RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W KTR2P33550 425 aa5.4□□□□□ -1.55
TFA1YKL028W YHL008CP38750 627 aa5.4□□□□□ -1.55
TFA1YKL028W RSP5P39940 809 aaKnown RBP5.4□□□□□ -1.55
TFA1YKL028W AIM21P40563 679 aa5.4□□□□□ -1.55
TFA1YKL028W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
TFA1YKL028W GIR2Q03768 265 aaPredicted RBP5.4□□□□□ -1.55
TFA1YKL028W NOC3Q07896 663 aaPredicted RBP5.4□□□□□ -1.55
TFA1YKL028W YOR296WQ08748 1289 aa5.4□□□□□ -1.55
TFA1YKL028W MCD1Q12158 566 aa5.4□□□□□ -1.55
TFA1YKL028W LIP5P32875 414 aa5.39□□□□□ -1.55
TFA1YKL028W MNN4P36044 1178 aa5.39□□□□□ -1.55
TFA1YKL028W BSD2P38356 321 aa5.39□□□□□ -1.55
TFA1YKL028W VPS27P40343 622 aaKnown RBP5.39□□□□□ -1.55
TFA1YKL028W MRPS18P42847 217 aa5.39□□□□□ -1.55
TFA1YKL028W COG4Q06096 861 aa5.39□□□□□ -1.55
TFA1YKL028W ADR1P07248 1323 aa5.38□□□□□ -1.55
TFA1YKL028W ERR1P0CX10 437 aa5.38□□□□□ -1.55
TFA1YKL028W ERR2P0CX11 437 aa5.38□□□□□ -1.55
TFA1YKL028W PRE9P23638 258 aaKnown RBP5.38□□□□□ -1.55
TFA1YKL028W DUT1P33317 147 aa5.38□□□□□ -1.55
TFA1YKL028W MPE1P35728 441 aaKnown RBP5.38□□□□□ -1.55
TFA1YKL028W YKL069WP36088 180 aa5.38□□□□□ -1.55
TFA1YKL028W NOC2P39744 710 aaKnown RBP5.38□□□□□ -1.55
TFA1YKL028W SVL3Q03088 825 aaKnown RBP5.38□□□□□ -1.55
TFA1YKL028W SPO20Q04359 397 aa5.38□□□□□ -1.55
TFA1YKL028W YOR378WQ08902 515 aa5.38□□□□□ -1.55
TFA1YKL028W TY1A-NL1Q12391 440 aaKnown RBP5.38□□□□□ -1.55
TFA1YKL028W MFT1P33441 392 aaKnown RBP5.37□□□□□ -1.55
TFA1YKL028W SAF1P38352 637 aa5.37□□□□□ -1.55
TFA1YKL028W CTH1P47976 325 aa5.37□□□□□ -1.55
TFA1YKL028W SUT1P53032 299 aaKnown RBP5.37□□□□□ -1.55
TFA1YKL028W RPL8AP17076 256 aaKnown RBP5.36□□□□□ -1.55
TFA1YKL028W MRPL33P20084 86 aa5.36□□□□□ -1.55
TFA1YKL028W VMA3P25515 160 aa5.36□□□□□ -1.55
TFA1YKL028W GGA2P38817 585 aaKnown RBP5.36□□□□□ -1.55
TFA1YKL028W AKR1P39010 764 aa5.36□□□□□ -1.55
TFA1YKL028W SNF7P39929 240 aaKnown RBP5.36□□□□□ -1.55
TFA1YKL028W POL5P39985 1022 aaKnown RBP5.36□□□□□ -1.55
TFA1YKL028W GIP2P40036 548 aa5.36□□□□□ -1.55
TFA1YKL028W RSC4Q02206 625 aa5.36□□□□□ -1.55
TFA1YKL028W DAL4Q04895 635 aa5.36□□□□□ -1.55
TFA1YKL028W BSC2Q05611 235 aa5.36□□□□□ -1.55
TFA1YKL028W SLX4Q12098 748 aa5.36□□□□□ -1.55
TFA1YKL028W FAL1Q12099 399 aaKnown RBP5.36□□□□□ -1.55
TFA1YKL028W TY4B-PA0A0B7P3V8 1104 aa5.35□□□□□ -1.55
TFA1YKL028W MSH2P25847 964 aa5.35□□□□□ -1.55
TFA1YKL028W CDC11P32458 415 aa5.35□□□□□ -1.55
TFA1YKL028W SMC1P32908 1225 aa5.35□□□□□ -1.55
TFA1YKL028W DYS1P38791 387 aa5.35□□□□□ -1.55
TFA1YKL028W RPT2P40327 437 aaKnown RBP5.35□□□□□ -1.55
TFA1YKL028W YGR125WP53273 1036 aa5.35□□□□□ -1.55
TFA1YKL028W YGR130CP53278 816 aa5.35□□□□□ -1.55
TFA1YKL028W SOK2P53438 785 aaPredicted RBP5.35□□□□□ -1.55
TFA1YKL028W ATG16Q03818 150 aa5.35□□□□□ -1.55
TFA1YKL028W AOS1Q06624 347 aa5.35□□□□□ -1.55
TFA1YKL028W NTG2Q08214 380 aa5.35□□□□□ -1.55
TFA1YKL028W TMA17Q12513 150 aa5.35□□□□□ -1.55
TFA1YKL028W TMA7Q3E764 64 aaKnown RBP5.35□□□□□ -1.55
TFA1YKL028W TY4A-HQ6Q5P6 413 aa5.35□□□□□ -1.55
TFA1YKL028W SFP1P32432 683 aa5.34□□□□□ -1.55
TFA1YKL028W PUB1P32588 453 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55 RIP-Chip
TFA1YKL028W GIP1P38229 639 aa5.34□□□□□ -1.55
TFA1YKL028W PPT1P53043 513 aa5.34□□□□□ -1.55
TFA1YKL028W YGR021WP53212 290 aa5.34□□□□□ -1.55
TFA1YKL028W RSC2Q06488 889 aa5.34□□□□□ -1.55
TFA1YKL028W SPO75Q07798 868 aa5.34□□□□□ -1.55
TFA1YKL028W OSH2Q12451 1283 aa5.34□□□□□ -1.55
TFA1YKL028W ATP4P05626 244 aa5.33□□□□□ -1.56
TFA1YKL028W CHS2P14180 963 aa5.33□□□□□ -1.56
TFA1YKL028W ESF2P53743 316 aaKnown RBP5.33□□□□□ -1.56
TFA1YKL028W BRE4Q07660 1125 aa5.33□□□□□ -1.56
TFA1YKL028W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
TFA1YKL028W REC8Q12188 680 aa5.33□□□□□ -1.56
TFA1YKL028W CIT1P00890 479 aa5.32□□□□□ -1.56
TFA1YKL028W CAN1P04817 590 aa5.32□□□□□ -1.56
TFA1YKL028W HSP60P19882 572 aaKnown RBP5.32□□□□□ -1.56
TFA1YKL028W BAS1P22035 811 aa5.32□□□□□ -1.56
TFA1YKL028W RPN12P32496 274 aa5.32□□□□□ -1.56
TFA1YKL028W ELM1P32801 640 aa5.32□□□□□ -1.56
TFA1YKL028W PRP40P33203 583 aaKnown RBP5.32□□□□□ -1.56
TFA1YKL028W ISW1P38144 1129 aa5.32□□□□□ -1.56
TFA1YKL028W YBR184WP38299 523 aa5.32□□□□□ -1.56
TFA1YKL028W YJL181WP46987 611 aa5.32□□□□□ -1.56
TFA1YKL028W DAS1P47005 663 aa5.32□□□□□ -1.56
TFA1YKL028W YPL109CQ02981 657 aa5.32□□□□□ -1.56
TFA1YKL028W ENT2Q05785 613 aa5.32□□□□□ -1.56
TFA1YKL028W YCS4Q06156 1176 aa5.32□□□□□ -1.56
TFA1YKL028W ATG13Q06628 738 aa5.32□□□□□ -1.56
TFA1YKL028W INP54Q08227 384 aaKnown RBP5.32□□□□□ -1.56
TFA1YKL028W RTT10Q08924 1013 aa5.32□□□□□ -1.56
TFA1YKL028W RPL8BP29453 256 aaKnown RBP5.31□□□□□ -1.56
TFA1YKL028W NAM7P30771 971 aaKnown RBP5.31□□□□□ -1.56
TFA1YKL028W TOA1P32773 286 aa5.31□□□□□ -1.56
TFA1YKL028W STE5P32917 917 aa5.31□□□□□ -1.56
TFA1YKL028W HXT8P40886 569 aa5.31□□□□□ -1.56
TFA1YKL028W YGR237CP50089 785 aa5.31□□□□□ -1.56
TFA1YKL028W DSE4P53753 1117 aa5.31□□□□□ -1.56
TFA1YKL028W KAR2P16474 682 aaKnown RBP5.31□□□□□ -1.56
TFA1YKL028W IES5P40060 125 aa5.31□□□□□ -1.56
TFA1YKL028W NIT1P40447 199 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms