RNA–Protein interactions for RNA: YJL051W

IRC8, Transcript of Bud tip localized protein of unknown function, yeast

Gene IRC8, Length 2,469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC8	YJL051W	TPS3	P38426	1054 aa	Known RBP	2.61	□□□□□ -1.99
IRC8	YJL051W	HXT13	P39924	564 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	YTA6	P40328	754 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	RSM25	P40496	264 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	DOT5	P40553	215 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	VPS20	Q04272	221 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	DUR1,2	P32528	1835 aa	Known RBP	2.61	□□□□□ -1.99
IRC8	YJL051W	RIM15	P43565	1770 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	LEU1	P07264	779 aa	Known RBP	2.61	□□□□□ -1.99
IRC8	YJL051W	SWI5	P08153	709 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	ALG14	P38242	237 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	MED8	P38304	223 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	GUA1	P38625	525 aa	Known RBP	2.61	□□□□□ -1.99
IRC8	YJL051W	MSC7	P38694	644 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	CWH41	P53008	833 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	ENV11	P53246	860 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	HIM1	Q06674	414 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	BMS1	Q08965	1183 aa	Known RBP	2.61	□□□□□ -1.99
IRC8	YJL051W	GIN4	Q12263	1142 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	YOL087C	Q99247	1116 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	NHA1	Q99271	985 aa		2.61	□□□□□ -1.99
IRC8	YJL051W	RNR2	P09938	399 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	BIK1	P11709	440 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	GRX4	P32642	244 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	PRP40	P33203	583 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	PGM2	P37012	569 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	BRL1	P38770	471 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	ECM1	P39715	212 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
IRC8	YJL051W	FAR11	P53917	953 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	FPR4	Q06205	392 aa	Predicted RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	YPQ2	Q06328	317 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	APC11	Q12157	165 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	ADE6	P38972	1358 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	RPS19A	P07280	144 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	RPS19B	P07281	144 aa	Predicted RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	RGP1	P16664	663 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	MRPL10	P36520	322 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	AIM9	P40053	627 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	LYS4	P49367	693 aa	Predicted RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	INP52	P50942	1183 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	HXT17	P53631	564 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	MRS2	Q01926	470 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	FOX2	Q02207	900 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	SML1	Q04964	104 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	RLP24	Q07915	199 aa	Known RBP	2.6	□□□□□ -1.99
IRC8	YJL051W	SFI1	Q12369	946 aa		2.6	□□□□□ -1.99
IRC8	YJL051W	PET111	P08468	800 aa		2.59	□□□□□ -1.99
IRC8	YJL051W	RNA1	P11745	407 aa	Known RBP	2.59	□□□□□ -1.99
IRC8	YJL051W	PDI1	P17967	522 aa	Known RBP	2.59	□□□□□ -1.99
IRC8	YJL051W	MBR1	P23493	339 aa		2.59	□□□□□ -1.99
IRC8	YJL051W	DEP1	P31385	405 aa		2.59	□□□□□ -1.99
IRC8	YJL051W	BYE1	P36106	594 aa		2.59	□□□□□ -1.99
IRC8	YJL051W	RFC1	P38630	861 aa	Known RBP	2.59	□□□□□ -1.99
IRC8	YJL051W	GYP7	P48365	746 aa		2.59	□□□□□ -1.99
IRC8	YJL051W	ALD3	P54114	506 aa		2.59	□□□□□ -1.99
IRC8	YJL051W	RPO41	P13433	1351 aa	Known RBP	2.59	□□□□□ -1.99
IRC8	YJL051W	MRC1	P25588	1096 aa		2.59	□□□□□ -2
IRC8	YJL051W	SIC1	P38634	284 aa		2.59	□□□□□ -2
IRC8	YJL051W	YNG2	P38806	282 aa	Known RBP	2.59	□□□□□ -2
IRC8	YJL051W	YJL181W	P46987	611 aa		2.59	□□□□□ -2
IRC8	YJL051W	DSD1	P53095	428 aa		2.59	□□□□□ -2
IRC8	YJL051W	BUD9	P53226	547 aa		2.59	□□□□□ -2
IRC8	YJL051W	YNL165W	P53891	406 aa		2.59	□□□□□ -2
IRC8	YJL051W	YNL050C	P53952	270 aa		2.59	□□□□□ -2
IRC8	YJL051W	RNT1	Q02555	471 aa		2.59	□□□□□ -2
IRC8	YJL051W	TIM50	Q02776	476 aa		2.59	□□□□□ -2
IRC8	YJL051W	CSI1	Q04368	295 aa		2.59	□□□□□ -2
IRC8	YJL051W	CAB1	Q04430	367 aa		2.59	□□□□□ -2
IRC8	YJL051W	PEX19	Q07418	342 aa		2.59	□□□□□ -2
IRC8	YJL051W	RPS6A	P0CX37	236 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	RPS6B	P0CX38	236 aa	Predicted RBP	2.58	□□□□□ -2
IRC8	YJL051W	ATE1	P16639	503 aa		2.58	□□□□□ -2
IRC8	YJL051W	SRP54	P20424	541 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	MLF3	P32047	452 aa		2.58	□□□□□ -2
IRC8	YJL051W	GCD7	P32502	381 aa	Predicted RBP	2.58	□□□□□ -2
IRC8	YJL051W	DID4	P36108	232 aa		2.58	□□□□□ -2
IRC8	YJL051W	PAM1	P37304	830 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	NPR3	P38742	1146 aa		2.58	□□□□□ -2
IRC8	YJL051W	CCT5	P40413	562 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	PAP2	P53632	584 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	SSL2	Q00578	843 aa		2.58	□□□□□ -2
IRC8	YJL051W	SRT1	Q03175	343 aa		2.58	□□□□□ -2
IRC8	YJL051W	VPS72	Q03388	795 aa		2.58	□□□□□ -2
IRC8	YJL051W	STE11	P23561	717 aa		2.58	□□□□□ -2
IRC8	YJL051W	CLB1	P24868	471 aa		2.58	□□□□□ -2
IRC8	YJL051W	BIO2	P32451	375 aa		2.58	□□□□□ -2
IRC8	YJL051W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
IRC8	YJL051W	SPC42	P36094	363 aa		2.58	□□□□□ -2
IRC8	YJL051W	NMD2	P38798	1089 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	MAM1	P40065	302 aa		2.58	□□□□□ -2
IRC8	YJL051W	DSN1	P40568	576 aa		2.58	□□□□□ -2
IRC8	YJL051W	YGL140C	P53120	1219 aa		2.58	□□□□□ -2
IRC8	YJL051W	SPO1	P53541	631 aa		2.58	□□□□□ -2
IRC8	YJL051W	YNL108C	P53929	270 aa		2.58	□□□□□ -2
IRC8	YJL051W	ETT1	Q08421	412 aa	Known RBP	2.58	□□□□□ -2
IRC8	YJL051W	LEU2	P04173	364 aa	Predicted RBP	2.57	□□□□□ -2
IRC8	YJL051W	FRS2	P15625	503 aa	Known RBP	2.57	□□□□□ -2
IRC8	YJL051W	PRP5	P21372	849 aa	Predicted RBP	2.57	□□□□□ -2
IRC8	YJL051W	PPH3	P32345	308 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms