RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W TYE7P33122 291 aaPredicted RBP2.44□□□□□ -2.02
SEC16YPL085W OLA1P38219 394 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W PRM9P39551 298 aa2.44□□□□□ -2.02
SEC16YPL085W PSY2P40164 858 aa2.44□□□□□ -2.02
SEC16YPL085W MMF1P40185 145 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W MGA2P40578 1113 aa2.44□□□□□ -2.02
SEC16YPL085W PCL10P53124 433 aa2.44□□□□□ -2.02
SEC16YPL085W HOP2P53187 214 aa2.44□□□□□ -2.02
SEC16YPL085W DAS2Q12084 232 aa2.44□□□□□ -2.02
SEC16YPL085W CST26P38226 397 aa2.44□□□□□ -2.02
SEC16YPL085W AIM21P40563 679 aa2.44□□□□□ -2.02
SEC16YPL085W LSB6P42951 607 aa2.44□□□□□ -2.02
SEC16YPL085W CUE3P53137 624 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W GAS5Q08193 484 aa2.44□□□□□ -2.02
SEC16YPL085W VMA1P17255 1071 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W REB1P21538 810 aa2.44□□□□□ -2.02
SEC16YPL085W MSM1P22438 575 aa2.44□□□□□ -2.02
SEC16YPL085W ICP55P40051 511 aa2.44□□□□□ -2.02
SEC16YPL085W IES5P40060 125 aa2.44□□□□□ -2.02
SEC16YPL085W YFR006WP43590 535 aa2.44□□□□□ -2.02
SEC16YPL085W RPM2Q02773 1202 aa2.44□□□□□ -2.02
SEC16YPL085W SRT1Q03175 343 aa2.44□□□□□ -2.02
SEC16YPL085W MTF2P10849 440 aa2.44□□□□□ -2.02
SEC16YPL085W SNT1P25357 1226 aa2.44□□□□□ -2.02
SEC16YPL085W VPS21P36017 210 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W TDA3P38758 523 aa2.44□□□□□ -2.02
SEC16YPL085W MEP1P40260 492 aa2.44□□□□□ -2.02
SEC16YPL085W FYV10P40492 516 aa2.44□□□□□ -2.02
SEC16YPL085W PEX21P50091 288 aa2.44□□□□□ -2.02
SEC16YPL085W ADE16P54113 591 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W SYH1Q02875 849 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W GRX8Q05926 109 aa2.44□□□□□ -2.02
SEC16YPL085W YIG1Q08956 461 aa2.44□□□□□ -2.02
SEC16YPL085W CDC19P00549 500 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W PHR1P05066 565 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SEC16YPL085W ALG1P16661 449 aa2.44□□□□□ -2.02
SEC16YPL085W DPB3P27344 201 aa2.44□□□□□ -2.02
SEC16YPL085W BEM4P39011 633 aa2.44□□□□□ -2.02
SEC16YPL085W SLN1P39928 1220 aaPredicted RBP2.44□□□□□ -2.02
SEC16YPL085W CCT5P40413 562 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W YGR125WP53273 1036 aa2.44□□□□□ -2.02
SEC16YPL085W MFM1Q02783 413 aa2.44□□□□□ -2.02
SEC16YPL085W MTG1Q03151 367 aaPredicted RBP2.44□□□□□ -2.02
SEC16YPL085W EIS1Q05050 843 aaKnown RBP2.44□□□□□ -2.02
SEC16YPL085W YLR297WQ05899 129 aa2.44□□□□□ -2.02
SEC16YPL085W HOS1Q12214 470 aa2.44□□□□□ -2.02
SEC16YPL085W MRE11P32829 692 aa2.43□□□□□ -2.02
SEC16YPL085W RRM3P38766 723 aa2.43□□□□□ -2.02
SEC16YPL085W DOT5P40553 215 aa2.43□□□□□ -2.02
SEC16YPL085W ALD6P54115 500 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W SPO19Q03029 223 aa2.43□□□□□ -2.02
SEC16YPL085W RRI2Q12348 645 aa2.43□□□□□ -2.02
SEC16YPL085W JIP3O13555 125 aa2.43□□□□□ -2.02
SEC16YPL085W RGP1P16664 663 aa2.43□□□□□ -2.02
SEC16YPL085W ACP1P32463 125 aa2.43□□□□□ -2.02
SEC16YPL085W SAH1P39954 449 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W ATG32P40458 529 aa2.43□□□□□ -2.02
SEC16YPL085W FYV8P46949 817 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W MRX6P48564 524 aa2.43□□□□□ -2.02
SEC16YPL085W RSC1P53236 928 aa2.43□□□□□ -2.02
SEC16YPL085W SPO1P53541 631 aa2.43□□□□□ -2.02
SEC16YPL085W GGA1Q06336 557 aa2.43□□□□□ -2.02
SEC16YPL085W RPS24AP0CX31 135 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W RPS24BP0CX32 135 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W NAT1P12945 854 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W RIM1P32445 135 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W RPN12P32496 274 aa2.43□□□□□ -2.02
SEC16YPL085W PPX1P38698 397 aa2.43□□□□□ -2.02
SEC16YPL085W MET18P40469 1032 aa2.43□□□□□ -2.02
SEC16YPL085W NUP84P52891 726 aa2.43□□□□□ -2.02
SEC16YPL085W LSC1P53598 329 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W SMC5Q08204 1093 aa2.43□□□□□ -2.02
SEC16YPL085W RRG1Q12167 365 aaPredicted RBP2.43□□□□□ -2.02
SEC16YPL085W RPC53P25441 422 aa2.43□□□□□ -2.02
SEC16YPL085W UBP13P38187 747 aa2.43□□□□□ -2.02
SEC16YPL085W NET1P47035 1189 aa2.43□□□□□ -2.02
SEC16YPL085W CKI1P20485 582 aa2.43□□□□□ -2.02
SEC16YPL085W CSE1P33307 960 aa2.43□□□□□ -2.02
SEC16YPL085W GPT2P36148 743 aa2.43□□□□□ -2.02
SEC16YPL085W RFC1P38630 861 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W KSP1P38691 1029 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W MSC7P38694 644 aa2.43□□□□□ -2.02
SEC16YPL085W ARC1P46672 376 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W SUB1P54000 292 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W TGL2P54857 326 aa2.43□□□□□ -2.02
SEC16YPL085W HPC2Q01448 625 aa2.43□□□□□ -2.02
SEC16YPL085W UTP5Q04177 643 aaKnown RBP2.43□□□□□ -2.02
SEC16YPL085W CBP2P03874 630 aaPredicted RBP2.42□□□□□ -2.02
SEC16YPL085W SMI1P32566 505 aa2.42□□□□□ -2.02
SEC16YPL085W YME1P32795 747 aa2.42□□□□□ -2.02
SEC16YPL085W MIC60P36112 540 aa2.42□□□□□ -2.02
SEC16YPL085W GUA1P38625 525 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W VPS45P38932 577 aa2.42□□□□□ -2.02
SEC16YPL085W YFH7P43591 353 aa2.42□□□□□ -2.02
SEC16YPL085W MTR3P48240 250 aaPredicted RBP2.42□□□□□ -2.02
SEC16YPL085W JIP5Q06214 492 aaPredicted RBP2.42□□□□□ -2.02
SEC16YPL085W SSA1P10591 642 aaKnown RBP2.42□□□□□ -2.02
SEC16YPL085W SDH2P21801 266 aa2.42□□□□□ -2.02
SEC16YPL085W PPH3P32345 308 aa2.42□□□□□ -2.02
SEC16YPL085W YER156CP40093 338 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms