RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR35, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR35	snR35	NAR1	P23503	491 aa	Known RBP	4.28	□□□□□ -1.72
snR35	snR35	SYP1	P25623	870 aa	Known RBP	4.28	□□□□□ -1.72
snR35	snR35	SCT1	P32784	759 aa		4.28	□□□□□ -1.72
snR35	snR35	PPG1	P32838	368 aa		4.28	□□□□□ -1.72
snR35	snR35	ATG14	P38270	344 aa		4.28	□□□□□ -1.72
snR35	snR35	PAN5	P38787	379 aa		4.28	□□□□□ -1.72
snR35	snR35	FPR3	P38911	411 aa	Known RBP	4.28	□□□□□ -1.72
snR35	snR35	POL5	P39985	1022 aa	Known RBP	4.28	□□□□□ -1.72
snR35	snR35	CHZ1	P40019	153 aa	Predicted RBP	4.28	□□□□□ -1.72
snR35	snR35	IRR1	P40541	1150 aa		4.28	□□□□□ -1.72
snR35	snR35	TIM54	P47045	478 aa		4.28	□□□□□ -1.72
snR35	snR35	JJJ3	P47138	172 aa		4.28	□□□□□ -1.72
snR35	snR35	FAR11	P53917	953 aa		4.28	□□□□□ -1.72
snR35	snR35	SPO75	Q07798	868 aa		4.28	□□□□□ -1.72
snR35	snR35	PPM2	Q08282	695 aa		4.28	□□□□□ -1.72
snR35	snR35	PBY1	P38254	753 aa		4.27	□□□□□ -1.73
snR35	snR35	SLS1	P42900	643 aa		4.27	□□□□□ -1.73
snR35	snR35	CNN1	P43618	361 aa		4.27	□□□□□ -1.73
snR35	snR35	HNT2	P49775	206 aa		4.27	□□□□□ -1.73
snR35	snR35	ALG12	P53730	551 aa		4.27	□□□□□ -1.73
snR35	snR35	TIF35	Q04067	274 aa	Known RBP	4.27	□□□□□ -1.73
snR35	snR35	DPH6	Q12429	685 aa		4.27	□□□□□ -1.73
snR35	snR35	INO1	P11986	533 aa		4.26	□□□□□ -1.73
snR35	snR35	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
snR35	snR35	VBA5	P36172	582 aa		4.26	□□□□□ -1.73
snR35	snR35	SEA4	P38164	1038 aa		4.26	□□□□□ -1.73
snR35	snR35	ALG14	P38242	237 aa		4.26	□□□□□ -1.73
snR35	snR35	YBR184W	P38299	523 aa		4.26	□□□□□ -1.73
snR35	snR35	RGD1	P38339	666 aa		4.26	□□□□□ -1.73
snR35	snR35	REI1	P38344	393 aa	Predicted RBP	4.26	□□□□□ -1.73
snR35	snR35	YHR020W	P38708	688 aa	Known RBP	4.26	□□□□□ -1.73
snR35	snR35	GGA2	P38817	585 aa	Known RBP	4.26	□□□□□ -1.73
snR35	snR35	TED1	P40533	473 aa		4.26	□□□□□ -1.73
snR35	snR35	ERP6	P53198	216 aa		4.26	□□□□□ -1.73
snR35	snR35	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
snR35	snR35	FMP25	Q08023	583 aa		4.26	□□□□□ -1.73
snR35	snR35	LAP2	Q10740	671 aa		4.26	□□□□□ -1.73
snR35	snR35	ELG1	Q12050	791 aa		4.26	□□□□□ -1.73
snR35	snR35	OSH2	Q12451	1283 aa		4.26	□□□□□ -1.73
snR35	snR35	TY4B-P	A0A0B7P3V8	1104 aa		4.25	□□□□□ -1.73
snR35	snR35	DED1	P06634	604 aa	Known RBP	4.25	□□□□□ -1.73
snR35	snR35	GAL11	P19659	1081 aa		4.25	□□□□□ -1.73
snR35	snR35	PRP9	P19736	530 aa	Known RBP	4.25	□□□□□ -1.73
snR35	snR35	RPL8B	P29453	256 aa	Known RBP	4.25	□□□□□ -1.73
snR35	snR35	ABD1	P32783	436 aa	Predicted RBP	4.25	□□□□□ -1.73
snR35	snR35	STE5	P32917	917 aa		4.25	□□□□□ -1.73
snR35	snR35	YKL107W	P34251	309 aa		4.25	□□□□□ -1.73
snR35	snR35	PGM2	P37012	569 aa	Known RBP	4.25	□□□□□ -1.73
snR35	snR35	HSE1	P38753	452 aa		4.25	□□□□□ -1.73
snR35	snR35	YAR028W	P39548	234 aa		4.25	□□□□□ -1.73
snR35	snR35	VPS53	P47061	822 aa		4.25	□□□□□ -1.73
snR35	snR35	RAT1	Q02792	1006 aa	Known RBP	4.25	□□□□□ -1.73
snR35	snR35	YLR225C	Q05948	407 aa	Known RBP	4.25	□□□□□ -1.73
snR35	snR35	FLC1	Q08967	793 aa		4.25	□□□□□ -1.73
snR35	snR35	TY4A-H	Q6Q5P6	413 aa		4.25	□□□□□ -1.73
snR35	snR35	NHA1	Q99271	985 aa		4.25	□□□□□ -1.73
snR35	snR35	SBP1	P10080	294 aa	Known RBP	4.24	□□□□□ -1.73
snR35	snR35	HSP60	P19882	572 aa	Known RBP	4.24	□□□□□ -1.73
snR35	snR35	AFG2	P32794	780 aa		4.24	□□□□□ -1.73
snR35	snR35	MAE1	P36013	669 aa	Known RBP	4.24	□□□□□ -1.73
snR35	snR35	NUP82	P40368	713 aa		4.24	□□□□□ -1.73
snR35	snR35	MPH1	P40562	993 aa		4.24	□□□□□ -1.73
snR35	snR35	UTP8	P53276	713 aa	Known RBP	4.24	□□□□□ -1.73
snR35	snR35	DSE4	P53753	1117 aa		4.24	□□□□□ -1.73
snR35	snR35	YMR074C	Q04773	145 aa		4.24	□□□□□ -1.73
snR35	snR35	YDL176W	Q12027	708 aa		4.24	□□□□□ -1.73
snR35	snR35	YLR125W	Q12138	136 aa		4.24	□□□□□ -1.73
snR35	snR35	CIT1	P00890	479 aa		4.23	□□□□□ -1.73
snR35	snR35	PHO8	P11491	566 aa		4.23	□□□□□ -1.73
snR35	snR35	MOT2	P34909	587 aa	Known RBP	4.23	□□□□□ -1.73
snR35	snR35	ALG3	P38179	458 aa		4.23	□□□□□ -1.73
snR35	snR35	RSP5	P39940	809 aa	Known RBP	4.23	□□□□□ -1.73
snR35	snR35	SPO74	P45819	413 aa		4.23	□□□□□ -1.73
snR35	snR35	PFD1	P46988	109 aa		4.23	□□□□□ -1.73
snR35	snR35	YGR125W	P53273	1036 aa		4.23	□□□□□ -1.73
snR35	snR35	UTP14	Q04500	899 aa	Known RBP	4.23	□□□□□ -1.73
snR35	snR35	ESC2	Q06340	456 aa		4.23	□□□□□ -1.73
snR35	snR35	AOS1	Q06624	347 aa		4.23	□□□□□ -1.73
snR35	snR35	AVO1	Q08236	1176 aa		4.23	□□□□□ -1.73
snR35	snR35	YPL260W	Q08977	551 aa		4.23	□□□□□ -1.73
snR35	snR35	YOR223W	Q12015	292 aa		4.23	□□□□□ -1.73
snR35	snR35	GNT1	Q12096	491 aa		4.23	□□□□□ -1.73
snR35	snR35	PTC5	Q12511	572 aa		4.23	□□□□□ -1.73
snR35	snR35	MET6	P05694	767 aa	Known RBP	4.22	□□□□□ -1.73
snR35	snR35	ERS1	P17261	260 aa		4.22	□□□□□ -1.73
snR35	snR35	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
snR35	snR35	MCM7	P38132	845 aa		4.22	□□□□□ -1.73
snR35	snR35	YGL176C	P46945	554 aa		4.22	□□□□□ -1.73
snR35	snR35	POB3	Q04636	552 aa	Known RBP	4.22	□□□□□ -1.73
snR35	snR35	ARE1	P25628	610 aa		4.21	□□□□□ -1.74
snR35	snR35	GAR1	P28007	205 aa	Known RBP	4.21	□□□□□ -1.74
snR35	snR35	TIM23	P32897	222 aa		4.21	□□□□□ -1.74
snR35	snR35	HUL4	P40985	892 aa		4.21	□□□□□ -1.74
snR35	snR35	YGR045C	P53229	120 aa		4.21	□□□□□ -1.74
snR35	snR35	TPO2	P53283	614 aa		4.21	□□□□□ -1.74
snR35	snR35	YNR063W	P53749	607 aa		4.21	□□□□□ -1.74
snR35	snR35	HPF1	Q05164	967 aa		4.21	□□□□□ -1.74
snR35	snR35	EAF1	Q06337	982 aa		4.21	□□□□□ -1.74
snR35	snR35	YPL066W	Q12194	479 aa		4.21	□□□□□ -1.74
snR35	snR35	CAN1	P04817	590 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 576.9 ms