RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TVP15	YDR100W	AKR1	P39010	764 aa		5.03	□□□□□ -1.6
TVP15	YDR100W	SIW14	P53965	281 aa		5.03	□□□□□ -1.6
TVP15	YDR100W	ROD1	Q02805	837 aa		5.03	□□□□□ -1.6
TVP15	YDR100W	TMA46	Q12000	345 aa	Known RBP	5.03	□□□□□ -1.6
TVP15	YDR100W	WRS1	Q12109	432 aa	Known RBP	5.03	□□□□□ -1.6
TVP15	YDR100W	YLL054C	Q12244	843 aa		5.03	□□□□□ -1.6
TVP15	YDR100W	ADD66	P36040	267 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	HXT13	P39924	564 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	NNF1	P47149	201 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	YGR053C	P53234	283 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	HXT17	P53631	564 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	YNR063W	P53749	607 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	HXT15	P54854	567 aa		5.02	□□□□□ -1.61
TVP15	YDR100W	PRI2	P20457	528 aa		5.01	□□□□□ -1.61
TVP15	YDR100W	PGM1	P33401	570 aa	Known RBP	5.01	□□□□□ -1.61
TVP15	YDR100W	SPO74	P45819	413 aa		5.01	□□□□□ -1.61
TVP15	YDR100W	AVO1	Q08236	1176 aa		5.01	□□□□□ -1.61
TVP15	YDR100W	SBP1	P10080	294 aa	Known RBP	5	□□□□□ -1.61
TVP15	YDR100W	RER2	P35196	286 aa		5	□□□□□ -1.61
TVP15	YDR100W	YGR045C	P53229	120 aa		5	□□□□□ -1.61
TVP15	YDR100W	EEB1	Q02891	456 aa		5	□□□□□ -1.61
TVP15	YDR100W	COQ2	P32378	372 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	MKK2	P32491	506 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	YAR028W	P39548	234 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	ENT3	P47160	408 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	TYW3	P53177	273 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	ELA1	P53861	379 aa	Predicted RBP	4.99	□□□□□ -1.61
TVP15	YDR100W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
TVP15	YDR100W	DOT1	Q04089	582 aa	Known RBP	4.99	□□□□□ -1.61
TVP15	YDR100W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
TVP15	YDR100W	OPI10	Q08202	246 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	YOR223W	Q12015	292 aa		4.99	□□□□□ -1.61
TVP15	YDR100W	FAL1	Q12099	399 aa	Known RBP	4.99	□□□□□ -1.61
TVP15	YDR100W	SSF2	Q12153	453 aa	Predicted RBP	4.99	□□□□□ -1.61
TVP15	YDR100W	TRP2	P00899	507 aa	Known RBP	4.98	□□□□□ -1.61
TVP15	YDR100W	BAS1	P22035	811 aa		4.98	□□□□□ -1.61
TVP15	YDR100W	GPT2	P36148	743 aa		4.98	□□□□□ -1.61
TVP15	YDR100W	OCA5	P38738	679 aa		4.98	□□□□□ -1.61
TVP15	YDR100W	RAT1	Q02792	1006 aa	Known RBP	4.98	□□□□□ -1.61
TVP15	YDR100W	RKM2	Q03942	479 aa		4.98	□□□□□ -1.61
TVP15	YDR100W	LAP2	Q10740	671 aa		4.98	□□□□□ -1.61
TVP15	YDR100W	YLR122C	Q12312	125 aa		4.98	□□□□□ -1.61
TVP15	YDR100W	SYP1	P25623	870 aa	Known RBP	4.97	□□□□□ -1.61
TVP15	YDR100W	LYP1	P32487	611 aa		4.97	□□□□□ -1.61
TVP15	YDR100W	ALO1	P54783	526 aa	Known RBP	4.97	□□□□□ -1.61
TVP15	YDR100W	TRP3	P00937	484 aa		4.96	□□□□□ -1.62
TVP15	YDR100W	GRX1	P25373	110 aa	Known RBP	4.96	□□□□□ -1.62
TVP15	YDR100W	AFG2	P32794	780 aa		4.96	□□□□□ -1.62
TVP15	YDR100W	YKL069W	P36088	180 aa		4.96	□□□□□ -1.62
TVP15	YDR100W	SAF1	P38352	637 aa		4.96	□□□□□ -1.62
TVP15	YDR100W	SPO20	Q04359	397 aa		4.96	□□□□□ -1.62
TVP15	YDR100W	YLR225C	Q05948	407 aa	Known RBP	4.96	□□□□□ -1.62
TVP15	YDR100W	TDA5	Q06417	326 aa	Known RBP	4.96	□□□□□ -1.62
TVP15	YDR100W	MOT2	P34909	587 aa	Known RBP	4.95	□□□□□ -1.62
TVP15	YDR100W	KAE1	P36132	386 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	ALG3	P38179	458 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	HSE1	P38753	452 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	YGR130C	P53278	816 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	ORC1	P54784	914 aa	Predicted RBP	4.95	□□□□□ -1.62
TVP15	YDR100W	TIF35	Q04067	274 aa	Known RBP	4.95	□□□□□ -1.62
TVP15	YDR100W	GIC2	Q06648	383 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	YOL098C	Q12496	1037 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	PTC5	Q12511	572 aa		4.95	□□□□□ -1.62
TVP15	YDR100W	INO1	P11986	533 aa		4.94	□□□□□ -1.62
TVP15	YDR100W	CHS2	P14180	963 aa		4.94	□□□□□ -1.62
TVP15	YDR100W	DBP5	P20449	482 aa	Known RBP	4.94	□□□□□ -1.62
TVP15	YDR100W	ABD1	P32783	436 aa	Predicted RBP	4.94	□□□□□ -1.62
TVP15	YDR100W	MCM7	P38132	845 aa		4.94	□□□□□ -1.62
TVP15	YDR100W	SPF1	P39986	1215 aa	Known RBP	4.94	□□□□□ -1.62
TVP15	YDR100W	MSH4	P40965	878 aa	Predicted RBP	4.94	□□□□□ -1.62
TVP15	YDR100W	CNN1	P43618	361 aa		4.94	□□□□□ -1.62
TVP15	YDR100W	ESC2	Q06340	456 aa		4.94	□□□□□ -1.62
TVP15	YDR100W	RET1	P22276	1149 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
TVP15	YDR100W	NFS1	P25374	497 aa		4.93	□□□□□ -1.62
TVP15	YDR100W	WHI3	P34761	661 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	NNK1	P36003	928 aa		4.93	□□□□□ -1.62
TVP15	YDR100W	YKR073C	P36153	106 aa		4.93	□□□□□ -1.62
TVP15	YDR100W	QNS1	P38795	714 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	NMD3	P38861	518 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	KRI1	P42846	591 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	VPS53	P47061	822 aa		4.93	□□□□□ -1.62
TVP15	YDR100W	RSA3	Q05942	220 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	YLR257W	Q06146	321 aa	Known RBP	4.93	□□□□□ -1.62
TVP15	YDR100W	AOS1	Q06624	347 aa		4.93	□□□□□ -1.62
TVP15	YDR100W	YTA7	P40340	1379 aa		4.92	□□□□□ -1.62
TVP15	YDR100W	MLS1	P30952	554 aa		4.92	□□□□□ -1.62
TVP15	YDR100W	SMY2	P32909	740 aa	Known RBP	4.92	□□□□□ -1.62
TVP15	YDR100W	SEA4	P38164	1038 aa		4.92	□□□□□ -1.62
TVP15	YDR100W	YJL049W	P47048	450 aa		4.92	□□□□□ -1.62
TVP15	YDR100W	EAR1	Q03212	550 aa		4.92	□□□□□ -1.62
TVP15	YDR100W	RPS4A	P0CX35	261 aa	Known RBP	4.91	□□□□□ -1.62
TVP15	YDR100W	RPS4B	P0CX36	261 aa	Known RBP	4.91	□□□□□ -1.62
TVP15	YDR100W	AGP1	P25376	633 aa		4.91	□□□□□ -1.62
TVP15	YDR100W	SRP40	P32583	406 aa	Predicted RBP	4.91	□□□□□ -1.62
TVP15	YDR100W	RGD1	P38339	666 aa		4.91	□□□□□ -1.62
TVP15	YDR100W	IOC3	P43596	787 aa		4.91	□□□□□ -1.62
TVP15	YDR100W	YGL176C	P46945	554 aa		4.91	□□□□□ -1.62
TVP15	YDR100W	NAN1	Q02931	896 aa	Known RBP	4.91	□□□□□ -1.62
TVP15	YDR100W	RAD4	P14736	754 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms