RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C IOC3P43596 787 aa4.85□□□□□ -1.63
CIT1YNR001C VPS16Q03308 798 aa4.85□□□□□ -1.63
CIT1YNR001C NSE3Q05541 303 aa4.85□□□□□ -1.63
CIT1YNR001C CMR1Q12510 522 aaKnown RBP4.85□□□□□ -1.63
CIT1YNR001C YGR161W-CQ3E744 92 aa4.85□□□□□ -1.63
CIT1YNR001C RKR1Q04781 1562 aa4.85□□□□□ -1.63
CIT1YNR001C CHS2P14180 963 aa4.84□□□□□ -1.63
CIT1YNR001C NAB3P38996 802 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
CIT1YNR001C FYV10P40492 516 aa4.84□□□□□ -1.63
CIT1YNR001C MCM2P29469 868 aa4.83□□□□□ -1.64
CIT1YNR001C GCD6P32501 712 aaKnown RBP4.83□□□□□ -1.64
CIT1YNR001C NOP2P40991 618 aaKnown RBP4.83□□□□□ -1.64
CIT1YNR001C UFD2P54860 961 aa4.83□□□□□ -1.64
CIT1YNR001C RPN4Q03465 531 aa4.83□□□□□ -1.64
CIT1YNR001C TRS120Q04183 1289 aa4.83□□□□□ -1.64
CIT1YNR001C SPR28Q04921 423 aa4.83□□□□□ -1.64
CIT1YNR001C MET6P05694 767 aaKnown RBP4.82□□□□□ -1.64
CIT1YNR001C NPR1P22211 790 aa4.82□□□□□ -1.64
CIT1YNR001C SPO74P45819 413 aa4.82□□□□□ -1.64
CIT1YNR001C YGL081WP53156 320 aa4.82□□□□□ -1.64
CIT1YNR001C UTP14Q04500 899 aaKnown RBP4.82□□□□□ -1.64
CIT1YNR001C BRE4Q07660 1125 aa4.82□□□□□ -1.64
CIT1YNR001C SSF2Q12153 453 aaPredicted RBP4.82□□□□□ -1.64
CIT1YNR001C NTE1Q04958 1679 aa4.82□□□□□ -1.64
CIT1YNR001C PRP5P21372 849 aaPredicted RBP4.81□□□□□ -1.64
CIT1YNR001C PET112P33893 541 aa4.81□□□□□ -1.64
CIT1YNR001C ESF1Q06344 628 aaKnown RBP4.81□□□□□ -1.64
CIT1YNR001C GPI13Q07830 1017 aa4.81□□□□□ -1.64
CIT1YNR001C OXR1Q08952 273 aa4.81□□□□□ -1.64
CIT1YNR001C CYC7P00045 113 aa4.8□□□□□ -1.64
CIT1YNR001C MNN1P39106 762 aa4.8□□□□□ -1.64
CIT1YNR001C RPS26AP39938 119 aaKnown RBP4.8□□□□□ -1.64
CIT1YNR001C RPS26BP39939 119 aaKnown RBP4.8□□□□□ -1.64
CIT1YNR001C MSH6Q03834 1242 aa4.8□□□□□ -1.64
CIT1YNR001C BUD21Q08492 214 aaPredicted RBP4.8□□□□□ -1.64
CIT1YNR001C HTS1P07263 546 aaKnown RBP4.8□□□□□ -1.64
CIT1YNR001C MNR2P35724 969 aa4.8□□□□□ -1.64
CIT1YNR001C PBP2P38151 413 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
CIT1YNR001C YNL011CP53980 444 aa4.8□□□□□ -1.64
CIT1YNR001C GIC2Q06648 383 aa4.8□□□□□ -1.64
CIT1YNR001C YIG1Q08956 461 aa4.8□□□□□ -1.64
CIT1YNR001C PHO4P07270 312 aaKnown RBP4.79□□□□□ -1.64
CIT1YNR001C GCD1P09032 578 aaPredicted RBP4.79□□□□□ -1.64
CIT1YNR001C TPM2P40414 161 aa4.79□□□□□ -1.64
CIT1YNR001C MSH4P40965 878 aaPredicted RBP4.79□□□□□ -1.64
CIT1YNR001C DAK2P43550 591 aa4.79□□□□□ -1.64
CIT1YNR001C SAP155P43612 1002 aa4.79□□□□□ -1.64
CIT1YNR001C SDH1Q00711 640 aa4.79□□□□□ -1.64
CIT1YNR001C PDR15Q04182 1529 aaKnown RBP4.78□□□□□ -1.64
CIT1YNR001C FLP1P03870 423 aa4.78□□□□□ -1.64
CIT1YNR001C MSB1P21339 1137 aaKnown RBP4.78□□□□□ -1.64
CIT1YNR001C GPT2P36148 743 aa4.78□□□□□ -1.64
CIT1YNR001C GRX7P38068 203 aa4.78□□□□□ -1.64
CIT1YNR001C SAM37P50110 327 aa4.78□□□□□ -1.64
CIT1YNR001C CDC55Q00362 526 aa4.78□□□□□ -1.64
CIT1YNR001C YOR223WQ12015 292 aa4.78□□□□□ -1.64
CIT1YNR001C GRX4P32642 244 aa4.77□□□□□ -1.65
CIT1YNR001C VPS35P34110 944 aa4.77□□□□□ -1.65
CIT1YNR001C BUD6P41697 788 aa4.77□□□□□ -1.65
CIT1YNR001C YMR074CQ04773 145 aa4.77□□□□□ -1.65
CIT1YNR001C BSC2Q05611 235 aa4.77□□□□□ -1.65
CIT1YNR001C BDF2Q07442 638 aa4.77□□□□□ -1.65
CIT1YNR001C YOL057WQ08225 711 aa4.77□□□□□ -1.65
CIT1YNR001C TY1A-LR4P0C2I8 440 aaKnown RBP4.76□□□□□ -1.65
CIT1YNR001C TY1A-DR6P0CX70 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-ER1P0CX71 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-LR2P0CX72 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-PLP0CX73 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-JR1P0CX74 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-LR3P0CX75 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-ML2P0CX76 440 aa4.76□□□□□ -1.65
CIT1YNR001C GRX1P25373 110 aaKnown RBP4.76□□□□□ -1.65
CIT1YNR001C GCV1P48015 400 aa4.76□□□□□ -1.65
CIT1YNR001C NUT1P53114 1132 aa4.76□□□□□ -1.65
CIT1YNR001C YGR122WP53272 402 aa4.76□□□□□ -1.65
CIT1YNR001C DOT1Q04089 582 aaKnown RBP4.76□□□□□ -1.65
CIT1YNR001C TY1A-GR1Q12085 440 aa4.76□□□□□ -1.65
CIT1YNR001C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.76□□□□□ -1.65
CIT1YNR001C TY1A-OLQ92392 440 aaKnown RBP4.76□□□□□ -1.65
CIT1YNR001C WHI3P34761 661 aaKnown RBP4.75□□□□□ -1.65
CIT1YNR001C YHL008CP38750 627 aa4.75□□□□□ -1.65
CIT1YNR001C NUP82P40368 713 aa4.75□□□□□ -1.65
CIT1YNR001C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
CIT1YNR001C YJR142WP47173 342 aa4.75□□□□□ -1.65
CIT1YNR001C HUL5P53119 910 aa4.75□□□□□ -1.65
CIT1YNR001C INP54Q08227 384 aaKnown RBP4.75□□□□□ -1.65
CIT1YNR001C ALG6Q12001 544 aaKnown RBP4.75□□□□□ -1.65
CIT1YNR001C GIN4Q12263 1142 aa4.75□□□□□ -1.65
CIT1YNR001C LRG1P35688 1017 aa4.74□□□□□ -1.65
CIT1YNR001C CIC1P38779 376 aaKnown RBP4.74□□□□□ -1.65
CIT1YNR001C UBP5P39944 805 aa4.74□□□□□ -1.65
CIT1YNR001C TIM54P47045 478 aa4.74□□□□□ -1.65
CIT1YNR001C EAR1Q03212 550 aa4.74□□□□□ -1.65
CIT1YNR001C PHO8P11491 566 aa4.73□□□□□ -1.65
CIT1YNR001C CYC8P14922 966 aa4.73□□□□□ -1.65
CIT1YNR001C ECM2P38241 364 aaKnown RBP4.73□□□□□ -1.65
CIT1YNR001C CHZ1P40019 153 aaPredicted RBP4.73□□□□□ -1.65
CIT1YNR001C UTP22P53254 1237 aaPredicted RBP4.73□□□□□ -1.65
CIT1YNR001C TPO2P53283 614 aa4.73□□□□□ -1.65
CIT1YNR001C MEC3Q02574 474 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms