784 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
ACTA2-201ENST00000224784 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
ACTA2-201ENST00000224784 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
ACTA2-201ENST00000224784 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
ACTA2-201ENST00000224784 CHD1O14646 1710 aa18.17■□□□□ 0.5
ACTA2-201ENST00000224784 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
ACTA2-201ENST00000224784 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
ACTA2-201ENST00000224784 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
ACTA2-201ENST00000224784 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
ACTA2-201ENST00000224784 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
ACTA2-201ENST00000224784 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
ACTA2-201ENST00000224784 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
ACTA2-201ENST00000224784 FBLN2P98095 1184 aa17.99■□□□□ 0.47
ACTA2-201ENST00000224784 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
ACTA2-201ENST00000224784 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
ACTA2-201ENST00000224784 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
ACTA2-201ENST00000224784 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
ACTA2-201ENST00000224784 RAD54L2Q9Y4B4 1467 aa17.89■□□□□ 0.45
ACTA2-201ENST00000224784 SOGA1O94964 1423 aa17.89■□□□□ 0.45
ACTA2-201ENST00000224784 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
ACTA2-201ENST00000224784 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
ACTA2-201ENST00000224784 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
ACTA2-201ENST00000224784 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
ACTA2-201ENST00000224784 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
ACTA2-201ENST00000224784 GAPVD1Q14C86 1478 aa17.81■□□□□ 0.44
ACTA2-201ENST00000224784 CUX1P39880 1505 aa17.72■□□□□ 0.43
ACTA2-201ENST00000224784 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
ACTA2-201ENST00000224784 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.42
ACTA2-201ENST00000224784 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
ACTA2-201ENST00000224784 ERCC6L2Q5T890 1561 aa17.6■□□□□ 0.41
ACTA2-201ENST00000224784 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
ACTA2-201ENST00000224784 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
ACTA2-201ENST00000224784 NUP160Q12769 1436 aa17.57■□□□□ 0.4
ACTA2-201ENST00000224784 SHROOM2Q13796 1616 aa17.57■□□□□ 0.4
ACTA2-201ENST00000224784 KIF13AQ9H1H9 1805 aa17.55■□□□□ 0.4
ACTA2-201ENST00000224784 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
ACTA2-201ENST00000224784 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
ACTA2-201ENST00000224784 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
ACTA2-201ENST00000224784 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
ACTA2-201ENST00000224784 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
ACTA2-201ENST00000224784 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
ACTA2-201ENST00000224784 PRG4Q92954 1404 aaPredicted RBP17.39■□□□□ 0.37
ACTA2-201ENST00000224784 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms