RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W RAD2P07276 1031 aa7.76□□□□□ -1.17
MDH1YKL085W VPS8P39702 1274 aa7.76□□□□□ -1.17
MDH1YKL085W FOL2P51601 243 aaKnown RBP7.76□□□□□ -1.17
MDH1YKL085W MRD1Q06106 887 aaKnown RBP7.76□□□□□ -1.17
MDH1YKL085W POT1P27796 417 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
MDH1YKL085W MCM4P30665 933 aaKnown RBP7.75□□□□□ -1.17
MDH1YKL085W MCR1P36060 302 aaKnown RBP7.75□□□□□ -1.17
MDH1YKL085W FPR3P38911 411 aaKnown RBP7.75□□□□□ -1.17
MDH1YKL085W SLN1P39928 1220 aaPredicted RBP7.75□□□□□ -1.17
MDH1YKL085W MRPS35P53292 345 aa7.75□□□□□ -1.17
MDH1YKL085W PUF6Q04373 656 aaKnown RBP7.75□□□□□ -1.17
MDH1YKL085W TRM11Q12463 433 aa7.75□□□□□ -1.17
MDH1YKL085W TKL1P23254 680 aaKnown RBP7.74□□□□□ -1.17
MDH1YKL085W IRE1P32361 1115 aa7.74□□□□□ -1.17
MDH1YKL085W TFC4P33339 1025 aa7.74□□□□□ -1.17
MDH1YKL085W OSH3P38713 996 aaKnown RBP7.74□□□□□ -1.17
MDH1YKL085W NMD2P38798 1089 aaKnown RBP7.74□□□□□ -1.17
MDH1YKL085W VPS53P47061 822 aa7.74□□□□□ -1.17
MDH1YKL085W ENP2P48234 707 aaKnown RBP7.74□□□□□ -1.17
MDH1YKL085W ISA1Q07821 250 aaPredicted RBP7.74□□□□□ -1.17
MDH1YKL085W RTP1Q12751 981 aa7.74□□□□□ -1.17
MDH1YKL085W CAD1P24813 409 aaKnown RBP7.73□□□□□ -1.17
MDH1YKL085W TIM23P32897 222 aa7.73□□□□□ -1.17
MDH1YKL085W STM1P39015 273 aaKnown RBP7.73□□□□□ -1.17
MDH1YKL085W JHD1P40034 492 aa7.73□□□□□ -1.17
MDH1YKL085W RPS15Q01855 142 aaKnown RBP7.73□□□□□ -1.17
MDH1YKL085W MYO3P36006 1272 aa7.72□□□□□ -1.17
MDH1YKL085W GPT2P36148 743 aa7.72□□□□□ -1.17
MDH1YKL085W FLR1P38124 548 aa7.72□□□□□ -1.17
MDH1YKL085W PES4P39684 611 aa7.72□□□□□ -1.17
MDH1YKL085W RSC8P43609 557 aaKnown RBP7.72□□□□□ -1.17
MDH1YKL085W CTR1P49573 406 aa7.72□□□□□ -1.17
MDH1YKL085W FOL1P53848 824 aa7.72□□□□□ -1.17
MDH1YKL085W VPS72Q03388 795 aa7.72□□□□□ -1.17
MDH1YKL085W SUE1Q06524 206 aa7.72□□□□□ -1.17
MDH1YKL085W UTP4Q06679 776 aaKnown RBP7.72□□□□□ -1.17
MDH1YKL085W GUD1Q07729 489 aa7.72□□□□□ -1.17
MDH1YKL085W TOR1P35169 2470 aa7.72□□□□□ -1.17
MDH1YKL085W PHR1P05066 565 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
MDH1YKL085W NUC1P08466 329 aa7.71□□□□□ -1.18
MDH1YKL085W DSF2P38213 736 aa7.71□□□□□ -1.18
MDH1YKL085W REG2P38232 338 aa7.71□□□□□ -1.18
MDH1YKL085W YNL115CP53925 644 aa7.71□□□□□ -1.18
MDH1YKL085W VPS30Q02948 557 aa7.71□□□□□ -1.18
MDH1YKL085W OPI1P21957 404 aa7.7□□□□□ -1.18
MDH1YKL085W RIT1P23796 513 aa7.7□□□□□ -1.18
MDH1YKL085W KTR1P27810 393 aaKnown RBP7.7□□□□□ -1.18
MDH1YKL085W SEC8P32855 1065 aa7.7□□□□□ -1.18
MDH1YKL085W POA1P38218 177 aa7.7□□□□□ -1.18
MDH1YKL085W NDT80P38830 627 aa7.7□□□□□ -1.18
MDH1YKL085W RRP8P38961 392 aaKnown RBP7.7□□□□□ -1.18
MDH1YKL085W SGM1P47166 707 aa7.7□□□□□ -1.18
MDH1YKL085W YNR014WP53719 212 aa7.7□□□□□ -1.18
MDH1YKL085W UFD2P54860 961 aa7.7□□□□□ -1.18
MDH1YKL085W RGA2Q06407 1009 aa7.7□□□□□ -1.18
MDH1YKL085W FAB1P34756 2278 aa7.69□□□□□ -1.18
MDH1YKL085W PBS2P08018 668 aa7.69□□□□□ -1.18
MDH1YKL085W MAS2P11914 482 aa7.69□□□□□ -1.18
MDH1YKL085W DUR3P33413 735 aa7.69□□□□□ -1.18
MDH1YKL085W MET1P36150 593 aa7.69□□□□□ -1.18
MDH1YKL085W BRL1P38770 471 aa7.69□□□□□ -1.18
MDH1YKL085W AZR1P50080 613 aa7.69□□□□□ -1.18
MDH1YKL085W MCM6P53091 1017 aaKnown RBP7.69□□□□□ -1.18
MDH1YKL085W HDA1P53973 706 aa7.69□□□□□ -1.18
MDH1YKL085W BRE1Q07457 700 aaKnown RBP7.69□□□□□ -1.18
MDH1YKL085W CDC16P09798 840 aa7.68□□□□□ -1.18
MDH1YKL085W MRM1P25270 412 aa7.68□□□□□ -1.18
MDH1YKL085W ANP1P32629 500 aa7.68□□□□□ -1.18
MDH1YKL085W VPS45P38932 577 aa7.68□□□□□ -1.18
MDH1YKL085W TVP23P38962 199 aa7.68□□□□□ -1.18
MDH1YKL085W YLR326WQ06170 240 aaKnown RBP7.68□□□□□ -1.18
MDH1YKL085W DAP1Q12091 152 aa7.68□□□□□ -1.18
MDH1YKL085W RIF1P29539 1916 aa7.68□□□□□ -1.18
MDH1YKL085W SNA3P14359 133 aa7.67□□□□□ -1.18
MDH1YKL085W SRP54P20424 541 aaKnown RBP7.67□□□□□ -1.18
MDH1YKL085W YNR021WP53723 404 aaKnown RBP7.67□□□□□ -1.18
MDH1YKL085W ATG11Q12527 1178 aa7.67□□□□□ -1.18
MDH1YKL085W RPS7BP48164 190 aaKnown RBP7.66□□□□□ -1.18
MDH1YKL085W PTA1Q01329 785 aaPredicted RBP7.66□□□□□ -1.18
MDH1YKL085W RPT6Q01939 405 aaKnown RBP7.66□□□□□ -1.18
MDH1YKL085W MSC2Q03455 724 aa7.66□□□□□ -1.18
MDH1YKL085W RKM4Q12504 494 aa7.66□□□□□ -1.18
MDH1YKL085W FKS1P38631 1876 aaKnown RBP7.66□□□□□ -1.18
MDH1YKL085W RPL8BP29453 256 aaKnown RBP7.65□□□□□ -1.18
MDH1YKL085W INP51P40559 946 aaKnown RBP7.65□□□□□ -1.18
MDH1YKL085W FMS1P50264 508 aa7.65□□□□□ -1.18
MDH1YKL085W LIF1P53150 421 aa7.65□□□□□ -1.18
MDH1YKL085W MYO5Q04439 1219 aaKnown RBP7.65□□□□□ -1.18
MDH1YKL085W TEL1P38110 2787 aa7.64□□□□□ -1.19
MDH1YKL085W TY1B-AO13527 1196 aaKnown RBP7.64□□□□□ -1.19
MDH1YKL085W EMI2Q04409 500 aaKnown RBP7.64□□□□□ -1.19
MDH1YKL085W ESF1Q06344 628 aaKnown RBP7.64□□□□□ -1.19
MDH1YKL085W NUM1Q00402 2748 aa7.64□□□□□ -1.19
MDH1YKL085W SWI6P09959 803 aa7.63□□□□□ -1.19
MDH1YKL085W KIN82P25341 720 aa7.63□□□□□ -1.19
MDH1YKL085W UGA4P32837 571 aa7.63□□□□□ -1.19
MDH1YKL085W GUA1P38625 525 aaKnown RBP7.63□□□□□ -1.19
MDH1YKL085W ALD5P40047 520 aaKnown RBP7.63□□□□□ -1.19
MDH1YKL085W CSM2P40465 213 aa7.63□□□□□ -1.19
MDH1YKL085W CLF1Q12309 687 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms