RNA–Protein interactions for RNA: YJL143W

TIM17, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM17, Length 477 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM17	YJL143W	SUE1	Q06524	206 aa		11.88	□□□□□ -0.51
TIM17	YJL143W	PKC1	P24583	1151 aa		11.87	□□□□□ -0.51
TIM17	YJL143W	RRD1	P40454	393 aa	Known RBP	11.87	□□□□□ -0.51
TIM17	YJL143W	PIL1	P53252	339 aa	Known RBP	11.87	□□□□□ -0.51
TIM17	YJL143W	HRQ1	Q05549	1077 aa		11.87	□□□□□ -0.51
TIM17	YJL143W	CSC1	Q06538	782 aa		11.87	□□□□□ -0.51
TIM17	YJL143W	CDC19	P00549	500 aa	Known RBP	11.86	□□□□□ -0.51
TIM17	YJL143W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.86	□□□□□ -0.51	not detected
TIM17	YJL143W	IXR1	P33417	597 aa		11.86	□□□□□ -0.51
TIM17	YJL143W	BDH2	P39713	417 aa		11.86	□□□□□ -0.51
TIM17	YJL143W	FMS1	P50264	508 aa		11.86	□□□□□ -0.51
TIM17	YJL143W	ASE1	P50275	885 aa		11.86	□□□□□ -0.51
TIM17	YJL143W	HST1	P53685	503 aa		11.86	□□□□□ -0.51
TIM17	YJL143W	BNI5	P53890	448 aa	Known RBP	11.86	□□□□□ -0.51
TIM17	YJL143W	GET3	Q12154	354 aa	Known RBP	11.86	□□□□□ -0.51
TIM17	YJL143W	NBL1	Q3E7Y6	73 aa		11.86	□□□□□ -0.51
TIM17	YJL143W	CDC6	P09119	513 aa		11.85	□□□□□ -0.51
TIM17	YJL143W	EUG1	P32474	517 aa		11.85	□□□□□ -0.51
TIM17	YJL143W	TGL1	P34163	548 aa		11.85	□□□□□ -0.51
TIM17	YJL143W	HYR1	P40581	163 aa	Known RBP	11.85	□□□□□ -0.51
TIM17	YJL143W	GIS4	Q04233	774 aa		11.85	□□□□□ -0.51
TIM17	YJL143W	SPH1	Q06160	661 aa		11.85	□□□□□ -0.51
TIM17	YJL143W	TIP41	Q12199	356 aa		11.85	□□□□□ -0.51
TIM17	YJL143W	SAM1	P10659	382 aa	Known RBP	11.84	□□□□□ -0.51
TIM17	YJL143W	SRO9	P25567	434 aa	Known RBP	11.84	□□□□□ -0.51
TIM17	YJL143W	MAL33	P38157	468 aa		11.84	□□□□□ -0.51
TIM17	YJL143W	ATG1	P53104	897 aa		11.84	□□□□□ -0.51
TIM17	YJL143W	LIF1	P53150	421 aa		11.84	□□□□□ -0.51
TIM17	YJL143W	RET3	P53600	189 aa		11.84	□□□□□ -0.51
TIM17	YJL143W	CSM3	Q04659	317 aa		11.84	□□□□□ -0.51
TIM17	YJL143W	YLR225C	Q05948	407 aa	Known RBP	11.84	□□□□□ -0.51
TIM17	YJL143W	SMD2	Q06217	110 aa	Known RBP	11.84	□□□□□ -0.51
TIM17	YJL143W	GUD1	Q07729	489 aa		11.84	□□□□□ -0.51
TIM17	YJL143W	FKS1	P38631	1876 aa	Known RBP	11.83	□□□□□ -0.52
TIM17	YJL143W	TY1B-A	O13527	1196 aa	Known RBP	11.83	□□□□□ -0.52
TIM17	YJL143W	THR4	P16120	514 aa	Known RBP	11.83	□□□□□ -0.52
TIM17	YJL143W	PAN5	P38787	379 aa		11.83	□□□□□ -0.52
TIM17	YJL143W	YGL081W	P53156	320 aa		11.83	□□□□□ -0.52
TIM17	YJL143W	YGR125W	P53273	1036 aa		11.83	□□□□□ -0.52
TIM17	YJL143W	TMA64	Q04600	565 aa	Known RBP	11.83	□□□□□ -0.52
TIM17	YJL143W	SGD1	Q06132	899 aa		11.83	□□□□□ -0.52
TIM17	YJL143W	DCS2	Q12123	353 aa		11.83	□□□□□ -0.52
TIM17	YJL143W	SES1	P07284	462 aa	Known RBP	11.82	□□□□□ -0.52
TIM17	YJL143W	RDS1	P25611	832 aa		11.82	□□□□□ -0.52
TIM17	YJL143W	IME2	P32581	645 aa		11.82	□□□□□ -0.52
TIM17	YJL143W	UTR4	P32626	227 aa		11.82	□□□□□ -0.52
TIM17	YJL143W	RTC4	P53850	401 aa		11.82	□□□□□ -0.52
TIM17	YJL143W	VPS1	P21576	704 aa	Known RBP	11.81	□□□□□ -0.52
TIM17	YJL143W	UGA4	P32837	571 aa		11.81	□□□□□ -0.52
TIM17	YJL143W	MCR1	P36060	302 aa	Known RBP	11.81	□□□□□ -0.52
TIM17	YJL143W	COG8	Q04632	607 aa		11.81	□□□□□ -0.52
TIM17	YJL143W	PEX19	Q07418	342 aa		11.81	□□□□□ -0.52
TIM17	YJL143W	YOR296W	Q08748	1289 aa		11.81	□□□□□ -0.52
TIM17	YJL143W	SUL1	P38359	859 aa		11.8	□□□□□ -0.52
TIM17	YJL143W	NCS6	P53088	359 aa		11.8	□□□□□ -0.52
TIM17	YJL143W	DSE4	P53753	1117 aa		11.8	□□□□□ -0.52
TIM17	YJL143W	EAF7	P53911	425 aa	Known RBP	11.8	□□□□□ -0.52
TIM17	YJL143W	OYE2	Q03558	400 aa	Known RBP	11.8	□□□□□ -0.52
TIM17	YJL143W	HXK1	P04806	485 aa	Known RBP	11.79	□□□□□ -0.52
TIM17	YJL143W	KEX1	P09620	729 aa		11.79	□□□□□ -0.52
TIM17	YJL143W	ALG1	P16661	449 aa		11.79	□□□□□ -0.52
TIM17	YJL143W	NDT80	P38830	627 aa		11.79	□□□□□ -0.52
TIM17	YJL143W	DUS3	Q06053	668 aa	Known RBP	11.79	□□□□□ -0.52
TIM17	YJL143W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.79	□□□□□ -0.52	not detected
TIM17	YJL143W	RKM4	Q12504	494 aa		11.79	□□□□□ -0.52
TIM17	YJL143W	RGP1	P16664	663 aa		11.78	□□□□□ -0.52
TIM17	YJL143W	STT3	P39007	718 aa	Known RBP	11.78	□□□□□ -0.52
TIM17	YJL143W	MXR1	P40029	184 aa		11.78	□□□□□ -0.52
TIM17	YJL143W	TRS120	Q04183	1289 aa		11.78	□□□□□ -0.52
TIM17	YJL143W	ISA1	Q07821	250 aa	Predicted RBP	11.78	□□□□□ -0.52
TIM17	YJL143W	SLK19	Q08581	821 aa	Known RBP	11.78	□□□□□ -0.52
TIM17	YJL143W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.77	□□□□□ -0.53	not detected
TIM17	YJL143W	SRP40	P32583	406 aa	Predicted RBP	11.77	□□□□□ -0.53
TIM17	YJL143W	SEC8	P32855	1065 aa		11.77	□□□□□ -0.53
TIM17	YJL143W	SHP1	P34223	423 aa		11.77	□□□□□ -0.53
TIM17	YJL143W	HAP5	Q02516	242 aa		11.77	□□□□□ -0.53
TIM17	YJL143W	MFM1	Q02783	413 aa		11.77	□□□□□ -0.53
TIM17	YJL143W	OXR1	Q08952	273 aa		11.77	□□□□□ -0.53
TIM17	YJL143W	ECM29	P38737	1868 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	MCM3	P24279	971 aa	Known RBP	11.76	□□□□□ -0.53
TIM17	YJL143W	ELM1	P32801	640 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	RFT1	P38206	574 aa	Predicted RBP	11.76	□□□□□ -0.53
TIM17	YJL143W	VPS29	P38759	282 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	DJP1	P40564	432 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	CIT3	P43635	486 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	PTA1	Q01329	785 aa	Predicted RBP	11.76	□□□□□ -0.53
TIM17	YJL143W	EIS1	Q05050	843 aa	Known RBP	11.76	□□□□□ -0.53
TIM17	YJL143W	DUS4	Q06063	367 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	ETT1	Q08421	412 aa	Known RBP	11.76	□□□□□ -0.53
TIM17	YJL143W	AIM44	Q99299	758 aa		11.76	□□□□□ -0.53
TIM17	YJL143W	GSY1	P23337	708 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	RGT1	P32862	1170 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	ISW1	P38144	1129 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	HUL5	P53119	910 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	BUL2	Q03758	920 aa	Known RBP	11.75	□□□□□ -0.53
TIM17	YJL143W	AIM33	Q04516	312 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	MET7	Q08645	548 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	ARP6	Q12509	438 aa		11.75	□□□□□ -0.53
TIM17	YJL143W	TKL1	P23254	680 aa	Known RBP	11.74	□□□□□ -0.53
TIM17	YJL143W	MBR1	P23493	339 aa		11.74	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 511.2 ms