RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C NIS1P53939 407 aa3.63□□□□□ -1.83
SQS1YNL224C ADE12P80210 433 aaKnown RBP3.63□□□□□ -1.83
SQS1YNL224C RAT1Q02792 1006 aaKnown RBP3.63□□□□□ -1.83
SQS1YNL224C MUB1Q03162 620 aa3.63□□□□□ -1.83
SQS1YNL224C YML083CQ04526 418 aa3.63□□□□□ -1.83
SQS1YNL224C NNT1Q05874 261 aa3.63□□□□□ -1.83
SQS1YNL224C YDL129WQ07555 291 aa3.63□□□□□ -1.83
SQS1YNL224C OSH2Q12451 1283 aa3.63□□□□□ -1.83
SQS1YNL224C ILS1P09436 1072 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C NPP1P25353 742 aa3.62□□□□□ -1.83
SQS1YNL224C TPD3P31383 635 aa3.62□□□□□ -1.83
SQS1YNL224C TPS2P31688 896 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C EFB1P32471 206 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C OLA1P38219 394 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C MAD1P40957 749 aa3.62□□□□□ -1.83
SQS1YNL224C BBC1P47068 1157 aa3.62□□□□□ -1.83
SQS1YNL224C VPS70P47161 811 aa3.62□□□□□ -1.83
SQS1YNL224C HGH1P48362 394 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C NOP15P53927 220 aaPredicted RBP3.62□□□□□ -1.83
SQS1YNL224C TGL2P54857 326 aa3.62□□□□□ -1.83
SQS1YNL224C FDC1Q03034 503 aa3.62□□□□□ -1.83
SQS1YNL224C ERB1Q04660 807 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C PHM7Q12252 991 aa3.62□□□□□ -1.83
SQS1YNL224C YMR084WA2P2R3 262 aa3.62□□□□□ -1.83
SQS1YNL224C RPB2P08518 1224 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C TRM1P15565 570 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C SEC2P17065 759 aa3.62□□□□□ -1.83
SQS1YNL224C SRO9P25567 434 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C SRP40P32583 406 aaPredicted RBP3.62□□□□□ -1.83
SQS1YNL224C PTH2P34222 208 aa3.62□□□□□ -1.83
SQS1YNL224C MIF2P35201 549 aa3.62□□□□□ -1.83
SQS1YNL224C SWH1P35845 1188 aa3.62□□□□□ -1.83
SQS1YNL224C VAC8P39968 578 aa3.62□□□□□ -1.83
SQS1YNL224C YJL070CP40361 888 aa3.62□□□□□ -1.83
SQS1YNL224C RTF1P53064 558 aa3.62□□□□□ -1.83
SQS1YNL224C DCP2P53550 970 aaKnown RBP3.62□□□□□ -1.83
SQS1YNL224C SRC1Q03707 834 aa3.62□□□□□ -1.83
SQS1YNL224C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SQS1YNL224C YKU80Q04437 629 aa3.62□□□□□ -1.83
SQS1YNL224C MPD2Q99316 277 aa3.62□□□□□ -1.83
SQS1YNL224C SEN2P16658 377 aa3.61□□□□□ -1.83
SQS1YNL224C PDI1P17967 522 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C REC107P21651 314 aa3.61□□□□□ -1.83
SQS1YNL224C CLB1P24868 471 aa3.61□□□□□ -1.83
SQS1YNL224C YKL091CP33324 310 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C BMH2P34730 273 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C BOI1P38041 980 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C PBP2P38151 413 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SQS1YNL224C TAT2P38967 592 aa3.61□□□□□ -1.83
SQS1YNL224C ESL1P40456 1118 aa3.61□□□□□ -1.83
SQS1YNL224C YIR014WP40570 242 aa3.61□□□□□ -1.83
SQS1YNL224C SET4P42948 560 aa3.61□□□□□ -1.83
SQS1YNL224C ROG3P43602 733 aa3.61□□□□□ -1.83
SQS1YNL224C ATP22P50273 684 aaPredicted RBP3.61□□□□□ -1.83
SQS1YNL224C UBP2Q01476 1272 aa3.61□□□□□ -1.83
SQS1YNL224C GCR2Q01722 534 aa3.61□□□□□ -1.83
SQS1YNL224C ADA2Q02336 434 aa3.61□□□□□ -1.83
SQS1YNL224C VPS60Q03390 229 aa3.61□□□□□ -1.83
SQS1YNL224C VMS1Q04311 632 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C RRN11Q04712 507 aa3.61□□□□□ -1.83
SQS1YNL224C YOL036WQ08206 761 aa3.61□□□□□ -1.83
SQS1YNL224C RIO1Q12196 484 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C FUS1P11710 512 aa3.61□□□□□ -1.83
SQS1YNL224C DIT2P21595 489 aa3.61□□□□□ -1.83
SQS1YNL224C PPQ1P32945 549 aa3.61□□□□□ -1.83
SQS1YNL224C DOM34P33309 386 aa3.61□□□□□ -1.83
SQS1YNL224C YHR219WP38900 624 aa3.61□□□□□ -1.83
SQS1YNL224C MDE1P47095 244 aa3.61□□□□□ -1.83
SQS1YNL224C YGR067CP53243 804 aa3.61□□□□□ -1.83
SQS1YNL224C IST1P53843 298 aaPredicted RBP3.61□□□□□ -1.83
SQS1YNL224C ARO80Q04052 950 aa3.61□□□□□ -1.83
SQS1YNL224C SPO20Q04359 397 aa3.61□□□□□ -1.83
SQS1YNL224C YLR271WQ06152 274 aa3.61□□□□□ -1.83
SQS1YNL224C ESC8Q08119 714 aa3.61□□□□□ -1.83
SQS1YNL224C BRX1Q08235 291 aaKnown RBP3.61□□□□□ -1.83
SQS1YNL224C TAF3Q12297 353 aa3.61□□□□□ -1.83
SQS1YNL224C INH1P01097 85 aa3.6□□□□□ -1.83
SQS1YNL224C PRT1P06103 763 aaKnown RBP3.6□□□□□ -1.83
SQS1YNL224C RAD3P06839 778 aa3.6□□□□□ -1.83
SQS1YNL224C MCM2P29469 868 aa3.6□□□□□ -1.83
SQS1YNL224C RIB7P33312 244 aa3.6□□□□□ -1.83
SQS1YNL224C SLX1P38324 304 aa3.6□□□□□ -1.83
SQS1YNL224C MSR1P38714 643 aa3.6□□□□□ -1.83
SQS1YNL224C HAL5P38970 855 aaKnown RBP3.6□□□□□ -1.83
SQS1YNL224C YJR061WP40355 935 aa3.6□□□□□ -1.83
SQS1YNL224C ALA1P40825 983 aaKnown RBP3.6□□□□□ -1.83
SQS1YNL224C VTC2P43585 828 aa3.6□□□□□ -1.83
SQS1YNL224C ARP9Q05123 467 aa3.6□□□□□ -1.83
SQS1YNL224C DON1Q05610 365 aa3.6□□□□□ -1.83
SQS1YNL224C YPL277CQ08989 487 aa3.6□□□□□ -1.83
SQS1YNL224C YRM1Q12340 786 aa3.6□□□□□ -1.83
SQS1YNL224C JIP3O13555 125 aa3.6□□□□□ -1.83
SQS1YNL224C STE6P12866 1290 aa3.6□□□□□ -1.83
SQS1YNL224C SET3P36124 751 aa3.6□□□□□ -1.83
SQS1YNL224C ECM4P36156 370 aa3.6□□□□□ -1.83
SQS1YNL224C PEX32P38292 413 aa3.6□□□□□ -1.83
SQS1YNL224C POP2P39008 433 aa3.6□□□□□ -1.83
SQS1YNL224C SPC72P39723 622 aa3.6□□□□□ -1.83
SQS1YNL224C SAP155P43612 1002 aa3.6□□□□□ -1.83
SQS1YNL224C RET2P43621 546 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms