RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W TY1A-LR4P0C2I8 440 aaKnown RBP7.24□□□□□ -1.25
SPC42YKL042W TY1A-DR6P0CX70 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-ER1P0CX71 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-LR2P0CX72 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-PLP0CX73 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-JR1P0CX74 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-LR3P0CX75 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-ML2P0CX76 440 aa7.24□□□□□ -1.25
SPC42YKL042W AGP1P25376 633 aa7.24□□□□□ -1.25
SPC42YKL042W FPR3P38911 411 aaKnown RBP7.24□□□□□ -1.25
SPC42YKL042W NEO1P40527 1151 aa7.24□□□□□ -1.25
SPC42YKL042W ROD1Q02805 837 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-GR1Q12085 440 aa7.24□□□□□ -1.25
SPC42YKL042W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.24□□□□□ -1.25
SPC42YKL042W TY1A-OLQ92392 440 aaKnown RBP7.24□□□□□ -1.25
SPC42YKL042W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25 RIP-Chip
SPC42YKL042W DED1P06634 604 aaKnown RBP7.23□□□□□ -1.25
SPC42YKL042W GUP1P53154 560 aa7.23□□□□□ -1.25
SPC42YKL042W YPL034WQ03083 165 aa7.23□□□□□ -1.25
SPC42YKL042W SBA1P28707 216 aaKnown RBP7.22□□□□□ -1.25
SPC42YKL042W ABD1P32783 436 aaPredicted RBP7.22□□□□□ -1.25
SPC42YKL042W YBR184WP38299 523 aa7.22□□□□□ -1.25
SPC42YKL042W MTR4P47047 1073 aaKnown RBP7.22□□□□□ -1.25
SPC42YKL042W HAS1Q03532 505 aaKnown RBP7.22□□□□□ -1.25
SPC42YKL042W ESC2Q06340 456 aa7.22□□□□□ -1.25
SPC42YKL042W SPO75Q07798 868 aa7.22□□□□□ -1.25
SPC42YKL042W FLC1Q08967 793 aa7.22□□□□□ -1.25
SPC42YKL042W MRP8P35719 219 aa7.21□□□□□ -1.26
SPC42YKL042W SEA4P38164 1038 aa7.21□□□□□ -1.26
SPC42YKL042W YHR020WP38708 688 aaKnown RBP7.21□□□□□ -1.26
SPC42YKL042W NUP82P40368 713 aa7.21□□□□□ -1.26
SPC42YKL042W UTP22P53254 1237 aaPredicted RBP7.21□□□□□ -1.26
SPC42YKL042W SHE9Q04172 456 aa7.21□□□□□ -1.26
SPC42YKL042W YLR225CQ05948 407 aaKnown RBP7.21□□□□□ -1.26
SPC42YKL042W EST2Q06163 884 aa7.21□□□□□ -1.26
SPC42YKL042W PPM2Q08282 695 aa7.21□□□□□ -1.26
SPC42YKL042W YIG1Q08956 461 aa7.21□□□□□ -1.26
SPC42YKL042W OSH2Q12451 1283 aa7.21□□□□□ -1.26
SPC42YKL042W NHA1Q99271 985 aa7.21□□□□□ -1.26
SPC42YKL042W MKK2P32491 506 aa7.2□□□□□ -1.26
SPC42YKL042W STE5P32917 917 aa7.2□□□□□ -1.26
SPC42YKL042W PGM2P37012 569 aaKnown RBP7.2□□□□□ -1.26
SPC42YKL042W NEM1P38757 446 aa7.2□□□□□ -1.26
SPC42YKL042W CHZ1P40019 153 aaPredicted RBP7.2□□□□□ -1.26
SPC42YKL042W LEM3P42838 414 aa7.2□□□□□ -1.26
SPC42YKL042W YGR125WP53273 1036 aa7.2□□□□□ -1.26
SPC42YKL042W MET6P05694 767 aaKnown RBP7.19□□□□□ -1.26
SPC42YKL042W TIM23P32897 222 aa7.19□□□□□ -1.26
SPC42YKL042W ADD66P36040 267 aa7.19□□□□□ -1.26
SPC42YKL042W VBA5P36172 582 aa7.19□□□□□ -1.26
SPC42YKL042W ALG14P38242 237 aa7.19□□□□□ -1.26
SPC42YKL042W ATG14P38270 344 aa7.19□□□□□ -1.26
SPC42YKL042W IRR1P40541 1150 aa7.19□□□□□ -1.26
SPC42YKL042W FAR11P53917 953 aa7.19□□□□□ -1.26
SPC42YKL042W UTP5Q04177 643 aaKnown RBP7.19□□□□□ -1.26
SPC42YKL042W INO1P11986 533 aa7.18□□□□□ -1.26
SPC42YKL042W GAL11P19659 1081 aa7.18□□□□□ -1.26
SPC42YKL042W SYP1P25623 870 aaKnown RBP7.18□□□□□ -1.26
SPC42YKL042W MOT2P34909 587 aaKnown RBP7.18□□□□□ -1.26
SPC42YKL042W RSP5P39940 809 aaKnown RBP7.18□□□□□ -1.26
SPC42YKL042W SLS1P42900 643 aa7.18□□□□□ -1.26
SPC42YKL042W BUD9P53226 547 aa7.18□□□□□ -1.26
SPC42YKL042W SOK2P53438 785 aaPredicted RBP7.18□□□□□ -1.26
SPC42YKL042W PHO8P11491 566 aa7.17□□□□□ -1.26
SPC42YKL042W HSP60P19882 572 aaKnown RBP7.17□□□□□ -1.26
SPC42YKL042W RPL8BP29453 256 aaKnown RBP7.17□□□□□ -1.26
SPC42YKL042W SPO71Q03868 1245 aa7.17□□□□□ -1.26
SPC42YKL042W TIF35Q04067 274 aaKnown RBP7.17□□□□□ -1.26
SPC42YKL042W POB3Q04636 552 aaKnown RBP7.17□□□□□ -1.26
SPC42YKL042W FMP25Q08023 583 aa7.17□□□□□ -1.26
SPC42YKL042W YLR125WQ12138 136 aa7.17□□□□□ -1.26
SPC42YKL042W ARL1P38116 183 aaKnown RBP7.16□□□□□ -1.26
SPC42YKL042W PBY1P38254 753 aa7.16□□□□□ -1.26
SPC42YKL042W ERP6P53198 216 aa7.16□□□□□ -1.26
SPC42YKL042W MEC3Q02574 474 aa7.16□□□□□ -1.26
SPC42YKL042W RAT1Q02792 1006 aaKnown RBP7.16□□□□□ -1.26
SPC42YKL042W RKM4Q12504 494 aa7.16□□□□□ -1.26
SPC42YKL042W CIT1P00890 479 aa7.15□□□□□ -1.26
SPC42YKL042W MAC1P35192 417 aa7.15□□□□□ -1.26
SPC42YKL042W GGA2P38817 585 aaKnown RBP7.15□□□□□ -1.26
SPC42YKL042W SNF7P39929 240 aaKnown RBP7.15□□□□□ -1.26
SPC42YKL042W GIP2P40036 548 aa7.15□□□□□ -1.26
SPC42YKL042W CNN1P43618 361 aa7.15□□□□□ -1.26
SPC42YKL042W GCV1P48015 400 aa7.15□□□□□ -1.26
SPC42YKL042W ALO1P54783 526 aaKnown RBP7.15□□□□□ -1.26
SPC42YKL042W RKM2Q03942 479 aa7.15□□□□□ -1.26
SPC42YKL042W EAF1Q06337 982 aa7.15□□□□□ -1.26
SPC42YKL042W DBP5P20449 482 aaKnown RBP7.14□□□□□ -1.27
SPC42YKL042W NAR1P23503 491 aaKnown RBP7.14□□□□□ -1.27
SPC42YKL042W ARE1P25628 610 aa7.14□□□□□ -1.27
SPC42YKL042W YKL107WP34251 309 aa7.14□□□□□ -1.27
SPC42YKL042W MCM7P38132 845 aa7.14□□□□□ -1.27
SPC42YKL042W PAN5P38787 379 aa7.14□□□□□ -1.27
SPC42YKL042W MNN1P39106 762 aa7.14□□□□□ -1.27
SPC42YKL042W PFD1P46988 109 aa7.14□□□□□ -1.27
SPC42YKL042W AOS1Q06624 347 aa7.14□□□□□ -1.27
SPC42YKL042W SLP1Q12232 587 aa7.14□□□□□ -1.27
SPC42YKL042W PIN4P34217 668 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SPC42YKL042W REI1P38344 393 aaPredicted RBP7.13□□□□□ -1.27
SPC42YKL042W YGL176CP46945 554 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms