RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	SLP1	Q12232	587 aa		5.05	□□□□□ -1.6
RPA43	YOR340C	SEC7	P11075	2009 aa	Known RBP	5.05	□□□□□ -1.6
RPA43	YOR340C	TY4B-P	A0A0B7P3V8	1104 aa		5.04	□□□□□ -1.6
RPA43	YOR340C	FET4	P40988	552 aa		5.04	□□□□□ -1.6
RPA43	YOR340C	NUT1	P53114	1132 aa		5.04	□□□□□ -1.6
RPA43	YOR340C	GUP1	P53154	560 aa		5.04	□□□□□ -1.6
RPA43	YOR340C	DAL4	Q04895	635 aa		5.04	□□□□□ -1.6
RPA43	YOR340C	TY4A-H	Q6Q5P6	413 aa		5.04	□□□□□ -1.6
RPA43	YOR340C	KAR2	P16474	682 aa	Known RBP	5.03	□□□□□ -1.6
RPA43	YOR340C	PRP40	P33203	583 aa	Known RBP	5.03	□□□□□ -1.6
RPA43	YOR340C	DUR3	P33413	735 aa		5.03	□□□□□ -1.6
RPA43	YOR340C	RIM11	P38615	370 aa		5.03	□□□□□ -1.6
RPA43	YOR340C	LEM3	P42838	414 aa		5.03	□□□□□ -1.6
RPA43	YOR340C	CMR1	Q12510	522 aa	Known RBP	5.03	□□□□□ -1.6
RPA43	YOR340C	NPR1	P22211	790 aa		5.02	□□□□□ -1.61
RPA43	YOR340C	MCM5	P29496	775 aa	Known RBP	5.02	□□□□□ -1.61
RPA43	YOR340C	RVS167	P39743	482 aa	Known RBP	5.02	□□□□□ -1.61
RPA43	YOR340C	YNR065C	P53751	1116 aa		5.02	□□□□□ -1.61
RPA43	YOR340C	ALO1	P54783	526 aa	Known RBP	5.02	□□□□□ -1.61
RPA43	YOR340C	TRM3	Q07527	1436 aa		5.02	□□□□□ -1.61
RPA43	YOR340C	HVG1	P0CE11	249 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	SAC7	P17121	654 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	OMA1	P36163	345 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	PAN5	P38787	379 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	SAP155	P43612	1002 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	YJR107W	P47145	328 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	ARI1	P53111	347 aa	Known RBP	5.01	□□□□□ -1.61
RPA43	YOR340C	YAF9	P53930	226 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	HAS1	Q03532	505 aa	Known RBP	5.01	□□□□□ -1.61
RPA43	YOR340C	OYE2	Q03558	400 aa	Known RBP	5.01	□□□□□ -1.61
RPA43	YOR340C	SPO71	Q03868	1245 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	YOR093C	Q12275	1648 aa		5.01	□□□□□ -1.61
RPA43	YOR340C	GLT1	Q12680	2145 aa	Known RBP	5	□□□□□ -1.61
RPA43	YOR340C	CAT8	P39113	1433 aa		5	□□□□□ -1.61
RPA43	YOR340C	SFA1	P32771	386 aa		5	□□□□□ -1.61
RPA43	YOR340C	SEC8	P32855	1065 aa		5	□□□□□ -1.61
RPA43	YOR340C	FAA3	P39002	694 aa		5	□□□□□ -1.61
RPA43	YOR340C	IRC24	P40580	263 aa		5	□□□□□ -1.61
RPA43	YOR340C	RSM26	P47141	266 aa		5	□□□□□ -1.61
RPA43	YOR340C	TOS4	Q06266	489 aa		5	□□□□□ -1.61
RPA43	YOR340C	YSP2	Q06681	1438 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	MCM2	P29469	868 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	UGA4	P32837	571 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	SQT1	P35184	431 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	SHU2	P38957	223 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	FYV10	P40492	516 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	YGR122W	P53272	402 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	TY1A-NL1	Q12391	440 aa	Known RBP	4.99	□□□□□ -1.61
RPA43	YOR340C	AIM44	Q99299	758 aa		4.99	□□□□□ -1.61
RPA43	YOR340C	PRP5	P21372	849 aa	Predicted RBP	4.98	□□□□□ -1.61
RPA43	YOR340C	RPS26A	P39938	119 aa	Known RBP	4.98	□□□□□ -1.61
RPA43	YOR340C	RPS26B	P39939	119 aa	Known RBP	4.98	□□□□□ -1.61
RPA43	YOR340C	ULP1	Q02724	621 aa		4.98	□□□□□ -1.61
RPA43	YOR340C	HXK1	P04806	485 aa	Known RBP	4.97	□□□□□ -1.61
RPA43	YOR340C	HTS1	P07263	546 aa	Known RBP	4.97	□□□□□ -1.61
RPA43	YOR340C	DSE4	P53753	1117 aa		4.97	□□□□□ -1.61
RPA43	YOR340C	SPR28	Q04921	423 aa		4.97	□□□□□ -1.61
RPA43	YOR340C	ELG1	Q12050	791 aa		4.97	□□□□□ -1.61
RPA43	YOR340C	DNF3	Q12674	1656 aa		4.96	□□□□□ -1.61
RPA43	YOR340C	PEP7	P32609	515 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	MAE1	P36013	669 aa	Known RBP	4.96	□□□□□ -1.62
RPA43	YOR340C	YKL077W	P36081	392 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	POL5	P39985	1022 aa	Known RBP	4.96	□□□□□ -1.62
RPA43	YOR340C	MRPS18	P42847	217 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	PEX13	P80667	386 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	YPL109C	Q02981	657 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	ADI1	Q03677	179 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	YMR074C	Q04773	145 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	SVF1	Q05515	481 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	YIG1	Q08956	461 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	MCD1	Q12158	566 aa		4.96	□□□□□ -1.62
RPA43	YOR340C	RAD2	P07276	1031 aa		4.95	□□□□□ -1.62
RPA43	YOR340C	CYC8	P14922	966 aa		4.95	□□□□□ -1.62
RPA43	YOR340C	RSC6	P25632	483 aa		4.95	□□□□□ -1.62
RPA43	YOR340C	UTP22	P53254	1237 aa	Predicted RBP	4.95	□□□□□ -1.62
RPA43	YOR340C	FAR11	P53917	953 aa		4.95	□□□□□ -1.62
RPA43	YOR340C	ESF1	Q06344	628 aa	Known RBP	4.95	□□□□□ -1.62
RPA43	YOR340C	ERS1	P17261	260 aa		4.94	□□□□□ -1.62
RPA43	YOR340C	PRE9	P23638	258 aa	Known RBP	4.94	□□□□□ -1.62
RPA43	YOR340C	GCV1	P48015	400 aa		4.94	□□□□□ -1.62
RPA43	YOR340C	JIP5	Q06214	492 aa	Predicted RBP	4.94	□□□□□ -1.62
RPA43	YOR340C	YLL054C	Q12244	843 aa		4.94	□□□□□ -1.62
RPA43	YOR340C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-DR6	P0CX70	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-ER1	P0CX71	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-LR2	P0CX72	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-PL	P0CX73	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-JR1	P0CX74	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-LR3	P0CX75	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-ML2	P0CX76	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	MSH3	P25336	1018 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	PEX28	P38848	579 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	NOG1	Q02892	647 aa	Known RBP	4.93	□□□□□ -1.62
RPA43	YOR340C	RMD1	Q03441	430 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-GR1	Q12085	440 aa		4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.93	□□□□□ -1.62
RPA43	YOR340C	TY1A-OL	Q92392	440 aa	Known RBP	4.93	□□□□□ -1.62
RPA43	YOR340C	BNR1	P40450	1375 aa		4.92	□□□□□ -1.62
RPA43	YOR340C	NAM7	P30771	971 aa	Known RBP	4.92	□□□□□ -1.62
RPA43	YOR340C	YKR073C	P36153	106 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms