RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W OPY1P38271 328 aa17.85■□□□□ 0.45
RPP1BYDL130W BRE5P53741 515 aaKnown RBP17.85■□□□□ 0.45
RPP1BYDL130W MSC6Q08818 692 aaKnown RBP17.85■□□□□ 0.45
RPP1BYDL130W TSR3Q12094 313 aaKnown RBP17.85■□□□□ 0.45
RPP1BYDL130W PHR1P05066 565 aaKnown RBP RIP-Chip data17.84■□□□□ 0.45not detected
RPP1BYDL130W HCA4P20448 770 aaKnown RBP17.84■□□□□ 0.45
RPP1BYDL130W BMH2P34730 273 aaKnown RBP17.84■□□□□ 0.45
RPP1BYDL130W MAC1P35192 417 aa17.84■□□□□ 0.45
RPP1BYDL130W ASE1P50275 885 aa17.84■□□□□ 0.45
RPP1BYDL130W SUT2Q12286 268 aa17.84■□□□□ 0.45
RPP1BYDL130W YJR107WP47145 328 aa17.83■□□□□ 0.44
RPP1BYDL130W STI1P15705 589 aaKnown RBP RIP-Chip data17.82■□□□□ 0.44not detected
RPP1BYDL130W TKL1P23254 680 aaKnown RBP17.82■□□□□ 0.44
RPP1BYDL130W MCM4P30665 933 aaKnown RBP17.82■□□□□ 0.44
RPP1BYDL130W LDH1P38139 375 aa17.82■□□□□ 0.44
RPP1BYDL130W RXT2P38255 430 aa17.82■□□□□ 0.44
RPP1BYDL130W UBP10P53874 792 aaPredicted RBP17.82■□□□□ 0.44
RPP1BYDL130W TY1B-AO13527 1196 aaKnown RBP17.81■□□□□ 0.44
RPP1BYDL130W SWI4P25302 1093 aaKnown RBP17.81■□□□□ 0.44
RPP1BYDL130W PRY3P47033 881 aa17.81■□□□□ 0.44
RPP1BYDL130W VPS53P47061 822 aa17.81■□□□□ 0.44
RPP1BYDL130W ISA1Q07821 250 aaPredicted RBP17.81■□□□□ 0.44
RPP1BYDL130W UGA4P32837 571 aa17.8■□□□□ 0.44
RPP1BYDL130W SEC8P32855 1065 aa17.8■□□□□ 0.44
RPP1BYDL130W REG2P38232 338 aa17.8■□□□□ 0.44
RPP1BYDL130W CCT3P39077 534 aaKnown RBP17.8■□□□□ 0.44
RPP1BYDL130W PCI8P40512 444 aa17.8■□□□□ 0.44
RPP1BYDL130W GDE1Q02979 1223 aa17.8■□□□□ 0.44
RPP1BYDL130W TFC4P33339 1025 aa17.79■□□□□ 0.44
RPP1BYDL130W PAN5P38787 379 aa17.79■□□□□ 0.44
RPP1BYDL130W YGL039WP53183 348 aaKnown RBP17.79■□□□□ 0.44
RPP1BYDL130W YUR1P26725 428 aa17.78■□□□□ 0.44
RPP1BYDL130W RPN10P38886 268 aaKnown RBP17.78■□□□□ 0.44
RPP1BYDL130W AIM21P40563 679 aa17.78■□□□□ 0.44
RPP1BYDL130W YDR461C-AQ2V2P7 80 aa17.78■□□□□ 0.44
RPP1BYDL130W MAK11P20484 414 aaKnown RBP17.77■□□□□ 0.44
RPP1BYDL130W DBP1P24784 617 aaKnown RBP17.77■□□□□ 0.44
RPP1BYDL130W YLR326WQ06170 240 aaKnown RBP17.77■□□□□ 0.44
RPP1BYDL130W OXR1Q08952 273 aa17.77■□□□□ 0.44
RPP1BYDL130W MYO1P08964 1928 aa17.76■□□□□ 0.43
RPP1BYDL130W SES1P07284 462 aaKnown RBP17.76■□□□□ 0.43
RPP1BYDL130W BCS1P32839 456 aa17.76■□□□□ 0.43
RPP1BYDL130W DBP7P36120 742 aaKnown RBP17.76■□□□□ 0.43
RPP1BYDL130W YHL017WP38745 532 aa17.76■□□□□ 0.43
RPP1BYDL130W PTA1Q01329 785 aaPredicted RBP17.76■□□□□ 0.43
RPP1BYDL130W GIS4Q04233 774 aa17.76■□□□□ 0.43
RPP1BYDL130W YLR407WQ06070 228 aa17.76■□□□□ 0.43
RPP1BYDL130W MAM3Q12296 706 aa17.76■□□□□ 0.43
RPP1BYDL130W MDM20Q12387 796 aaKnown RBP17.76■□□□□ 0.43
RPP1BYDL130W TRM11Q12463 433 aa17.76■□□□□ 0.43
RPP1BYDL130W SUL1P38359 859 aa17.75■□□□□ 0.43
RPP1BYDL130W AFG3P39925 761 aa17.75■□□□□ 0.43
RPP1BYDL130W BUD6P41697 788 aa17.75■□□□□ 0.43
RPP1BYDL130W ENT3P47160 408 aa17.75■□□□□ 0.43
RPP1BYDL130W YMR321CQ04898 105 aa17.75■□□□□ 0.43
RPP1BYDL130W SMD2Q06217 110 aaKnown RBP17.75■□□□□ 0.43
RPP1BYDL130W UIP5P36137 443 aa17.74■□□□□ 0.43
RPP1BYDL130W KSP1P38691 1029 aaKnown RBP17.74■□□□□ 0.43
RPP1BYDL130W CTR1P49573 406 aa17.74■□□□□ 0.43
RPP1BYDL130W CTF18P49956 741 aa17.74■□□□□ 0.43
RPP1BYDL130W YGL138CP53122 345 aa17.74■□□□□ 0.43
RPP1BYDL130W PSK2Q08217 1101 aa17.74■□□□□ 0.43
RPP1BYDL130W SAS3P34218 831 aa17.73■□□□□ 0.43
RPP1BYDL130W RLF2Q12495 606 aa17.73■□□□□ 0.43
RPP1BYDL130W PDC1P06169 563 aaKnown RBP17.72■□□□□ 0.43
RPP1BYDL130W POX1P13711 748 aa17.72■□□□□ 0.43
RPP1BYDL130W CBP3P21560 335 aa17.72■□□□□ 0.43
RPP1BYDL130W TIM23P32897 222 aa17.72■□□□□ 0.43
RPP1BYDL130W NOC2P39744 710 aaKnown RBP17.72■□□□□ 0.43
RPP1BYDL130W SCS3P53012 380 aa17.72■□□□□ 0.43
RPP1BYDL130W BNI5P53890 448 aaKnown RBP17.72■□□□□ 0.43
RPP1BYDL130W ARP6Q12509 438 aa17.72■□□□□ 0.43
RPP1BYDL130W SKP2P42843 763 aa17.71■□□□□ 0.43
RPP1BYDL130W CEX1Q12453 761 aa17.71■□□□□ 0.43
RPP1BYDL130W RPL19AP0CX82 189 aaKnown RBP17.7■□□□□ 0.42
RPP1BYDL130W RPL19BP0CX83 189 aaPredicted RBP17.7■□□□□ 0.42
RPP1BYDL130W NAF1P53919 492 aaKnown RBP17.7■□□□□ 0.42
RPP1BYDL130W HUL5P53119 910 aa17.69■□□□□ 0.42
RPP1BYDL130W ECM29P38737 1868 aa17.69■□□□□ 0.42
RPP1BYDL130W CDC6P09119 513 aa17.68■□□□□ 0.42
RPP1BYDL130W SRO9P25567 434 aaKnown RBP17.68■□□□□ 0.42
RPP1BYDL130W GPT2P36148 743 aa17.68■□□□□ 0.42
RPP1BYDL130W UBP15P50101 1230 aa17.68■□□□□ 0.42
RPP1BYDL130W YGR273CP53329 174 aa17.68■□□□□ 0.42
RPP1BYDL130W OYE2Q03558 400 aaKnown RBP17.68■□□□□ 0.42
RPP1BYDL130W CSM3Q04659 317 aa17.68■□□□□ 0.42
RPP1BYDL130W HSP82P02829 709 aaKnown RBP17.67■□□□□ 0.42
RPP1BYDL130W VPS1P21576 704 aaKnown RBP17.67■□□□□ 0.42
RPP1BYDL130W ECM30Q06673 1274 aa17.67■□□□□ 0.42
RPP1BYDL130W CLB5P30283 435 aa17.66■□□□□ 0.42
RPP1BYDL130W ASF1P32447 279 aa17.66■□□□□ 0.42
RPP1BYDL130W RET3P53600 189 aa17.66■□□□□ 0.42
RPP1BYDL130W DSE4P53753 1117 aa17.66■□□□□ 0.42
RPP1BYDL130W ORC4P54791 529 aa17.66■□□□□ 0.42
RPP1BYDL130W WHI4Q07655 649 aaKnown RBP17.66■□□□□ 0.42
RPP1BYDL130W VPS13Q07878 3144 aa17.65■□□□□ 0.42
RPP1BYDL130W ISW1P38144 1129 aa17.65■□□□□ 0.42
RPP1BYDL130W DAK1P54838 584 aaKnown RBP17.65■□□□□ 0.42
RPP1BYDL130W YPL034WQ03083 165 aa17.65■□□□□ 0.42
RPP1BYDL130W AIM33Q04516 312 aa17.65■□□□□ 0.42
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms