RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ALBP02768 609 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 ATP1B2P14415 290 aaPredicted RBP16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 SSTR2P30874 369 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 SOX11P35716 441 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 KIR3DL1P43629 444 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 TNFSF10P50591 281 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 DYNLT1P63172 113 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 SLC5A12Q1EHB4 618 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 TTLL10Q6ZVT0 673 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 HOOK3Q86VS8 718 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 ZNF567Q8N184 647 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 DTWD1Q8N5C7 304 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 DCUN1D1Q96GG9 259 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 GORASP1Q9BQQ3 440 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 PACSIN1Q9BY11 444 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 FAM96AQ9H5X1 160 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 MRM3Q9HC36 420 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 CTTNBP2NLQ9P2B4 639 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 PLCL2Q9UPR0 1127 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 BZW2Q9Y6E2 419 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 ANKHD1Q8IWZ3 2542 aaKnown RBP16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 SPG11Q96JI7 2443 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 IGLV3-16A0A075B6K0 115 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 A0A1B0GTH6 734 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 VSTM2BA6NLU5 285 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 AGTP01019 485 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 PECAM1P16284 738 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 PBX1P40424 430 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 MSLNQ13421 630 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 INAQ16352 499 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 FIGNQ5HY92 759 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 SASS6Q6UVJ0 657 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 TMEM207Q6UWW9 146 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 CDH24Q86UP0 819 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 SYN2Q92777 582 aaPredicted RBP16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 IRAK4Q9NWZ3 460 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 UVRAGQ9P2Y5 699 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 CRLS1Q9UJA2 301 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 SH3BGRL2Q9UJC5 107 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 KLHL20Q9Y2M5 609 aa16.48■□□□□ 0.23
UBE2D4-209ENST00000454428 SERPING1P05155 500 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 MCM3P25205 808 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 ACADLP28330 430 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 SHMT2P34897 504 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 CDKN1CP49918 316 aaPredicted RBP16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 ARG2P78540 354 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 RPA4Q13156 261 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 MPP3Q13368 585 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 OLIG2Q13516 323 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 TAF1AQ15573 450 aaPredicted RBP16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 NFKBIBQ15653 356 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 RBBP7Q16576 425 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 MTFR2Q6P444 385 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 XKRXQ6PP77 449 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 RFX6Q8HWS3 928 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 OR13C4Q8NGS5 318 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 DLG3Q92796 817 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 COPS8Q99627 209 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 MAK16Q9BXY0 300 aaKnown RBP16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 ZNF160Q9HCG1 818 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 SEMA3GQ9NS98 782 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 ABI3Q9P2A4 366 aa16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 MAP1AP78559 2803 aaPredicted RBP16.47■□□□□ 0.23
UBE2D4-209ENST00000454428 TRAV17A0A0B4J275 112 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 CCL22O00626 93 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 DSCR3O14972 297 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 HPP00738 406 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 PRSS56P0CW18 603 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 RALBP11234 206 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 ZFXP17010 805 aaPredicted RBP16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 CAPN3P20807 821 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 NR1I3Q14994 352 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 MCATQ8IVS2 390 aaKnown RBP16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 ADAMTS18Q8TE60 1221 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 TFB1MQ8WVM0 346 aaKnown RBP16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 HAS2Q92819 552 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 RNF25Q96BH1 459 aaPredicted RBP16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 C14orf79Q96F83 325 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 ENAMQ9NRM1 1142 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 OR6C2Q9NZP2 312 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 SEC14L3Q9UDX4 400 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 PLAGL1Q9UM63 463 aa16.46■□□□□ 0.23
UBE2D4-209ENST00000454428 C2orf81A6NN90 581 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 MED26O95402 600 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 F10P00742 488 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 HOXB4P17483 251 aaPredicted RBP16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 MAGP20916 626 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 AGAP20933 346 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 OR1D4P47884 311 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 ZNF140P52738 457 aaPredicted RBP16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 ARSFP54793 590 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 MESDQ14696 234 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 MFSD7Q6UXD7 560 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 SNX20Q7Z614 316 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 CLDN19Q8N6F1 224 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 METTL27Q8N6F8 245 aaPredicted RBP16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 AMER2Q8N7J2 671 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 ACBD4Q8NC06 268 aa16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 BRIX1Q8TDN6 353 aaKnown RBP16.45■□□□□ 0.22
UBE2D4-209ENST00000454428 ULK4Q96C45 1275 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms