RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 VPS35Q96QK1 796 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 NUSAP1Q9BXS6 441 aaKnown RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 DYRK4Q9NR20 520 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ZNF221Q9UK13 617 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 AGO1Q9UL18 857 aaKnown RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 SMIM35A0A1B0GVV1 85 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 KERAO60938 352 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TMCC2O75069 709 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TBX18O95935 607 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 CYP11A1P05108 521 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 DNAJB1P25685 340 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 FOXA1P55317 472 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 GTF2H2Q13888 395 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TIGD5Q53EQ6 642 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 GTF2H2CQ6P1K8 395 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 PRR23BQ6ZRT6 265 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 PHACTR4Q8IZ21 702 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ATAD1Q8NBU5 361 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 OR5K1Q8NHB7 308 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 COPS4Q9BT78 406 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 ADARB2Q9NS39 739 aaKnown RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 ARVCFO00192 962 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 GABRB3P28472 473 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 SLC13A2Q13183 592 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 TUBA3CQ13748 450 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 NCF4Q15080 339 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 RETREG3Q86VR2 466 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ADGRG5Q8IZF4 528 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 TMEM199Q8N511 208 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 MRGPRX2Q96LB1 330 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 FOPNLQ96NB1 174 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 GDAP2Q9NXN4 497 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 CNTN5O94779 1100 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 GSTM1P09488 218 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 SMPD1P17405 629 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 MAGEA10P43363 369 aaPredicted RBP10.38□□□□□ -0.75
USB1-212ENST00000566082 MAP2K4P45985 399 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 APOFQ13790 326 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 PCBP1Q15365 356 aaKnown RBP eCLIP10.38□□□□□ -0.75
USB1-212ENST00000566082 C6orf136Q5SQH8 315 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ARMC12Q5T9G4 340 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 TRIQKQ629K1 86 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 TTC23LQ6PF05 361 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 BLOC1S3Q6QNY0 202 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 CLEC14AQ86T13 490 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 IGFN1Q86VF2 1251 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 KRT73Q86Y46 540 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 UBE2J2Q8N2K1 259 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 GPR156Q8NFN8 814 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 IRGQQ8WZA9 623 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.75
USB1-212ENST00000566082 AURKBQ96GD4 344 aaPredicted RBP10.38□□□□□ -0.75
USB1-212ENST00000566082 CITED4Q96RK1 184 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 HEPHQ9BQS7 1158 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 OSBPL2Q9H1P3 480 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 TRPV2Q9Y5S1 764 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 PIRO00625 290 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 DFNA5O60443 496 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ENO2P09104 434 aaPredicted RBP10.38□□□□□ -0.75
USB1-212ENST00000566082 HSD17B1P14061 328 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 GRK4P32298 578 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 CTSKP43235 329 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 KIR3DL1P43629 444 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ATP4BP51164 291 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ZNF280AP59817 542 aaPredicted RBP10.38□□□□□ -0.75
USB1-212ENST00000566082 SPIBQ01892 262 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 NDUFA5Q16718 116 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 DOK6Q6PKX4 331 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 LINGO4Q6UY18 593 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ISCA2Q86U28 154 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 ARMC8Q8IUR7 673 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 DENND1CQ8IV53 801 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 HS3ST5Q8IZT8 346 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 C2orf69Q8N8R5 385 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 TRIM63Q969Q1 353 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 GSTO2Q9H4Y5 243 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 RPRD1BQ9NQG5 326 aaKnown RBP10.38□□□□□ -0.75
USB1-212ENST00000566082 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 SNX6Q9UNH7 406 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 KLHL20Q9Y2M5 609 aa10.38□□□□□ -0.75
USB1-212ENST00000566082 SAGE2PA6NJ88 616 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 IQCF5A8MTL0 148 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 H0YAE9 185 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 INMTO95050 263 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 SLC25A14O95258 325 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 POU2F1P14859 743 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 TYMPP19971 482 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 VARSP26640 1264 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 PBLDP30039 288 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 CD52P31358 61 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 PBX3P40426 434 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 LEPRP48357 1165 aaKnown RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
USB1-212ENST00000566082 NUDT6P53370 316 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 PLA2G16P53816 162 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 PTGR1Q14914 329 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 PHKG1Q16816 387 aa10.37□□□□□ -0.75
USB1-212ENST00000566082 PAGE3Q5JUK9 113 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms