RNA–Protein interactions for RNA: YDR332W

IRC3, Transcript of Putative RNA helicase of the DEAH/D-box family, yeast

Gene IRC3, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC3	YDR332W	OSH2	Q12451	1283 aa		4.26	□□□□□ -1.73
IRC3	YDR332W	RPL8A	P17076	256 aa	Known RBP	4.25	□□□□□ -1.73
IRC3	YDR332W	PBY1	P38254	753 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	NEM1	P38757	446 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	GGA2	P38817	585 aa	Known RBP	4.25	□□□□□ -1.73
IRC3	YDR332W	MBP1	P39678	833 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	MSH4	P40965	878 aa	Predicted RBP	4.25	□□□□□ -1.73
IRC3	YDR332W	SLS1	P42900	643 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	LSB6	P42951	607 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	YGL081W	P53156	320 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	SPO20	Q04359	397 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	SOG2	Q08817	791 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	INO1	P11986	533 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	OSH7	P38755	437 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	YEN1	P40028	759 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	UTP5	Q04177	643 aa	Known RBP	4.25	□□□□□ -1.73
IRC3	YDR332W	EST2	Q06163	884 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	NTG2	Q08214	380 aa		4.25	□□□□□ -1.73
IRC3	YDR332W	GAL11	P19659	1081 aa		4.24	□□□□□ -1.73
IRC3	YDR332W	SRM1	P21827	482 aa		4.24	□□□□□ -1.73
IRC3	YDR332W	ARE1	P25628	610 aa		4.24	□□□□□ -1.73
IRC3	YDR332W	AFG2	P32794	780 aa		4.24	□□□□□ -1.73
IRC3	YDR332W	ERP6	P53198	216 aa		4.24	□□□□□ -1.73
IRC3	YDR332W	HBS1	P32769	611 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	CRP1	P38845	465 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	PRK1	P40494	810 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	RSC2	Q06488	889 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	DED1	P06634	604 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	SYP1	P25623	870 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	ENP1	P38333	483 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	SHU2	P38957	223 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	SIP5	P40210	489 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	MPH1	P40562	993 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	YGL176C	P46945	554 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	UBP2	Q01476	1272 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	HEH2	Q03281	663 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	HAS1	Q03532	505 aa	Known RBP	4.23	□□□□□ -1.73
IRC3	YDR332W	OPT2	Q06593	877 aa		4.23	□□□□□ -1.73
IRC3	YDR332W	ADR1	P07248	1323 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	TOP3	P13099	656 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	ADD66	P36040	267 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	YKL077W	P36081	392 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	NUG1	P40010	520 aa	Known RBP	4.22	□□□□□ -1.73
IRC3	YDR332W	ALR2	P43553	858 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	AOS1	Q06624	347 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
IRC3	YDR332W	GDH3	P39708	457 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	HUL4	P40985	892 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	RKM4	Q12504	494 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	HBN1	Q96VH4	193 aa		4.22	□□□□□ -1.73
IRC3	YDR332W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
IRC3	YDR332W	DBP5	P20449	482 aa	Known RBP	4.21	□□□□□ -1.74
IRC3	YDR332W	FET4	P40988	552 aa		4.21	□□□□□ -1.74
IRC3	YDR332W	CNN1	P43618	361 aa		4.21	□□□□□ -1.74
IRC3	YDR332W	UTP22	P53254	1237 aa	Predicted RBP	4.21	□□□□□ -1.74
IRC3	YDR332W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
IRC3	YDR332W	TY1A-DR2	Q03964	440 aa	Known RBP	4.21	□□□□□ -1.74
IRC3	YDR332W	YIG1	Q08956	461 aa		4.21	□□□□□ -1.74
IRC3	YDR332W	TY1A-BL	Q12266	440 aa		4.21	□□□□□ -1.74
IRC3	YDR332W	DIT1	P21623	536 aa		4.2	□□□□□ -1.74
IRC3	YDR332W	HSV2	P50079	448 aa	Predicted RBP	4.2	□□□□□ -1.74
IRC3	YDR332W	PAN5	P38787	379 aa		4.2	□□□□□ -1.74
IRC3	YDR332W	MTR4	P47047	1073 aa	Known RBP	4.2	□□□□□ -1.74
IRC3	YDR332W	FOL1	P53848	824 aa		4.2	□□□□□ -1.74
IRC3	YDR332W	UGO1	Q03327	502 aa		4.2	□□□□□ -1.74
IRC3	YDR332W	ATG13	Q06628	738 aa		4.2	□□□□□ -1.74
IRC3	YDR332W	YOL057W	Q08225	711 aa		4.2	□□□□□ -1.74
IRC3	YDR332W	MEF1	P25039	761 aa		4.19	□□□□□ -1.74
IRC3	YDR332W	YKL107W	P34251	309 aa		4.19	□□□□□ -1.74
IRC3	YDR332W	GUP1	P53154	560 aa		4.19	□□□□□ -1.74
IRC3	YDR332W	CUZ1	P53899	274 aa		4.19	□□□□□ -1.74
IRC3	YDR332W	TFB2	Q02939	513 aa		4.19	□□□□□ -1.74
IRC3	YDR332W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
IRC3	YDR332W	MLS1	P30952	554 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	PEX6	P33760	1030 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	GLY1	P37303	387 aa	Known RBP	4.18	□□□□□ -1.74
IRC3	YDR332W	PAF1	P38351	445 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	KRI1	P42846	591 aa	Known RBP	4.18	□□□□□ -1.74
IRC3	YDR332W	RPP1A	P05318	106 aa	Predicted RBP	4.18	□□□□□ -1.74
IRC3	YDR332W	ALG3	P38179	458 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	GPG1	P53130	126 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	MEC3	Q02574	474 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	RKM2	Q03942	479 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	YLR001C	Q07895	862 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	MDM12	Q92328	271 aa		4.18	□□□□□ -1.74
IRC3	YDR332W	PRP9	P19736	530 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	DBP2	P24783	546 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	ARL1	P38116	183 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	YBR284W	P38150	797 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	CCC2	P38995	1004 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	NEO1	P40527	1151 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	SPO74	P45819	413 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	YNL193W	P53870	558 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	MCM7	P38132	845 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	POL5	P39985	1022 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	SEC26	P41810	973 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	SOK2	P53438	785 aa	Predicted RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	YNR063W	P53749	607 aa		4.17	□□□□□ -1.74
IRC3	YDR332W	BUL2	Q03758	920 aa	Known RBP	4.17	□□□□□ -1.74
IRC3	YDR332W	TY1A-MR1	Q04215	440 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms