RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W RAD55P38953 406 aa5.55□□□□□ -1.52
RET3YPL010W SUT1P53032 299 aaKnown RBP5.55□□□□□ -1.52
RET3YPL010W NUP192P47054 1683 aa5.54□□□□□ -1.52
RET3YPL010W COBP00163 385 aa5.54□□□□□ -1.52
RET3YPL010W KAE1P36132 386 aa5.54□□□□□ -1.52
RET3YPL010W SAF1P38352 637 aa5.54□□□□□ -1.52
RET3YPL010W BOL3P39724 118 aa5.54□□□□□ -1.52
RET3YPL010W POL5P39985 1022 aaKnown RBP5.54□□□□□ -1.52
RET3YPL010W PSY2P40164 858 aa5.54□□□□□ -1.52
RET3YPL010W CTH1P47976 325 aa5.54□□□□□ -1.52
RET3YPL010W ALO1P54783 526 aaKnown RBP5.54□□□□□ -1.52
RET3YPL010W YLR122CQ12312 125 aa5.54□□□□□ -1.52
RET3YPL010W TIF6Q12522 245 aaKnown RBP5.54□□□□□ -1.52
RET3YPL010W ADE6P38972 1358 aaKnown RBP5.54□□□□□ -1.52
RET3YPL010W LEU2P04173 364 aaPredicted RBP5.53□□□□□ -1.52
RET3YPL010W RPB10P22139 70 aa5.53□□□□□ -1.52
RET3YPL010W OMA1P36163 345 aa5.53□□□□□ -1.52
RET3YPL010W SPO71Q03868 1245 aa5.53□□□□□ -1.52
RET3YPL010W REC8Q12188 680 aa5.53□□□□□ -1.52
RET3YPL010W RRP5Q05022 1729 aaKnown RBP5.52□□□□□ -1.53
RET3YPL010W MTR4P47047 1073 aaKnown RBP5.52□□□□□ -1.53
RET3YPL010W MED7Q08278 222 aa5.52□□□□□ -1.53
RET3YPL010W SCT1P32784 759 aa5.51□□□□□ -1.53
RET3YPL010W MAE1P36013 669 aaKnown RBP5.51□□□□□ -1.53
RET3YPL010W XKS1P42826 600 aa5.51□□□□□ -1.53
RET3YPL010W PRP43P53131 767 aaKnown RBP5.51□□□□□ -1.53
RET3YPL010W YNR065CP53751 1116 aa5.51□□□□□ -1.53
RET3YPL010W GLO4Q12320 285 aa5.51□□□□□ -1.53
RET3YPL010W SPE2P21182 396 aa5.5□□□□□ -1.53
RET3YPL010W YKR075CP36155 307 aa5.5□□□□□ -1.53
RET3YPL010W NCE103P53615 221 aa5.5□□□□□ -1.53
RET3YPL010W RSC4Q02206 625 aa5.5□□□□□ -1.53
RET3YPL010W MEC3Q02574 474 aa5.5□□□□□ -1.53
RET3YPL010W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
RET3YPL010W YRF1-2P40105 1681 aa5.5□□□□□ -1.53
RET3YPL010W TRP3P00937 484 aa5.49□□□□□ -1.53
RET3YPL010W CHS2P14180 963 aa5.49□□□□□ -1.53
RET3YPL010W YKR073CP36153 106 aa5.49□□□□□ -1.53
RET3YPL010W SAP155P43612 1002 aa5.49□□□□□ -1.53
RET3YPL010W YJR124CP47159 448 aa5.49□□□□□ -1.53
RET3YPL010W ELG1Q12050 791 aa5.49□□□□□ -1.53
RET3YPL010W RPS24AP0CX31 135 aaKnown RBP5.48□□□□□ -1.53
RET3YPL010W RPS24BP0CX32 135 aaKnown RBP5.48□□□□□ -1.53
RET3YPL010W PYC2P32327 1180 aaKnown RBP5.48□□□□□ -1.53
RET3YPL010W CHZ1P40019 153 aaPredicted RBP5.48□□□□□ -1.53
RET3YPL010W UFD2P54860 961 aa5.48□□□□□ -1.53
RET3YPL010W HAS1Q03532 505 aaKnown RBP5.48□□□□□ -1.53
RET3YPL010W PUB1P32588 453 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
RET3YPL010W SPO74P45819 413 aa5.47□□□□□ -1.53
RET3YPL010W ACF4P47129 309 aa5.47□□□□□ -1.53
RET3YPL010W ATG1P53104 897 aa5.47□□□□□ -1.53
RET3YPL010W YRF1-4O13559 1382 aa5.46□□□□□ -1.54
RET3YPL010W MSB1P21339 1137 aaKnown RBP5.46□□□□□ -1.54
RET3YPL010W NEO1P40527 1151 aa5.46□□□□□ -1.54
RET3YPL010W FET4P40988 552 aa5.46□□□□□ -1.54
RET3YPL010W KIP3P53086 805 aaKnown RBP5.46□□□□□ -1.54
RET3YPL010W FAR11P53917 953 aa5.46□□□□□ -1.54
RET3YPL010W CTR9P89105 1077 aa5.46□□□□□ -1.54
RET3YPL010W NAM7P30771 971 aaKnown RBP5.45□□□□□ -1.54
RET3YPL010W AKR1P39010 764 aa5.45□□□□□ -1.54
RET3YPL010W KAR5Q04746 504 aa5.45□□□□□ -1.54
RET3YPL010W BUG1Q12191 341 aa5.45□□□□□ -1.54
RET3YPL010W TOS1P38288 455 aa5.44□□□□□ -1.54
RET3YPL010W RRT14P40470 206 aa5.44□□□□□ -1.54
RET3YPL010W UTP22P53254 1237 aaPredicted RBP5.44□□□□□ -1.54
RET3YPL010W RPL34AP87262 121 aaPredicted RBP5.44□□□□□ -1.54
RET3YPL010W CTT1P06115 562 aa5.43□□□□□ -1.54
RET3YPL010W ERS1P17261 260 aa5.43□□□□□ -1.54
RET3YPL010W RIM11P38615 370 aa5.43□□□□□ -1.54
RET3YPL010W GLO3P38682 493 aaKnown RBP5.43□□□□□ -1.54
RET3YPL010W QDR1P40475 563 aa5.43□□□□□ -1.54
RET3YPL010W EAF6P47128 113 aa5.43□□□□□ -1.54
RET3YPL010W YGR130CP53278 816 aa5.43□□□□□ -1.54
RET3YPL010W MSH6Q03834 1242 aa5.43□□□□□ -1.54
RET3YPL010W ATG13Q06628 738 aa5.43□□□□□ -1.54
RET3YPL010W IRC24P40580 263 aa5.42□□□□□ -1.54
RET3YPL010W MAG2Q06436 670 aaKnown RBP5.42□□□□□ -1.54
RET3YPL010W GIC2Q06648 383 aa5.42□□□□□ -1.54
RET3YPL010W BRE4Q07660 1125 aa5.42□□□□□ -1.54
RET3YPL010W YLL054CQ12244 843 aa5.42□□□□□ -1.54
RET3YPL010W CYC7P00045 113 aa5.41□□□□□ -1.54
RET3YPL010W TRL1P09880 827 aaKnown RBP5.41□□□□□ -1.54
RET3YPL010W RAD4P14736 754 aa5.41□□□□□ -1.54
RET3YPL010W YKL222CP35995 705 aa5.41□□□□□ -1.54
RET3YPL010W GCV1P48015 400 aa5.41□□□□□ -1.54
RET3YPL010W TRS120Q04183 1289 aa5.41□□□□□ -1.54
RET3YPL010W YIG1Q08956 461 aa5.41□□□□□ -1.54
RET3YPL010W YOR223WQ12015 292 aa5.41□□□□□ -1.54
RET3YPL010W MNL2Q12205 849 aa5.41□□□□□ -1.54
RET3YPL010W URB1P34241 1764 aaKnown RBP5.4□□□□□ -1.54
RET3YPL010W NPR1P22211 790 aa5.4□□□□□ -1.54
RET3YPL010W GRX1P25373 110 aaKnown RBP5.4□□□□□ -1.54
RET3YPL010W SQS1P53866 767 aaKnown RBP5.4□□□□□ -1.54
RET3YPL010W YNL011CP53980 444 aa5.4□□□□□ -1.54
RET3YPL010W CMR1Q12510 522 aaKnown RBP5.4□□□□□ -1.54
RET3YPL010W LIP5P32875 414 aa5.39□□□□□ -1.55
RET3YPL010W ADE16P54113 591 aaKnown RBP5.39□□□□□ -1.55
RET3YPL010W CDC55Q00362 526 aa5.39□□□□□ -1.55
RET3YPL010W HTS1P07263 546 aaKnown RBP5.38□□□□□ -1.55
RET3YPL010W DUR3P33413 735 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms