RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W SEC39Q12745 709 aa2.22□□□□□ -2.05
USO1YDL058W GSY1P23337 708 aa2.22□□□□□ -2.05
USO1YDL058W YKR015CP36111 568 aa2.22□□□□□ -2.05
USO1YDL058W MAD1P40957 749 aa2.22□□□□□ -2.05
USO1YDL058W ALG12P53730 551 aa2.22□□□□□ -2.05
USO1YDL058W YEL077CQ3E7X8 1277 aa2.22□□□□□ -2.05
USO1YDL058W SEC15P22224 910 aa2.21□□□□□ -2.06
USO1YDL058W RPC53P25441 422 aa2.21□□□□□ -2.06
USO1YDL058W RSC6P25632 483 aa2.21□□□□□ -2.06
USO1YDL058W TIF11P38912 153 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W RPN3P40016 523 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W IRC6P43615 237 aa2.21□□□□□ -2.06
USO1YDL058W YJR141WP47172 347 aaPredicted RBP2.21□□□□□ -2.06
USO1YDL058W GNP1P48813 663 aa2.21□□□□□ -2.06
USO1YDL058W FPK1P53739 893 aa2.21□□□□□ -2.06
USO1YDL058W HLR1Q04429 423 aa2.21□□□□□ -2.06
USO1YDL058W ATG23Q06671 453 aa2.21□□□□□ -2.06
USO1YDL058W CDC53Q12018 815 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W YVC1Q12324 675 aa2.21□□□□□ -2.06
USO1YDL058W CDC16P09798 840 aa2.21□□□□□ -2.06
USO1YDL058W MDJ1P35191 511 aa2.21□□□□□ -2.06
USO1YDL058W CAB2P40506 365 aa2.21□□□□□ -2.06
USO1YDL058W YDL183CP48569 320 aa2.21□□□□□ -2.06
USO1YDL058W VPS30Q02948 557 aa2.21□□□□□ -2.06
USO1YDL058W USA1Q03714 838 aa2.21□□□□□ -2.06
USO1YDL058W HDA3Q06623 655 aa2.21□□□□□ -2.06
USO1YDL058W TLG2Q08144 397 aa2.21□□□□□ -2.06
USO1YDL058W LEA1Q08963 238 aaPredicted RBP2.21□□□□□ -2.06
USO1YDL058W SPO21Q12411 609 aa2.21□□□□□ -2.06
USO1YDL058W VPS5Q92331 675 aa2.21□□□□□ -2.06
USO1YDL058W SRN2Q99176 213 aa2.21□□□□□ -2.06
USO1YDL058W SIN3P22579 1536 aa2.21□□□□□ -2.06
USO1YDL058W RGP1P16664 663 aa2.21□□□□□ -2.06
USO1YDL058W PRP5P21372 849 aaPredicted RBP2.21□□□□□ -2.06
USO1YDL058W YCR016WP25617 290 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W MRS6P32864 603 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W VPS21P36017 210 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W EXO84P38261 753 aa2.21□□□□□ -2.06
USO1YDL058W JEM1P40358 645 aa2.21□□□□□ -2.06
USO1YDL058W YJL070CP40361 888 aa2.21□□□□□ -2.06
USO1YDL058W NOP9P47077 666 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W URB2P47108 1174 aa2.21□□□□□ -2.06
USO1YDL058W KIP3P53086 805 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W YGL140CP53120 1219 aa2.21□□□□□ -2.06
USO1YDL058W CRN1Q06440 651 aa2.21□□□□□ -2.06
USO1YDL058W BUD4P47136 1447 aa2.21□□□□□ -2.06
USO1YDL058W RPP0P05317 312 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W MET6P05694 767 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W PRT1P06103 763 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W RDS1P25611 832 aa2.21□□□□□ -2.06
USO1YDL058W KIP2P28743 706 aa2.21□□□□□ -2.06
USO1YDL058W VMA8P32610 256 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W ARC19P33204 171 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W PXA2P34230 853 aa2.21□□□□□ -2.06
USO1YDL058W SCD5P34758 872 aa2.21□□□□□ -2.06
USO1YDL058W TGL4P36165 910 aa2.21□□□□□ -2.06
USO1YDL058W SLI15P38283 698 aa2.21□□□□□ -2.06
USO1YDL058W IRR1P40541 1150 aa2.21□□□□□ -2.06
USO1YDL058W ASE1P50275 885 aa2.21□□□□□ -2.06
USO1YDL058W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
USO1YDL058W MDM1Q01846 1127 aa2.21□□□□□ -2.06
USO1YDL058W SVL3Q03088 825 aaKnown RBP2.21□□□□□ -2.06
USO1YDL058W RCO1Q04779 684 aa2.21□□□□□ -2.06
USO1YDL058W REH1Q06709 432 aa2.21□□□□□ -2.06
USO1YDL058W YET3Q07451 203 aa2.21□□□□□ -2.06
USO1YDL058W YRM1Q12340 786 aa2.21□□□□□ -2.06
USO1YDL058W MYO2P19524 1574 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W AI2P03876 854 aa2.2□□□□□ -2.06
USO1YDL058W VAN1P23642 535 aa2.2□□□□□ -2.06
USO1YDL058W MCM10P32354 571 aa2.2□□□□□ -2.06
USO1YDL058W LRP1P38801 184 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W UTP25P40498 721 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W ISM1P48526 1002 aa2.2□□□□□ -2.06
USO1YDL058W SAP4P53036 818 aa2.2□□□□□ -2.06
USO1YDL058W SPC105P53148 917 aa2.2□□□□□ -2.06
USO1YDL058W YGR111WP53265 400 aa2.2□□□□□ -2.06
USO1YDL058W VPS16Q03308 798 aa2.2□□□□□ -2.06
USO1YDL058W GYL1Q04322 720 aa2.2□□□□□ -2.06
USO1YDL058W NNT1Q05874 261 aa2.2□□□□□ -2.06
USO1YDL058W BOP2Q06150 570 aa2.2□□□□□ -2.06
USO1YDL058W RTT10Q08924 1013 aa2.2□□□□□ -2.06
USO1YDL058W TSR3Q12094 313 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W NOT5Q12514 560 aaPredicted RBP2.2□□□□□ -2.06
USO1YDL058W BRF1P29056 596 aa2.2□□□□□ -2.06
USO1YDL058W SLA2P33338 968 aa2.2□□□□□ -2.06
USO1YDL058W STO1P34160 861 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W CPR5P35176 225 aa2.2□□□□□ -2.06
USO1YDL058W YAP3P38749 330 aa2.2□□□□□ -2.06
USO1YDL058W RSP5P39940 809 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W AIM9P40053 627 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W PEA2P40091 420 aa2.2□□□□□ -2.06
USO1YDL058W EPL1P43572 832 aa2.2□□□□□ -2.06
USO1YDL058W ARC1P46672 376 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W IMA1P53051 589 aa2.2□□□□□ -2.06
USO1YDL058W YDR341CQ05506 607 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W FRA1Q07825 749 aa2.2□□□□□ -2.06
USO1YDL058W MED4Q12343 284 aa2.2□□□□□ -2.06
USO1YDL058W SUP45P12385 437 aaKnown RBP2.2□□□□□ -2.06
USO1YDL058W RNP1P32385 249 aa2.2□□□□□ -2.06
USO1YDL058W APL6P46682 809 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms