RNA–Protein interactions for RNA: YBR291C

CTP1, Transcript of Mitochondrial inner membrane citrate transporter, yeast

Gene CTP1, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTP1	YBR291C	TRP2	P00899	507 aa	Known RBP	5.03	□□□□□ -1.6
CTP1	YBR291C	MKK2	P32491	506 aa		5.03	□□□□□ -1.6
CTP1	YBR291C	SKN7	P38889	622 aa		5.03	□□□□□ -1.6
CTP1	YBR291C	SPF1	P39986	1215 aa	Known RBP	5.03	□□□□□ -1.6
CTP1	YBR291C	TYW3	P53177	273 aa		5.03	□□□□□ -1.6
CTP1	YBR291C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
CTP1	YBR291C	TDA6	Q06466	467 aa		5.03	□□□□□ -1.6
CTP1	YBR291C	FAL1	Q12099	399 aa	Known RBP	5.03	□□□□□ -1.6
CTP1	YBR291C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
CTP1	YBR291C	ERS1	P17261	260 aa		5.02	□□□□□ -1.61
CTP1	YBR291C	GRX1	P25373	110 aa	Known RBP	5.02	□□□□□ -1.61
CTP1	YBR291C	ATG14	P38270	344 aa		5.02	□□□□□ -1.61
CTP1	YBR291C	TAT2	P38967	592 aa		5.02	□□□□□ -1.61
CTP1	YBR291C	TDA5	Q06417	326 aa	Known RBP	5.02	□□□□□ -1.61
CTP1	YBR291C	YOR223W	Q12015	292 aa		5.02	□□□□□ -1.61
CTP1	YBR291C	AGP1	P25376	633 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	SYP1	P25623	870 aa	Known RBP	5.01	□□□□□ -1.61
CTP1	YBR291C	SBA1	P28707	216 aa	Known RBP	5.01	□□□□□ -1.61
CTP1	YBR291C	SFA1	P32771	386 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	RRM3	P38766	723 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	IOC3	P43596	787 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	NAN1	Q02931	896 aa	Known RBP	5.01	□□□□□ -1.61
CTP1	YBR291C	SHE9	Q04172	456 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	YMR074C	Q04773	145 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	NSE3	Q05541	303 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	LAP2	Q10740	671 aa		5.01	□□□□□ -1.61
CTP1	YBR291C	DED1	P06634	604 aa	Known RBP	5	□□□□□ -1.61
CTP1	YBR291C	DBP5	P20449	482 aa	Known RBP	5	□□□□□ -1.61
CTP1	YBR291C	BAS1	P22035	811 aa		5	□□□□□ -1.61
CTP1	YBR291C	YKL069W	P36088	180 aa		5	□□□□□ -1.61
CTP1	YBR291C	HSE1	P38753	452 aa		5	□□□□□ -1.61
CTP1	YBR291C	YAR028W	P39548	234 aa		5	□□□□□ -1.61
CTP1	YBR291C	SNF7	P39929	240 aa	Known RBP	5	□□□□□ -1.61
CTP1	YBR291C	BOI2	P39969	1040 aa		5	□□□□□ -1.61
CTP1	YBR291C	CNN1	P43618	361 aa		5	□□□□□ -1.61
CTP1	YBR291C	TY1A-NL1	Q12391	440 aa	Known RBP	5	□□□□□ -1.61
CTP1	YBR291C	PRI2	P20457	528 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	SRP40	P32583	406 aa	Predicted RBP	4.99	□□□□□ -1.61
CTP1	YBR291C	AFG2	P32794	780 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	SBE2	P42223	864 aa	Known RBP	4.99	□□□□□ -1.61
CTP1	YBR291C	VPS53	P47061	822 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	KIP3	P53086	805 aa	Known RBP	4.99	□□□□□ -1.61
CTP1	YBR291C	YGR045C	P53229	120 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	RAT1	Q02792	1006 aa	Known RBP	4.99	□□□□□ -1.61
CTP1	YBR291C	TIF35	Q04067	274 aa	Known RBP	4.99	□□□□□ -1.61
CTP1	YBR291C	BDF2	Q07442	638 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	AVO1	Q08236	1176 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	RKM4	Q12504	494 aa		4.99	□□□□□ -1.61
CTP1	YBR291C	INO1	P11986	533 aa		4.98	□□□□□ -1.61
CTP1	YBR291C	MRP8	P35719	219 aa		4.98	□□□□□ -1.61
CTP1	YBR291C	MCX1	P38323	520 aa	Predicted RBP	4.98	□□□□□ -1.61
CTP1	YBR291C	RGD1	P38339	666 aa		4.98	□□□□□ -1.61
CTP1	YBR291C	SPO74	P45819	413 aa		4.98	□□□□□ -1.61
CTP1	YBR291C	HNT2	P49775	206 aa		4.98	□□□□□ -1.61
CTP1	YBR291C	RPN4	Q03465	531 aa		4.98	□□□□□ -1.61
CTP1	YBR291C	DOT1	Q04089	582 aa	Known RBP	4.98	□□□□□ -1.61
CTP1	YBR291C	ALG6	Q12001	544 aa	Known RBP	4.98	□□□□□ -1.61
CTP1	YBR291C	SEA4	P38164	1038 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	ALG3	P38179	458 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	IRR1	P40541	1150 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	MPH1	P40562	993 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	BUD9	P53226	547 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	NCE103	P53615	221 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	CDC53	Q12018	815 aa	Known RBP	4.97	□□□□□ -1.61
CTP1	YBR291C	PTC5	Q12511	572 aa		4.97	□□□□□ -1.61
CTP1	YBR291C	AI3	P03877	415 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	RAD4	P14736	754 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	ABD1	P32783	436 aa	Predicted RBP	4.96	□□□□□ -1.62
CTP1	YBR291C	YKL091C	P33324	310 aa	Known RBP	4.96	□□□□□ -1.62
CTP1	YBR291C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
CTP1	YBR291C	YKL107W	P34251	309 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	NNK1	P36003	928 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	OSW7	P43611	510 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	YNR063W	P53749	607 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	YLR225C	Q05948	407 aa	Known RBP	4.96	□□□□□ -1.62
CTP1	YBR291C	AOS1	Q06624	347 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	YPL260W	Q08977	551 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	YOR131C	Q12486	218 aa		4.96	□□□□□ -1.62
CTP1	YBR291C	RSC6	P25632	483 aa		4.95	□□□□□ -1.62
CTP1	YBR291C	SMY2	P32909	740 aa	Known RBP	4.95	□□□□□ -1.62
CTP1	YBR291C	STE5	P32917	917 aa		4.95	□□□□□ -1.62
CTP1	YBR291C	VBA5	P36172	582 aa		4.95	□□□□□ -1.62
CTP1	YBR291C	PBY1	P38254	753 aa		4.95	□□□□□ -1.62
CTP1	YBR291C	QNS1	P38795	714 aa	Known RBP	4.95	□□□□□ -1.62
CTP1	YBR291C	NMD2	P38798	1089 aa	Known RBP	4.95	□□□□□ -1.62
CTP1	YBR291C	ELA1	P53861	379 aa	Predicted RBP	4.95	□□□□□ -1.62
CTP1	YBR291C	RSA3	Q05942	220 aa	Known RBP	4.95	□□□□□ -1.62
CTP1	YBR291C	GNT1	Q12096	491 aa		4.95	□□□□□ -1.62
CTP1	YBR291C	MOT2	P34909	587 aa	Known RBP	4.94	□□□□□ -1.62
CTP1	YBR291C	YBR184W	P38299	523 aa		4.94	□□□□□ -1.62
CTP1	YBR291C	MSH4	P40965	878 aa	Predicted RBP	4.94	□□□□□ -1.62
CTP1	YBR291C	BUD6	P41697	788 aa		4.94	□□□□□ -1.62
CTP1	YBR291C	TIM54	P47045	478 aa		4.94	□□□□□ -1.62
CTP1	YBR291C	HUL5	P53119	910 aa		4.94	□□□□□ -1.62
CTP1	YBR291C	ESC2	Q06340	456 aa		4.94	□□□□□ -1.62
CTP1	YBR291C	SPO75	Q07798	868 aa		4.94	□□□□□ -1.62
CTP1	YBR291C	HRK1	Q08732	759 aa	Known RBP	4.94	□□□□□ -1.62
CTP1	YBR291C	RET1	P22276	1149 aa	Known RBP	4.93	□□□□□ -1.62
CTP1	YBR291C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
CTP1	YBR291C	MLS1	P30952	554 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms