RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PMS2P54278 862 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 RBP5P82980 135 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CEBPZQ03701 1054 aaKnown RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ARHGAP1Q07960 439 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ASTE1Q2TB18 679 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCDC184Q52MB2 194 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 SPDYAQ5MJ70 313 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 TTC39AQ5SRH9 613 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 IL27RAQ6UWB1 636 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 PET117Q6UWS5 81 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 Q6YL49 198 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 MINDY1Q8N5J2 469 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 MIGA1Q8NAN2 632 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 GPR150Q8NGU9 434 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 FAM162AQ96A26 154 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZC3HAV1LQ96H79 300 aaKnown RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 NAF1Q96HR8 494 aaKnown RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZFYVE19Q96K21 471 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CFAP57Q96MR6 1250 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 LGMNQ99538 433 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 MLST8Q9BVC4 326 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 IKZF4Q9H2S9 585 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HRH4Q9H3N8 390 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CWH43Q9H720 699 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 GRPEL1Q9HAV7 217 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CPNE5Q9HCH3 593 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ABCF3Q9NUQ8 709 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 SETD4Q9NVD3 440 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 PLK2Q9NYY3 685 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HMG20BQ9P0W2 317 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 COPG2Q9UBF2 871 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 GTF3C4Q9UKN8 822 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CDH7Q9ULB5 785 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ST3GAL5Q9UNP4 418 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZFP37Q9Y6Q3 630 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 RTTNQ86VV8 2226 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 JMJD1CQ15652 2540 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 BTBD18B2RXH4 712 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 M0QZ92 97 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 PLK4O00444 970 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZNF202O95125 648 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 PLAUP00749 431 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 FYNP06241 537 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CYP2D6P10635 497 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 SELLP14151 372 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CD58P19256 250 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCNE1P24864 410 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 ATP5DP30049 168 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC16A2P36021 539 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 MATR3P43243 847 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 RARRES1P49788 294 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CLCN4P51793 760 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 GALCP54803 685 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 FOXE3Q13461 319 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 MYBPC2Q14324 1141 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 MVPQ14764 893 aaKnown RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 KARSQ15046 597 aaKnown RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 MIIPQ5JXC2 388 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CST9LP1Q5W188 147 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CRELD2Q6UXH1 353 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCDC25Q86WR0 208 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 METTL23Q86XA0 190 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 LRRC43Q8N309 656 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CMASQ8NFW8 434 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 TSPAN14Q8NG11 270 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 OR4N2Q8NGD1 307 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 PPTC7Q8NI37 304 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 DUSP19Q8WTR2 217 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 FBXL8Q96CD0 374 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 UROC1Q96N76 676 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 OR2A14Q96R47 310 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 NUDCD1Q96RS6 583 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 TMEM47Q9BQJ4 181 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 TUBB6Q9BUF5 446 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 KLHL4Q9C0H6 718 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZBP1Q9H171 429 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 NDST4Q9H3R1 872 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 PLK3Q9H4B4 646 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CXorf56Q9H5V9 222 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 DENND2DQ9H6A0 471 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 C2orf42Q9NWW7 574 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 MCM9Q9NXL9 1143 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CWC15Q9P013 229 aaKnown RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 FOXJ2Q9P0K8 574 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 SH3BP4Q9P0V3 963 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 UBA2Q9UBT2 640 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 ANAPC2Q9UJX6 822 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCPG1Q9ULG6 757 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 CMAHPQ9Y471 501 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 TRPV2Q9Y5S1 764 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 NID2Q14112 1375 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 PDCD11Q14690 1871 aaKnown RBP4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 MYH4Q9Y623 1939 aa4.72□□□□□ -1.65
HMGB1P23-201ENST00000518743 FAM237AA0A1B0GTK4 181 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 BICDL2A1A5D9 508 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TARSL2A2RTX5 802 aaKnown RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TMEM191CA6NGB0 347 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TARM1B6A8C7 271 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 AKR1B15C9JRZ8 316 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms