RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C APC11Q12157 165 aa6.39□□□□□ -1.39
SCM3YDL139C COQ4O13525 335 aa6.38□□□□□ -1.39
SCM3YDL139C RPP0P05317 312 aaKnown RBP6.38□□□□□ -1.39
SCM3YDL139C MRPL33P20084 86 aa6.38□□□□□ -1.39
SCM3YDL139C HSP104P31539 908 aaKnown RBP6.38□□□□□ -1.39
SCM3YDL139C KTR2P33550 425 aa6.38□□□□□ -1.39
SCM3YDL139C RRT14P40470 206 aa6.38□□□□□ -1.39
SCM3YDL139C YNR040WP53736 256 aa6.38□□□□□ -1.39
SCM3YDL139C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
SCM3YDL139C SIR4P11978 1358 aa6.38□□□□□ -1.39
SCM3YDL139C VMA3P25515 160 aa6.37□□□□□ -1.39
SCM3YDL139C KNS1P32350 737 aaPredicted RBP6.37□□□□□ -1.39
SCM3YDL139C SKP1P52286 194 aa6.37□□□□□ -1.39
SCM3YDL139C SRT1Q03175 343 aa6.37□□□□□ -1.39
SCM3YDL139C RPC31P17890 251 aa6.36□□□□□ -1.39
SCM3YDL139C NCL1P38205 684 aaKnown RBP6.36□□□□□ -1.39
SCM3YDL139C BOI2P39969 1040 aa6.36□□□□□ -1.39
SCM3YDL139C LSB3P43603 459 aaKnown RBP6.36□□□□□ -1.39
SCM3YDL139C POL32P47110 350 aa6.36□□□□□ -1.39
SCM3YDL139C SUT1P53032 299 aaKnown RBP6.36□□□□□ -1.39
SCM3YDL139C ATE1P16639 503 aa6.35□□□□□ -1.39
SCM3YDL139C SWC3P31376 625 aa6.35□□□□□ -1.39
SCM3YDL139C NAB2P32505 525 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
SCM3YDL139C RAD24P32641 659 aa6.35□□□□□ -1.39
SCM3YDL139C HEH2Q03281 663 aa6.35□□□□□ -1.39
SCM3YDL139C TRS120Q04183 1289 aa6.35□□□□□ -1.39
SCM3YDL139C ALE1Q08548 619 aa6.35□□□□□ -1.39
SCM3YDL139C YPR053CQ6Q5F3 151 aa6.35□□□□□ -1.39
SCM3YDL139C APM2P38700 605 aa6.34□□□□□ -1.39
SCM3YDL139C PRK1P40494 810 aa6.34□□□□□ -1.39
SCM3YDL139C DOT5P40553 215 aa6.34□□□□□ -1.39
SCM3YDL139C CSI1Q04368 295 aa6.34□□□□□ -1.39
SCM3YDL139C RRP15Q06511 250 aaPredicted RBP6.34□□□□□ -1.39
SCM3YDL139C MET4P32389 672 aa6.33□□□□□ -1.4
SCM3YDL139C YNL050CP53952 270 aa6.33□□□□□ -1.4
SCM3YDL139C YMR187CQ03236 431 aa6.33□□□□□ -1.4
SCM3YDL139C GPI13Q07830 1017 aa6.33□□□□□ -1.4
SCM3YDL139C BMS1Q08965 1183 aaKnown RBP6.33□□□□□ -1.4
SCM3YDL139C PMD1P32634 1753 aa6.32□□□□□ -1.4
SCM3YDL139C OSM1P21375 501 aaKnown RBP6.32□□□□□ -1.4
SCM3YDL139C MET1P36150 593 aa6.32□□□□□ -1.4
SCM3YDL139C BSD2P38356 321 aa6.32□□□□□ -1.4
SCM3YDL139C DYS1P38791 387 aa6.32□□□□□ -1.4
SCM3YDL139C SNU71P53207 620 aaKnown RBP6.32□□□□□ -1.4
SCM3YDL139C MNL2Q12205 849 aa6.32□□□□□ -1.4
SCM3YDL139C ASF1P32447 279 aa6.31□□□□□ -1.4
SCM3YDL139C APL2P36000 726 aaPredicted RBP6.31□□□□□ -1.4
SCM3YDL139C YKR075CP36155 307 aa6.31□□□□□ -1.4
SCM3YDL139C LDH1P38139 375 aa6.31□□□□□ -1.4
SCM3YDL139C ITC1P53125 1264 aa6.31□□□□□ -1.4
SCM3YDL139C COBP00163 385 aa6.3□□□□□ -1.4
SCM3YDL139C MCX1P38323 520 aaPredicted RBP6.3□□□□□ -1.4
SCM3YDL139C HXT8P40886 569 aa6.3□□□□□ -1.4
SCM3YDL139C GYP7P48365 746 aa6.3□□□□□ -1.4
SCM3YDL139C UFD2P54860 961 aa6.3□□□□□ -1.4
SCM3YDL139C YOR296WQ08748 1289 aa6.3□□□□□ -1.4
SCM3YDL139C RAD4P14736 754 aa6.29□□□□□ -1.4
SCM3YDL139C YKL133CP36066 463 aa6.29□□□□□ -1.4
SCM3YDL139C PGM2P37012 569 aaKnown RBP6.29□□□□□ -1.4
SCM3YDL139C ALG14P38242 237 aa6.29□□□□□ -1.4
SCM3YDL139C IMH1Q06704 911 aaKnown RBP6.29□□□□□ -1.4
SCM3YDL139C SWI1P09547 1314 aa6.28□□□□□ -1.4
SCM3YDL139C MRP10O75012 95 aa6.28□□□□□ -1.4
SCM3YDL139C YCK2P23292 546 aaKnown RBP6.28□□□□□ -1.4
SCM3YDL139C GIP1P38229 639 aa6.28□□□□□ -1.4
SCM3YDL139C SLN1P39928 1220 aaPredicted RBP6.28□□□□□ -1.4
SCM3YDL139C CCT8P47079 568 aaKnown RBP6.28□□□□□ -1.4
SCM3YDL139C FCP1Q03254 732 aa6.28□□□□□ -1.4
SCM3YDL139C AOS1Q06624 347 aa6.28□□□□□ -1.4
SCM3YDL139C YDR306CQ06640 478 aa6.28□□□□□ -1.4
SCM3YDL139C IDI1P15496 288 aa6.27□□□□□ -1.41
SCM3YDL139C MSN1P22148 382 aa6.27□□□□□ -1.41
SCM3YDL139C PAM1P37304 830 aaKnown RBP6.27□□□□□ -1.41
SCM3YDL139C SKN7P38889 622 aa6.27□□□□□ -1.41
SCM3YDL139C ZDS1P50111 915 aaKnown RBP6.27□□□□□ -1.41
SCM3YDL139C YDR215CQ12240 137 aa6.27□□□□□ -1.41
SCM3YDL139C GLT1Q12680 2145 aaKnown RBP6.27□□□□□ -1.41
SCM3YDL139C NAR1P23503 491 aaKnown RBP6.26□□□□□ -1.41
SCM3YDL139C SMC1P32908 1225 aa6.26□□□□□ -1.41
SCM3YDL139C KTR3P38130 404 aaPredicted RBP6.26□□□□□ -1.41
SCM3YDL139C OPY1P38271 328 aa6.26□□□□□ -1.41
SCM3YDL139C NPR2P39923 615 aa6.26□□□□□ -1.41
SCM3YDL139C RGD2P43556 714 aa6.26□□□□□ -1.41
SCM3YDL139C PRY1P47032 299 aa6.26□□□□□ -1.41
SCM3YDL139C SPO1P53541 631 aa6.26□□□□□ -1.41
SCM3YDL139C NHA1Q99271 985 aa6.26□□□□□ -1.41
SCM3YDL139C PHO4P07270 312 aaKnown RBP6.25□□□□□ -1.41
SCM3YDL139C KCC4P25389 1037 aa6.25□□□□□ -1.41
SCM3YDL139C RAD55P38953 406 aa6.25□□□□□ -1.41
SCM3YDL139C YOL057WQ08225 711 aa6.25□□□□□ -1.41
SCM3YDL139C EDE1P34216 1381 aa6.24□□□□□ -1.41
SCM3YDL139C RAD2P07276 1031 aa6.24□□□□□ -1.41
SCM3YDL139C SCT1P32784 759 aa6.24□□□□□ -1.41
SCM3YDL139C SEC8P32855 1065 aa6.24□□□□□ -1.41
SCM3YDL139C ISW1P38144 1129 aa6.24□□□□□ -1.41
SCM3YDL139C RPN11P43588 306 aaKnown RBP6.24□□□□□ -1.41
SCM3YDL139C YJR107WP47145 328 aa6.24□□□□□ -1.41
SCM3YDL139C YNL011CP53980 444 aa6.24□□□□□ -1.41
SCM3YDL139C GIS4Q04233 774 aa6.24□□□□□ -1.41
SCM3YDL139C MRP7P12687 371 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms