RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C SRF1Q12516 437 aa5.36□□□□□ -1.55
CAF4YKR036C TIF6Q12522 245 aaKnown RBP5.36□□□□□ -1.55
CAF4YKR036C HPR1P17629 752 aaKnown RBP5.36□□□□□ -1.55
CAF4YKR036C MAL33P38157 468 aa5.36□□□□□ -1.55
CAF4YKR036C CST6P40535 587 aa5.36□□□□□ -1.55
CAF4YKR036C VPS75P53853 264 aa5.36□□□□□ -1.55
CAF4YKR036C FCP1Q03254 732 aa5.36□□□□□ -1.55
CAF4YKR036C ATG23Q06671 453 aa5.36□□□□□ -1.55
CAF4YKR036C GAS5Q08193 484 aa5.36□□□□□ -1.55
CAF4YKR036C CIR2Q08822 631 aa5.36□□□□□ -1.55
CAF4YKR036C YEL043WP32618 956 aa5.35□□□□□ -1.55
CAF4YKR036C RPS0AP32905 252 aaKnown RBP5.35□□□□□ -1.55
CAF4YKR036C YKR018CP36114 725 aa5.35□□□□□ -1.55
CAF4YKR036C AAP1P37898 856 aaKnown RBP5.35□□□□□ -1.55
CAF4YKR036C BSD2P38356 321 aa5.35□□□□□ -1.55
CAF4YKR036C YJR008WP47085 338 aa5.35□□□□□ -1.55
CAF4YKR036C ALF1P53904 254 aa5.35□□□□□ -1.55
CAF4YKR036C SEC5P89102 971 aa5.35□□□□□ -1.55
CAF4YKR036C VMS1Q04311 632 aaKnown RBP5.35□□□□□ -1.55
CAF4YKR036C EIS1Q05050 843 aaKnown RBP5.35□□□□□ -1.55
CAF4YKR036C TY4A-HQ6Q5P6 413 aa5.35□□□□□ -1.55
CAF4YKR036C FIG2P25653 1609 aa5.35□□□□□ -1.55
CAF4YKR036C YKR023WP36119 530 aaKnown RBP5.35□□□□□ -1.55
CAF4YKR036C PTC4P38089 393 aa5.35□□□□□ -1.55
CAF4YKR036C LAM1P38851 1228 aa5.35□□□□□ -1.55
CAF4YKR036C CAJ1P39101 391 aa5.35□□□□□ -1.55
CAF4YKR036C SEC9P40357 651 aa5.35□□□□□ -1.55
CAF4YKR036C MIC19P43594 170 aa5.35□□□□□ -1.55
CAF4YKR036C ILM1P47155 203 aa5.35□□□□□ -1.55
CAF4YKR036C BOP3P53958 396 aa5.35□□□□□ -1.55
CAF4YKR036C HVG1P0CE11 249 aa5.34□□□□□ -1.55
CAF4YKR036C KEX2P13134 814 aa5.34□□□□□ -1.55
CAF4YKR036C SDH2P21801 266 aa5.34□□□□□ -1.55
CAF4YKR036C ARG1P22768 420 aa5.34□□□□□ -1.55
CAF4YKR036C CLB4P24871 460 aa5.34□□□□□ -1.55
CAF4YKR036C BUD14P27637 709 aa5.34□□□□□ -1.55
CAF4YKR036C STO1P34160 861 aaKnown RBP5.34□□□□□ -1.55
CAF4YKR036C STV1P37296 890 aa5.34□□□□□ -1.55
CAF4YKR036C NOC2P39744 710 aaKnown RBP5.34□□□□□ -1.55
CAF4YKR036C MRX1P40050 688 aa5.34□□□□□ -1.55
CAF4YKR036C YLR177WQ06251 628 aa5.34□□□□□ -1.55
CAF4YKR036C RIM20Q12033 661 aa5.34□□□□□ -1.55
CAF4YKR036C ELG1Q12050 791 aa5.34□□□□□ -1.55
CAF4YKR036C HKR1P41809 1802 aa5.34□□□□□ -1.56
CAF4YKR036C TOM1Q03280 3268 aa5.33□□□□□ -1.56
CAF4YKR036C CDC37P06101 506 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C PDC1P06169 563 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C PHO13P19881 312 aa5.33□□□□□ -1.56
CAF4YKR036C IME1P21190 360 aa5.33□□□□□ -1.56
CAF4YKR036C RPL5P26321 297 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C TOM71P38825 639 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C VID28P40547 921 aa5.33□□□□□ -1.56
CAF4YKR036C SPR3P41901 512 aa5.33□□□□□ -1.56
CAF4YKR036C TRS85P46944 698 aa5.33□□□□□ -1.56
CAF4YKR036C VPS53P47061 822 aa5.33□□□□□ -1.56
CAF4YKR036C RRT6P53117 311 aaPredicted RBP5.33□□□□□ -1.56
CAF4YKR036C RPT4P53549 437 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C SEN54Q02825 467 aaPredicted RBP5.33□□□□□ -1.56
CAF4YKR036C ARR1Q06596 294 aa5.33□□□□□ -1.56
CAF4YKR036C YDR306CQ06640 478 aa5.33□□□□□ -1.56
CAF4YKR036C TMA16Q08687 178 aa5.33□□□□□ -1.56
CAF4YKR036C DUR1,2P32528 1835 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C RAD1P06777 1100 aa5.33□□□□□ -1.56
CAF4YKR036C RRP43P25359 394 aaPredicted RBP5.33□□□□□ -1.56
CAF4YKR036C MGM1P32266 881 aa5.33□□□□□ -1.56
CAF4YKR036C KAR9P32526 644 aa5.33□□□□□ -1.56
CAF4YKR036C NUP133P36161 1157 aa5.33□□□□□ -1.56
CAF4YKR036C SPL2P38839 148 aa5.33□□□□□ -1.56
CAF4YKR036C BUD16P39988 312 aa5.33□□□□□ -1.56
CAF4YKR036C TFG1P41895 735 aaPredicted RBP5.33□□□□□ -1.56
CAF4YKR036C GSM1P42950 618 aa5.33□□□□□ -1.56
CAF4YKR036C ENT3P47160 408 aa5.33□□□□□ -1.56
CAF4YKR036C MFM1Q02783 413 aa5.33□□□□□ -1.56
CAF4YKR036C TFB2Q02939 513 aa5.33□□□□□ -1.56
CAF4YKR036C PRP42Q03776 544 aaKnown RBP5.33□□□□□ -1.56
CAF4YKR036C OSH2Q12451 1283 aa5.33□□□□□ -1.56
CAF4YKR036C CBP1P07252 654 aa5.32□□□□□ -1.56
CAF4YKR036C MRP7P12687 371 aa5.32□□□□□ -1.56
CAF4YKR036C GCD2P12754 651 aaPredicted RBP5.32□□□□□ -1.56
CAF4YKR036C RAD24P32641 659 aa5.32□□□□□ -1.56
CAF4YKR036C NGR1P32831 672 aaKnown RBP5.32□□□□□ -1.56
CAF4YKR036C NFU1P32860 256 aa5.32□□□□□ -1.56
CAF4YKR036C TFC3P34111 1160 aa5.32□□□□□ -1.56
CAF4YKR036C RFT1P38206 574 aaPredicted RBP5.32□□□□□ -1.56
CAF4YKR036C PIH1P38768 344 aa5.32□□□□□ -1.56
CAF4YKR036C SET1P38827 1080 aaKnown RBP5.32□□□□□ -1.56
CAF4YKR036C YIL001WP40560 513 aa5.32□□□□□ -1.56
CAF4YKR036C NCS6P53088 359 aa5.32□□□□□ -1.56
CAF4YKR036C HUL5P53119 910 aa5.32□□□□□ -1.56
CAF4YKR036C SNU71P53207 620 aaKnown RBP5.32□□□□□ -1.56
CAF4YKR036C BET4Q00618 327 aa5.32□□□□□ -1.56
CAF4YKR036C VPS38Q05919 439 aa5.32□□□□□ -1.56
CAF4YKR036C RSA3Q05942 220 aaKnown RBP5.32□□□□□ -1.56
CAF4YKR036C NOP6Q07623 225 aaKnown RBP5.32□□□□□ -1.56
CAF4YKR036C PSK2Q08217 1101 aa5.32□□□□□ -1.56
CAF4YKR036C CSR2Q12734 1121 aa5.32□□□□□ -1.56
CAF4YKR036C SAC3P46674 1301 aa5.32□□□□□ -1.56
CAF4YKR036C PDR18P53756 1333 aa5.32□□□□□ -1.56
CAF4YKR036C TPM1P17536 199 aaKnown RBP5.31□□□□□ -1.56
CAF4YKR036C CDC3P32457 520 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms