RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CRKLP46109 303 aaKnown RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 CLDN20P56880 219 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 PPATQ06203 517 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 SRSF1Q07955 248 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 TRAF1Q13077 416 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 HNF4GQ14541 408 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 RRS1Q15050 365 aaKnown RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 KRTCAP3Q53RY4 240 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 KCNT1Q5JUK3 1230 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 SHEQ5VZ18 495 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 FAM109BQ6ICB4 259 aaPredicted RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 BRAT1Q6PJG6 821 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 ATG9AQ7Z3C6 839 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 NDUFAF2Q8N183 169 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 SLC5A8Q8N695 610 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 PRSS3P2Q8NHM4 247 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 C9orf43Q8TAL5 461 aaPredicted RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 HMGCLL1Q8TB92 370 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 UTP15Q8TED0 518 aaKnown RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 WFIKKN2Q8TEU8 576 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 KRT35Q92764 455 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 CCDC47Q96A33 483 aaKnown RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 SPDL1Q96EA4 605 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 HES6Q96HZ4 224 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 CABS1Q96KC9 395 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 PRMT6Q96LA8 375 aaPredicted RBP4.98□□□□□ -1.61
LINC00397-202ENST00000606785 MUS81Q96NY9 551 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 C16orf70Q9BSU1 422 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 INPP5KQ9BT40 448 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 KATNB1Q9BVA0 655 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 TBC1D17Q9HA65 648 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 ABCB8Q9NUT2 735 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 DPP3Q9NY33 737 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 STK26Q9P289 416 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 PADI3Q9ULW8 664 aa4.98□□□□□ -1.61
LINC00397-202ENST00000606785 IGHV4-28A0A0C4DH34 117 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 FEZF1A0PJY2 475 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 LRRD1A4D1F6 860 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 DDX39AO00148 427 aaKnown RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 PLK4O00444 970 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 CLDN4O14493 209 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 ASAP2O43150 1006 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 XRCC3O43542 346 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 VIMP08670 466 aaKnown RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 RAB40ALP0C0E4 278 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 CYP11B2P19099 503 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 CTSCP53634 463 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 TRIP6Q15654 476 aaKnown RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 AMZ1Q400G9 498 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 Q4G0T1 1027 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 DNTTIP2Q5QJE6 756 aaKnown RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 OTUD1Q5VV17 481 aaPredicted RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 ALKBH5Q6P6C2 394 aaKnown RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 GBP6Q6ZN66 633 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 Q6ZTK2 550 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 TLK2Q86UE8 772 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 GPR180Q86V85 440 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 CHERPQ8IWX8 916 aaKnown RBP4.97□□□□□ -1.61
LINC00397-202ENST00000606785 KLHL7Q8IXQ5 586 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 NHLRC2Q8NBF2 726 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 OR2AJ1Q8NGZ0 328 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 OCC1Q8TAD7 63 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 THAP6Q8TBB0 222 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 RIOX1Q9H6W3 641 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 ERAP1Q9NZ08 941 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 CACNG4Q9UBN1 327 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 LOXL2Q9Y4K0 774 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 NME7Q9Y5B8 376 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 NFS1Q9Y697 457 aa4.97□□□□□ -1.61
LINC00397-202ENST00000606785 A0A1W2PPQ1 181 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 GTPBP10A4D1E9 387 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 BECN2A8MW95 431 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 FAM86B1E9PN63 330 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 SOCS6O14544 535 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 SLC30A4O14863 429 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 KINO60870 393 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 SLC22A3O75751 556 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 LCATP04180 440 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 SNRNP70P08621 437 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 FAM86B2P0C5J1 330 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 OR2T7P0C7T2 308 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 HLA-DPA1P20036 260 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 RFX5P48382 616 aaPredicted RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 CLK1P49759 484 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 MXI1P50539 228 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ASCL1P50553 236 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 CLCNKAP51800 687 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 NUDT6P53370 316 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ITGA7Q13683 1181 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 PTGR1Q14914 329 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 PKN2Q16513 984 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 FSCBQ5H9T9 825 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 PAPPA-AS1Q5QFB9 102 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 TYW3Q6IPR3 259 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 TATDN1Q6P1N9 297 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 C15orf39Q6ZRI6 1047 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 MEPCEQ7L2J0 689 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 RD3Q7Z3Z2 195 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms