RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 SKA3Q8IX90 412 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 KBTBD2Q8IY47 623 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF619Q8N2I2 560 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 MPP5Q8N3R9 675 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 FBXW8Q8N3Y1 598 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 TRAM1L1Q8N609 369 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 IL17RCQ8NAC3 791 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 OR13F1Q8NGS4 319 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 OR10T2Q8NGX3 314 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 WDR48Q8TAF3 677 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ATG4AQ8WYN0 398 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 DDX1Q92499 740 aaKnown RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 GTF2H4Q92759 462 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 RAB24Q969Q5 203 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 KIAA1191Q96A73 305 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 REPS1Q96D71 796 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 WDR89Q96FK6 387 aaPredicted RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 WFIKKN1Q96NZ8 548 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 NECAB3Q96P71 396 aaPredicted RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PANX3Q96QZ0 392 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 NODALQ96S42 347 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 RBM15Q96T37 977 aaKnown RBP eCLIP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 CHP1Q99653 195 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 MIPEPQ99797 713 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 CLSTN3Q9BQT9 956 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 SGPP1Q9BX95 441 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 BBS2Q9BXC9 721 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 NT5C1AQ9BXI3 368 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ASPSCR1Q9BZE9 553 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 IKZF4Q9H2S9 585 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 FOXP1Q9H334 677 aaPredicted RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 CATSPERBQ9H7T0 1116 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PCDH9Q9HC56 1237 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 AKIP1Q9NQ31 210 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 KRT84Q9NSB2 600 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ABCC13Q9NSE7 274 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 CATSPERZQ9NTU4 200 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ZDHHC18Q9NUE0 388 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 TRMT13Q9NUP7 481 aaKnown RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 LYARQ9NX58 379 aaKnown RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 TMOD3Q9NYL9 352 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 TREM2Q9NZC2 230 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 CPNE7Q9UBL6 633 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 HEY2Q9UBP5 337 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ARMCX3Q9UH62 379 aaPredicted RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 MLXQ9UH92 298 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 SERPINB13Q9UIV8 391 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 FBXO5Q9UKT4 447 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 AGO1Q9UL18 857 aaKnown RBP3.56□□□□□ -1.84
XRCC4-203ENST00000396027 ING4Q9UNL4 249 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 SLC9A8Q9Y2E8 581 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 INPP5FQ9Y2H2 1132 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PCDHB7Q9Y5E2 793 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PCDHGB2Q9Y5G2 931 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PCDHGB1Q9Y5G3 927 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PCDHGA8Q9Y5G5 932 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 HSPE1-MOB4S4R3N1 261 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 UNC13BO14795 1591 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 GLI2P10070 1586 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 PSME4Q14997 1843 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 EMSYQ7Z589 1322 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 MYH1P12882 1939 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 MYH6P13533 1939 aa3.56□□□□□ -1.84
XRCC4-203ENST00000396027 RAB19A4D1S5 217 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CBY3A6NI87 242 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 OR6C70A6NIJ9 312 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ERVV-1B6SEH8 477 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 H0Y8G0 127 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 H7C4K7 107 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 hCG_1984214I3L0E3 225 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 KCNK3O14649 394 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TRIM24O15164 1050 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 OGTO15294 1046 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TEX33O43247 280 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 THAP12O43422 761 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 HCRTR2O43614 444 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TSPAN6O43657 245 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 NUDT21O43809 227 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SEC14L2O76054 403 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SUPT7LO94864 414 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TMEM63AO94886 807 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SEC24AO95486 1093 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CBX6O95503 412 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SERPINB2P05120 415 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PROS1P07225 676 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 STSP08842 583 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SPARCP09486 303 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SLC2A4P14672 509 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 HNRNPLP14866 589 aaKnown RBP eCLIP3.55□□□□□ -1.847e-7■■□□□ 12.7
XRCC4-203ENST00000396027 CD36P16671 472 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF30P17039 623 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 IFNAR1P17181 557 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MMP8P22894 467 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 DNASE1P24855 282 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ARNTP27540 789 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MAPK1P28482 360 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MAPK4P31152 587 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CRHR1P34998 444 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CA5AP35218 305 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MAGEA4P43358 317 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms