RNA–Protein interactions for RNA: YLR090W

XDJ1, Transcript of Chaperone with a role in facilitating mitochondrial protein import, yeast

Gene XDJ1, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XDJ1	YLR090W	SEC20	P28791	383 aa		11.89	□□□□□ -0.51
XDJ1	YLR090W	NPR3	P38742	1146 aa		11.89	□□□□□ -0.51
XDJ1	YLR090W	PNT1	P38969	423 aa		11.89	□□□□□ -0.51
XDJ1	YLR090W	CCT3	P39077	534 aa	Known RBP	11.89	□□□□□ -0.51
XDJ1	YLR090W	SOL4	P53315	255 aa		11.89	□□□□□ -0.51
XDJ1	YLR090W	MYO1	P08964	1928 aa		11.88	□□□□□ -0.51
XDJ1	YLR090W	HXK1	P04806	485 aa	Known RBP	11.88	□□□□□ -0.51
XDJ1	YLR090W	RGP1	P16664	663 aa		11.88	□□□□□ -0.51
XDJ1	YLR090W	RFT1	P38206	574 aa	Predicted RBP	11.88	□□□□□ -0.51
XDJ1	YLR090W	YIL089W	P40500	205 aa		11.88	□□□□□ -0.51
XDJ1	YLR090W	LSB1	P53281	241 aa		11.88	□□□□□ -0.51
XDJ1	YLR090W	VMS1	Q04311	632 aa	Known RBP	11.88	□□□□□ -0.51
XDJ1	YLR090W	SUE1	Q06524	206 aa		11.88	□□□□□ -0.51
XDJ1	YLR090W	CSC1	Q06538	782 aa		11.88	□□□□□ -0.51
XDJ1	YLR090W	VIP1	Q06685	1146 aa	Known RBP	11.88	□□□□□ -0.51
XDJ1	YLR090W	SUB2	Q07478	446 aa	Known RBP	11.88	□□□□□ -0.51
XDJ1	YLR090W	DDP1	Q99321	188 aa	Known RBP	11.88	□□□□□ -0.51
XDJ1	YLR090W	TPM2	P40414	161 aa		11.87	□□□□□ -0.51
XDJ1	YLR090W	ASE1	P50275	885 aa		11.87	□□□□□ -0.51
XDJ1	YLR090W	RRT6	P53117	311 aa	Predicted RBP	11.87	□□□□□ -0.51
XDJ1	YLR090W	SGD1	Q06132	899 aa		11.87	□□□□□ -0.51
XDJ1	YLR090W	UTP4	Q06679	776 aa	Known RBP	11.87	□□□□□ -0.51
XDJ1	YLR090W	ETT1	Q08421	412 aa	Known RBP	11.87	□□□□□ -0.51
XDJ1	YLR090W	NBL1	Q3E7Y6	73 aa		11.87	□□□□□ -0.51
XDJ1	YLR090W	GPA1	P08539	472 aa		11.86	□□□□□ -0.51
XDJ1	YLR090W	PEX29	Q03370	554 aa		11.86	□□□□□ -0.51
XDJ1	YLR090W	TYW1	Q08960	810 aa	Known RBP	11.86	□□□□□ -0.51
XDJ1	YLR090W	TIP41	Q12199	356 aa		11.86	□□□□□ -0.51
XDJ1	YLR090W	RPL8A	P17076	256 aa	Known RBP	11.85	□□□□□ -0.51
XDJ1	YLR090W	URA1	P28272	314 aa	Predicted RBP	11.85	□□□□□ -0.51
XDJ1	YLR090W	OCT1	P35999	772 aa		11.85	□□□□□ -0.51
XDJ1	YLR090W	YER130C	P39959	443 aa		11.85	□□□□□ -0.51
XDJ1	YLR090W	YML037C	Q03703	340 aa		11.85	□□□□□ -0.51
XDJ1	YLR090W	SMD2	Q06217	110 aa	Known RBP	11.85	□□□□□ -0.51
XDJ1	YLR090W	MCM2	P29469	868 aa		11.84	□□□□□ -0.51
XDJ1	YLR090W	SAS3	P34218	831 aa		11.84	□□□□□ -0.51
XDJ1	YLR090W	RET3	P53600	189 aa		11.84	□□□□□ -0.51
XDJ1	YLR090W	PTC5	Q12511	572 aa		11.84	□□□□□ -0.51
XDJ1	YLR090W	FBP1	P09201	348 aa		11.83	□□□□□ -0.52
XDJ1	YLR090W	THR4	P16120	514 aa	Known RBP	11.83	□□□□□ -0.52
XDJ1	YLR090W	ALG1	P16661	449 aa		11.83	□□□□□ -0.52
XDJ1	YLR090W	YPT11	P48559	417 aa		11.83	□□□□□ -0.52
XDJ1	YLR090W	BNI5	P53890	448 aa	Known RBP	11.83	□□□□□ -0.52
XDJ1	YLR090W	YOR296W	Q08748	1289 aa		11.83	□□□□□ -0.52
XDJ1	YLR090W	ATE1	P16639	503 aa		11.82	□□□□□ -0.52
XDJ1	YLR090W	MCM3	P24279	971 aa	Known RBP	11.82	□□□□□ -0.52
XDJ1	YLR090W	MCM4	P30665	933 aa	Known RBP	11.82	□□□□□ -0.52
XDJ1	YLR090W	PHO88	P38264	188 aa	Predicted RBP	11.82	□□□□□ -0.52
XDJ1	YLR090W	LYS14	P40971	790 aa		11.82	□□□□□ -0.52
XDJ1	YLR090W	CUE3	P53137	624 aa	Known RBP	11.82	□□□□□ -0.52
XDJ1	YLR090W	EIS1	Q05050	843 aa	Known RBP	11.82	□□□□□ -0.52
XDJ1	YLR090W	MIC60	P36112	540 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	NDT80	P38830	627 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	STT3	P39007	718 aa	Known RBP	11.81	□□□□□ -0.52
XDJ1	YLR090W	FYV10	P40492	516 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	RTC4	P53850	401 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	TRS120	Q04183	1289 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	MMR1	Q06324	491 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	TFC8	Q12308	588 aa		11.81	□□□□□ -0.52
XDJ1	YLR090W	RAD18	P10862	487 aa		11.8	□□□□□ -0.52
XDJ1	YLR090W	YDJ1	P25491	409 aa	Known RBP	11.8	□□□□□ -0.52
XDJ1	YLR090W	PER1	P25625	357 aa		11.8	□□□□□ -0.52
XDJ1	YLR090W	PWP2	P25635	923 aa	Known RBP	11.8	□□□□□ -0.52
XDJ1	YLR090W	SRP40	P32583	406 aa	Predicted RBP	11.8	□□□□□ -0.52
XDJ1	YLR090W	YKT6	P36015	200 aa	Known RBP	11.8	□□□□□ -0.52
XDJ1	YLR090W	MRPL10	P36520	322 aa		11.8	□□□□□ -0.52
XDJ1	YLR090W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.8	□□□□□ -0.52	not detected
XDJ1	YLR090W	YJL007C	P47080	104 aa		11.8	□□□□□ -0.52
XDJ1	YLR090W	FMS1	P50264	508 aa		11.8	□□□□□ -0.52
XDJ1	YLR090W	DSE4	P53753	1117 aa		11.8	□□□□□ -0.52
XDJ1	YLR090W	PAN5	P38787	379 aa		11.79	□□□□□ -0.52
XDJ1	YLR090W	VAB2	P40003	282 aa		11.79	□□□□□ -0.52
XDJ1	YLR090W	CIT3	P43635	486 aa		11.79	□□□□□ -0.52
XDJ1	YLR090W	CSM3	Q04659	317 aa		11.79	□□□□□ -0.52
XDJ1	YLR090W	UBX5	Q06682	500 aa		11.79	□□□□□ -0.52
XDJ1	YLR090W	SLK19	Q08581	821 aa	Known RBP	11.79	□□□□□ -0.52
XDJ1	YLR090W	SRO9	P25567	434 aa	Known RBP	11.79	□□□□□ -0.52
XDJ1	YLR090W	YGR153W	P48238	217 aa		11.79	□□□□□ -0.52
XDJ1	YLR090W	RPL22A	P05749	121 aa	Known RBP	11.78	□□□□□ -0.52
XDJ1	YLR090W	SES1	P07284	462 aa	Known RBP	11.78	□□□□□ -0.52
XDJ1	YLR090W	BMH1	P29311	267 aa	Known RBP	11.78	□□□□□ -0.52
XDJ1	YLR090W	SUL1	P38359	859 aa		11.78	□□□□□ -0.52
XDJ1	YLR090W	HIS4	P00815	799 aa	Known RBP	11.77	□□□□□ -0.53
XDJ1	YLR090W	TGL1	P34163	548 aa		11.77	□□□□□ -0.53
XDJ1	YLR090W	ATG32	P40458	529 aa		11.77	□□□□□ -0.53
XDJ1	YLR090W	DAK2	P43550	591 aa		11.77	□□□□□ -0.53
XDJ1	YLR090W	NET1	P47035	1189 aa		11.77	□□□□□ -0.53
XDJ1	YLR090W	ALD6	P54115	500 aa	Known RBP	11.77	□□□□□ -0.53
XDJ1	YLR090W	AIM33	Q04516	312 aa		11.77	□□□□□ -0.53
XDJ1	YLR090W	TMA64	Q04600	565 aa	Known RBP	11.77	□□□□□ -0.53
XDJ1	YLR090W	OXR1	Q08952	273 aa		11.77	□□□□□ -0.53
XDJ1	YLR090W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
XDJ1	YLR090W	SAM1	P10659	382 aa	Known RBP	11.76	□□□□□ -0.53
XDJ1	YLR090W	TAF13	P11747	167 aa		11.76	□□□□□ -0.53
XDJ1	YLR090W	UGA4	P32837	571 aa		11.76	□□□□□ -0.53
XDJ1	YLR090W	MCD4	P36051	919 aa		11.76	□□□□□ -0.53
XDJ1	YLR090W	RRM3	P38766	723 aa		11.76	□□□□□ -0.53
XDJ1	YLR090W	YGR273C	P53329	174 aa		11.76	□□□□□ -0.53
XDJ1	YLR090W	TUF1	P02992	437 aa	Known RBP	11.75	□□□□□ -0.53
XDJ1	YLR090W	HVG1	P0CE11	249 aa		11.75	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms