RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C FYV10P40492 516 aa4.58□□□□□ -1.68
PBA1YLR199C ALD6P54115 500 aaKnown RBP4.58□□□□□ -1.68
PBA1YLR199C UBX5Q06682 500 aa4.58□□□□□ -1.68
PBA1YLR199C CIT2P08679 460 aa4.57□□□□□ -1.68
PBA1YLR199C YKL091CP33324 310 aaKnown RBP4.57□□□□□ -1.68
PBA1YLR199C PTC7P38797 343 aa4.57□□□□□ -1.68
PBA1YLR199C FPR3P38911 411 aaKnown RBP4.57□□□□□ -1.68
PBA1YLR199C IOC3P43596 787 aa4.57□□□□□ -1.68
PBA1YLR199C MEC3Q02574 474 aa4.57□□□□□ -1.68
PBA1YLR199C ALG6Q12001 544 aaKnown RBP4.57□□□□□ -1.68
PBA1YLR199C SWE1P32944 819 aa4.56□□□□□ -1.68
PBA1YLR199C TOM20P35180 183 aa4.56□□□□□ -1.68
PBA1YLR199C MAD1P40957 749 aa4.56□□□□□ -1.68
PBA1YLR199C OSW7P43611 510 aa4.56□□□□□ -1.68
PBA1YLR199C ALG12P53730 551 aa4.56□□□□□ -1.68
PBA1YLR199C CTR9P89105 1077 aa4.56□□□□□ -1.68
PBA1YLR199C TSR4P25040 408 aa4.55□□□□□ -1.68
PBA1YLR199C MCM2P29469 868 aa4.55□□□□□ -1.68
PBA1YLR199C REI1P38344 393 aaPredicted RBP4.55□□□□□ -1.68
PBA1YLR199C ETP1P38748 585 aaKnown RBP4.55□□□□□ -1.68
PBA1YLR199C GTS1P40956 396 aa4.55□□□□□ -1.68
PBA1YLR199C SUB1P54000 292 aaKnown RBP4.55□□□□□ -1.68
PBA1YLR199C VPS16Q03308 798 aa4.55□□□□□ -1.68
PBA1YLR199C YPL277CQ08989 487 aa4.55□□□□□ -1.68
PBA1YLR199C SMY2P32909 740 aaKnown RBP4.54□□□□□ -1.68
PBA1YLR199C YPT53P36019 220 aa4.54□□□□□ -1.68
PBA1YLR199C RIM11P38615 370 aa4.54□□□□□ -1.68
PBA1YLR199C CLU1Q03690 1277 aaKnown RBP4.54□□□□□ -1.68
PBA1YLR199C NSE3Q05541 303 aa4.54□□□□□ -1.68
PBA1YLR199C PIN2Q12057 282 aa4.54□□□□□ -1.68
PBA1YLR199C PNS1Q12412 539 aa4.54□□□□□ -1.68
PBA1YLR199C CMR1Q12510 522 aaKnown RBP4.54□□□□□ -1.68
PBA1YLR199C TUB2P02557 457 aaKnown RBP4.53□□□□□ -1.68
PBA1YLR199C RPS13P05756 151 aaKnown RBP4.53□□□□□ -1.68
PBA1YLR199C NPR1P22211 790 aa4.53□□□□□ -1.68
PBA1YLR199C UTP22P53254 1237 aaPredicted RBP4.53□□□□□ -1.68
PBA1YLR199C SPR28Q04921 423 aa4.53□□□□□ -1.68
PBA1YLR199C LSO1Q3E827 93 aa4.53□□□□□ -1.68
PBA1YLR199C COBP00163 385 aa4.52□□□□□ -1.69
PBA1YLR199C CTS1P29029 562 aa4.52□□□□□ -1.69
PBA1YLR199C SHM2P37291 469 aaKnown RBP4.52□□□□□ -1.69
PBA1YLR199C YJL049WP47048 450 aa4.52□□□□□ -1.69
PBA1YLR199C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
PBA1YLR199C RPN4Q03465 531 aa4.52□□□□□ -1.69
PBA1YLR199C URN1Q06525 465 aaKnown RBP4.52□□□□□ -1.69
PBA1YLR199C GPI13Q07830 1017 aa4.52□□□□□ -1.69
PBA1YLR199C WRS1Q12109 432 aaKnown RBP4.52□□□□□ -1.69
PBA1YLR199C SSF2Q12153 453 aaPredicted RBP4.52□□□□□ -1.69
PBA1YLR199C PHO4P07270 312 aaKnown RBP4.51□□□□□ -1.69
PBA1YLR199C RPT1P33299 467 aaKnown RBP4.51□□□□□ -1.69
PBA1YLR199C NNK1P36003 928 aa4.51□□□□□ -1.69
PBA1YLR199C YRB30P53107 440 aaPredicted RBP4.51□□□□□ -1.69
PBA1YLR199C YGR045CP53229 120 aa4.51□□□□□ -1.69
PBA1YLR199C ELA1P53861 379 aaPredicted RBP4.51□□□□□ -1.69
PBA1YLR199C RMD1Q03441 430 aa4.51□□□□□ -1.69
PBA1YLR199C TRS120Q04183 1289 aa4.51□□□□□ -1.69
PBA1YLR199C POB3Q04636 552 aaKnown RBP4.51□□□□□ -1.69
PBA1YLR199C YLR358CO13565 187 aa4.5□□□□□ -1.69
PBA1YLR199C STI1P15705 589 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
PBA1YLR199C CLN2P20438 545 aa4.5□□□□□ -1.69
PBA1YLR199C PRP5P21372 849 aaPredicted RBP4.5□□□□□ -1.69
PBA1YLR199C PBP2P38151 413 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
PBA1YLR199C BUD6P41697 788 aa4.5□□□□□ -1.69
PBA1YLR199C SNO2P53823 222 aa4.5□□□□□ -1.69
PBA1YLR199C VPS72Q03388 795 aa4.5□□□□□ -1.69
PBA1YLR199C SSB1P11484 613 aaKnown RBP4.49□□□□□ -1.69
PBA1YLR199C PEP7P32609 515 aa4.49□□□□□ -1.69
PBA1YLR199C SSB2P40150 613 aaKnown RBP4.49□□□□□ -1.69
PBA1YLR199C DAK2P43550 591 aa4.49□□□□□ -1.69
PBA1YLR199C CDC53Q12018 815 aaKnown RBP4.49□□□□□ -1.69
PBA1YLR199C SWR1Q05471 1514 aa4.48□□□□□ -1.69
PBA1YLR199C PRE10P21242 288 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
PBA1YLR199C RPS26AP39938 119 aaKnown RBP4.48□□□□□ -1.69
PBA1YLR199C RPS26BP39939 119 aaKnown RBP4.48□□□□□ -1.69
PBA1YLR199C PUS7Q08647 676 aaKnown RBP4.48□□□□□ -1.69
PBA1YLR199C YOR131CQ12486 218 aa4.48□□□□□ -1.69
PBA1YLR199C GRX4P32642 244 aa4.47□□□□□ -1.69
PBA1YLR199C DUR3P33413 735 aa4.47□□□□□ -1.69
PBA1YLR199C ECM2P38241 364 aaKnown RBP4.47□□□□□ -1.69
PBA1YLR199C FOL2P51601 243 aaKnown RBP4.47□□□□□ -1.69
PBA1YLR199C ESF1Q06344 628 aaKnown RBP4.47□□□□□ -1.69
PBA1YLR199C BDF2Q07442 638 aa4.47□□□□□ -1.69
PBA1YLR199C AVO1Q08236 1176 aa4.47□□□□□ -1.69
PBA1YLR199C BUD21Q08492 214 aaPredicted RBP4.47□□□□□ -1.69
PBA1YLR199C GCD6P32501 712 aaKnown RBP4.46□□□□□ -1.7
PBA1YLR199C MNN1P39106 762 aa4.46□□□□□ -1.7
PBA1YLR199C CWC24P53769 259 aa4.46□□□□□ -1.7
PBA1YLR199C TPP1Q03796 238 aa4.46□□□□□ -1.7
PBA1YLR199C YGR161W-CQ3E744 92 aa4.46□□□□□ -1.7
PBA1YLR199C CYC8P14922 966 aa4.45□□□□□ -1.7
PBA1YLR199C PET112P33893 541 aa4.45□□□□□ -1.7
PBA1YLR199C VPS35P34110 944 aa4.45□□□□□ -1.7
PBA1YLR199C MNR2P35724 969 aa4.45□□□□□ -1.7
PBA1YLR199C ARL1P38116 183 aaKnown RBP4.45□□□□□ -1.7
PBA1YLR199C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
PBA1YLR199C YGR122WP53272 402 aa4.45□□□□□ -1.7
PBA1YLR199C UFD2P54860 961 aa4.45□□□□□ -1.7
PBA1YLR199C MET6P05694 767 aaKnown RBP4.44□□□□□ -1.7
PBA1YLR199C YJR142WP47173 342 aa4.44□□□□□ -1.7
PBA1YLR199C YGL081WP53156 320 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms