RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C VBA5P36172 582 aa4.42□□□□□ -1.7
VPS9YML097C SEA4P38164 1038 aa4.42□□□□□ -1.7
VPS9YML097C RIM11P38615 370 aa4.42□□□□□ -1.7
VPS9YML097C SHU2P38957 223 aa4.42□□□□□ -1.7
VPS9YML097C SSB2P40150 613 aaKnown RBP4.42□□□□□ -1.7
VPS9YML097C KRI1P42846 591 aaKnown RBP4.42□□□□□ -1.7
VPS9YML097C SAP155P43612 1002 aa4.42□□□□□ -1.7
VPS9YML097C ROD1Q02805 837 aa4.42□□□□□ -1.7
VPS9YML097C EAF1Q06337 982 aa4.42□□□□□ -1.7
VPS9YML097C CIT1P00890 479 aa4.41□□□□□ -1.7
VPS9YML097C FUS1P11710 512 aa4.41□□□□□ -1.7
VPS9YML097C SEC23P15303 768 aaKnown RBP4.41□□□□□ -1.7
VPS9YML097C LYP1P32487 611 aa4.41□□□□□ -1.7
VPS9YML097C GRX4P32642 244 aa4.41□□□□□ -1.7
VPS9YML097C RER2P35196 286 aa4.41□□□□□ -1.7
VPS9YML097C GNP1P48813 663 aa4.41□□□□□ -1.7
VPS9YML097C UTP14Q04500 899 aaKnown RBP4.41□□□□□ -1.7
VPS9YML097C RSC2Q06488 889 aa4.41□□□□□ -1.7
VPS9YML097C REC8Q12188 680 aa4.41□□□□□ -1.7
VPS9YML097C CAN1P04817 590 aa4.4□□□□□ -1.7
VPS9YML097C HEM13P11353 328 aaKnown RBP4.4□□□□□ -1.7
VPS9YML097C AGP1P25376 633 aa4.4□□□□□ -1.7
VPS9YML097C MRP8P35719 219 aa4.4□□□□□ -1.7
VPS9YML097C YKL077WP36081 392 aa4.4□□□□□ -1.7
VPS9YML097C CRP1P38845 465 aaKnown RBP4.4□□□□□ -1.7
VPS9YML097C YEN1P40028 759 aa4.4□□□□□ -1.7
VPS9YML097C IRC24P40580 263 aa4.4□□□□□ -1.7
VPS9YML097C ATG36P46983 293 aa4.4□□□□□ -1.7
VPS9YML097C ERP6P53198 216 aa4.4□□□□□ -1.7
VPS9YML097C FMP25Q08023 583 aa4.4□□□□□ -1.7
VPS9YML097C INO1P11986 533 aa4.4□□□□□ -1.71
VPS9YML097C IDI1P15496 288 aa4.4□□□□□ -1.71
VPS9YML097C SBA1P28707 216 aaKnown RBP4.4□□□□□ -1.71
VPS9YML097C GGA2P38817 585 aaKnown RBP4.4□□□□□ -1.71
VPS9YML097C IRR1P40541 1150 aa4.4□□□□□ -1.71
VPS9YML097C HUL4P40985 892 aa4.4□□□□□ -1.71
VPS9YML097C ALR2P43553 858 aa4.4□□□□□ -1.71
VPS9YML097C SIW14P53965 281 aa4.4□□□□□ -1.71
VPS9YML097C DNM1P54861 757 aa4.4□□□□□ -1.71
VPS9YML097C YPL034WQ03083 165 aa4.4□□□□□ -1.71
VPS9YML097C GLO4Q12320 285 aa4.4□□□□□ -1.71
VPS9YML097C ADR1P07248 1323 aa4.39□□□□□ -1.71
VPS9YML097C PDC5P16467 563 aaKnown RBP4.39□□□□□ -1.71
VPS9YML097C MCM7P38132 845 aa4.39□□□□□ -1.71
VPS9YML097C HXT13P39924 564 aa4.39□□□□□ -1.71
VPS9YML097C YER156CP40093 338 aaKnown RBP4.39□□□□□ -1.71
VPS9YML097C YJR124CP47159 448 aa4.39□□□□□ -1.71
VPS9YML097C HXT17P53631 564 aa4.39□□□□□ -1.71
VPS9YML097C HXT15P54854 567 aa4.39□□□□□ -1.71
VPS9YML097C NOG1Q02892 647 aaKnown RBP4.39□□□□□ -1.71
VPS9YML097C TOP1P04786 769 aa4.38□□□□□ -1.71
VPS9YML097C TAF13P11747 167 aa4.38□□□□□ -1.71
VPS9YML097C SFP1P32432 683 aa4.38□□□□□ -1.71
VPS9YML097C PBY1P38254 753 aa4.38□□□□□ -1.71
VPS9YML097C ATG14P38270 344 aa4.38□□□□□ -1.71
VPS9YML097C MBP1P39678 833 aa4.38□□□□□ -1.71
VPS9YML097C NEO1P40527 1151 aa4.38□□□□□ -1.71
VPS9YML097C INP51P40559 946 aaKnown RBP4.38□□□□□ -1.71
VPS9YML097C PFD1P46988 109 aa4.38□□□□□ -1.71
VPS9YML097C RTA1P53047 317 aa4.38□□□□□ -1.71
VPS9YML097C YNR063WP53749 607 aa4.38□□□□□ -1.71
VPS9YML097C SHE9Q04172 456 aa4.38□□□□□ -1.71
VPS9YML097C EST2Q06163 884 aa4.38□□□□□ -1.71
VPS9YML097C NOP14Q99207 810 aaKnown RBP4.38□□□□□ -1.71
VPS9YML097C RPP1AP05318 106 aaPredicted RBP4.37□□□□□ -1.71
VPS9YML097C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
VPS9YML097C TY1A-LR4P0C2I8 440 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C TY1A-DR6P0CX70 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-ER1P0CX71 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-LR2P0CX72 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-PLP0CX73 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-JR1P0CX74 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-LR3P0CX75 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-ML2P0CX76 440 aa4.37□□□□□ -1.71
VPS9YML097C PUF4P25339 888 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
VPS9YML097C MKK2P32491 506 aa4.37□□□□□ -1.71
VPS9YML097C YKL107WP34251 309 aa4.37□□□□□ -1.71
VPS9YML097C TFA2P36145 328 aa4.37□□□□□ -1.71
VPS9YML097C EXO5P38289 585 aa4.37□□□□□ -1.71
VPS9YML097C NUG1P40010 520 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C FET4P40988 552 aa4.37□□□□□ -1.71
VPS9YML097C YGL176CP46945 554 aa4.37□□□□□ -1.71
VPS9YML097C YGL081WP53156 320 aa4.37□□□□□ -1.71
VPS9YML097C RAT1Q02792 1006 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C TIF35Q04067 274 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C AOS1Q06624 347 aa4.37□□□□□ -1.71
VPS9YML097C YDL124WQ07551 312 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C TY1A-GR1Q12085 440 aa4.37□□□□□ -1.71
VPS9YML097C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C TY1A-OLQ92392 440 aaKnown RBP4.37□□□□□ -1.71
VPS9YML097C MRP10O75012 95 aa4.36□□□□□ -1.71
VPS9YML097C PRP9P19736 530 aaKnown RBP4.36□□□□□ -1.71
VPS9YML097C PRP5P21372 849 aaPredicted RBP4.36□□□□□ -1.71
VPS9YML097C VMA4P22203 233 aaKnown RBP4.36□□□□□ -1.71
VPS9YML097C SYP1P25623 870 aaKnown RBP4.36□□□□□ -1.71
VPS9YML097C KNS1P32350 737 aaPredicted RBP4.36□□□□□ -1.71
VPS9YML097C CCC2P38995 1004 aa4.36□□□□□ -1.71
VPS9YML097C UBP12P39538 1254 aa4.36□□□□□ -1.71
VPS9YML097C MTR4P47047 1073 aaKnown RBP4.36□□□□□ -1.71
VPS9YML097C AVT1P47082 602 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms