RNA–Protein interactions for RNA: YIR044C

YIR044C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR044C, Length 186 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR044C	YIR044C	SSF1	P38789	453 aa	Predicted RBP	2.69	□□□□□ -1.98
YIR044C	YIR044C	ATG1	P53104	897 aa		2.69	□□□□□ -1.98
YIR044C	YIR044C	SNO2	P53823	222 aa		2.69	□□□□□ -1.98
YIR044C	YIR044C	YLR257W	Q06146	321 aa	Known RBP	2.69	□□□□□ -1.98
YIR044C	YIR044C	YLR358C	O13565	187 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	TUB2	P02557	457 aa	Known RBP	2.68	□□□□□ -1.98
YIR044C	YIR044C	RET1	P22276	1149 aa	Known RBP	2.68	□□□□□ -1.98
YIR044C	YIR044C	YHL012W	P38709	493 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	NMD3	P38861	518 aa	Known RBP	2.68	□□□□□ -1.98
YIR044C	YIR044C	YAR028W	P39548	234 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	CDC55	Q00362	526 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	YDR132C	Q03900	495 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	TRS120	Q04183	1289 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	WHI5	Q12416	295 aa		2.68	□□□□□ -1.98
YIR044C	YIR044C	MDL2	P33311	773 aa		2.67	□□□□□ -1.98
YIR044C	YIR044C	YKL077W	P36081	392 aa		2.67	□□□□□ -1.98
YIR044C	YIR044C	ACF4	P47129	309 aa		2.67	□□□□□ -1.98
YIR044C	YIR044C	FOL2	P51601	243 aa	Known RBP	2.67	□□□□□ -1.98
YIR044C	YIR044C	MON1	P53129	644 aa		2.67	□□□□□ -1.98
YIR044C	YIR044C	TOS4	Q06266	489 aa		2.67	□□□□□ -1.98
YIR044C	YIR044C	RVS167	P39743	482 aa	Known RBP	2.66	□□□□□ -1.98
YIR044C	YIR044C	UTP5	Q04177	643 aa	Known RBP	2.66	□□□□□ -1.98
YIR044C	YIR044C	INP54	Q08227	384 aa	Known RBP	2.66	□□□□□ -1.98
YIR044C	YIR044C	PNS1	Q12412	539 aa		2.66	□□□□□ -1.98
YIR044C	YIR044C	SRO9	P25567	434 aa	Known RBP	2.65	□□□□□ -1.99
YIR044C	YIR044C	MET4	P32389	672 aa		2.65	□□□□□ -1.99
YIR044C	YIR044C	AIM26	P32858	118 aa		2.65	□□□□□ -1.99
YIR044C	YIR044C	TAT2	P38967	592 aa		2.65	□□□□□ -1.99
YIR044C	YIR044C	MTR4	P47047	1073 aa	Known RBP	2.65	□□□□□ -1.99
YIR044C	YIR044C	SEN54	Q02825	467 aa	Predicted RBP	2.65	□□□□□ -1.99
YIR044C	YIR044C	RSA3	Q05942	220 aa	Known RBP	2.65	□□□□□ -1.99
YIR044C	YIR044C	MSC6	Q08818	692 aa	Known RBP	2.65	□□□□□ -1.99
YIR044C	YIR044C	UGA4	P32837	571 aa		2.64	□□□□□ -1.99
YIR044C	YIR044C	YPT53	P36019	220 aa		2.64	□□□□□ -1.99
YIR044C	YIR044C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
YIR044C	YIR044C	YJL045W	P47052	634 aa		2.64	□□□□□ -1.99
YIR044C	YIR044C	NOG1	Q02892	647 aa	Known RBP	2.64	□□□□□ -1.99
YIR044C	YIR044C	RSC58	Q07979	502 aa		2.64	□□□□□ -1.99
YIR044C	YIR044C	HRK1	Q08732	759 aa	Known RBP	2.64	□□□□□ -1.99
YIR044C	YIR044C	ATE1	P16639	503 aa		2.63	□□□□□ -1.99
YIR044C	YIR044C	SHU2	P38957	223 aa		2.63	□□□□□ -1.99
YIR044C	YIR044C	MEF2	P39677	819 aa		2.63	□□□□□ -1.99
YIR044C	YIR044C	XKS1	P42826	600 aa		2.63	□□□□□ -1.99
YIR044C	YIR044C	SPT20	P50875	604 aa		2.63	□□□□□ -1.99
YIR044C	YIR044C	GCN5	Q03330	439 aa		2.63	□□□□□ -1.99
YIR044C	YIR044C	MSH3	P25336	1018 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	MCM2	P29469	868 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	YSC84	P32793	468 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	HSE1	P38753	452 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	QNS1	P38795	714 aa	Known RBP	2.62	□□□□□ -1.99
YIR044C	YIR044C	LAM1	P38851	1228 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	STM1	P39015	273 aa	Known RBP	2.62	□□□□□ -1.99
YIR044C	YIR044C	DAK2	P43550	591 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	ENV11	P53246	860 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	SLI1	P53304	468 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
YIR044C	YIR044C	SGD1	Q06132	899 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	RCL1	Q08096	367 aa	Predicted RBP	2.62	□□□□□ -1.99
YIR044C	YIR044C	PUS9	Q12069	462 aa		2.62	□□□□□ -1.99
YIR044C	YIR044C	PHO4	P07270	312 aa	Known RBP	2.61	□□□□□ -1.99
YIR044C	YIR044C	SPS1	P08458	490 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	RPT1	P33299	467 aa	Known RBP	2.61	□□□□□ -1.99
YIR044C	YIR044C	TRM2	P33753	639 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	POL32	P47110	350 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	YNR063W	P53749	607 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	DUS4	Q06063	367 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	YCS4	Q06156	1176 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	NOC3	Q07896	663 aa	Predicted RBP	2.61	□□□□□ -1.99
YIR044C	YIR044C	NOP8	Q08287	484 aa	Predicted RBP	2.61	□□□□□ -1.99
YIR044C	YIR044C	LAP2	Q10740	671 aa		2.61	□□□□□ -1.99
YIR044C	YIR044C	CYC1	P00044	109 aa	Predicted RBP	2.6	□□□□□ -1.99
YIR044C	YIR044C	VMA4	P22203	233 aa	Known RBP	2.6	□□□□□ -1.99
YIR044C	YIR044C	SLD2	P34252	453 aa		2.6	□□□□□ -1.99
YIR044C	YIR044C	MSE1	P48525	536 aa		2.6	□□□□□ -1.99
YIR044C	YIR044C	PLB2	Q03674	706 aa		2.6	□□□□□ -1.99
YIR044C	YIR044C	DAL4	Q04895	635 aa		2.6	□□□□□ -1.99
YIR044C	YIR044C	SPR28	Q04921	423 aa		2.6	□□□□□ -1.99
YIR044C	YIR044C	YOR352W	Q08816	343 aa		2.6	□□□□□ -1.99
YIR044C	YIR044C	SEC8	P32855	1065 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	DOM34	P33309	386 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	FAA3	P39002	694 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	SAM37	P50110	327 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	SUN4	P53616	420 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	PEX13	P80667	386 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	ROT1	Q03691	256 aa		2.59	□□□□□ -1.99
YIR044C	YIR044C	NBA1	Q08229	501 aa	Known RBP	2.59	□□□□□ -1.99
YIR044C	YIR044C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	RIP-Chip
YIR044C	YIR044C	HEM13	P11353	328 aa	Known RBP	2.58	□□□□□ -2
YIR044C	YIR044C	BAP2	P38084	609 aa		2.58	□□□□□ -2
YIR044C	YIR044C	RDH54	P38086	958 aa		2.58	□□□□□ -2
YIR044C	YIR044C	PPX1	P38698	397 aa		2.58	□□□□□ -2
YIR044C	YIR044C	RPS26A	P39938	119 aa	Known RBP	2.58	□□□□□ -2
YIR044C	YIR044C	RPS26B	P39939	119 aa	Known RBP	2.58	□□□□□ -2
YIR044C	YIR044C	SEC26	P41810	973 aa	Known RBP	2.58	□□□□□ -2
YIR044C	YIR044C	VPS53	P47061	822 aa		2.58	□□□□□ -2
YIR044C	YIR044C	OYE2	Q03558	400 aa	Known RBP	2.58	□□□□□ -2
YIR044C	YIR044C	RKM2	Q03942	479 aa		2.58	□□□□□ -2
YIR044C	YIR044C	SPO21	Q12411	609 aa		2.58	□□□□□ -2
YIR044C	YIR044C	SRM1	P21827	482 aa		2.57	□□□□□ -2
YIR044C	YIR044C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 95.6 ms