RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C THI4P32318 326 aa5.69□□□□□ -1.5
NPL4YBR170C KAE1P36132 386 aa5.69□□□□□ -1.5
NPL4YBR170C UBP12P39538 1254 aa5.69□□□□□ -1.5
NPL4YBR170C YGR125WP53273 1036 aa5.69□□□□□ -1.5
NPL4YBR170C PMT7Q06644 662 aa5.69□□□□□ -1.5
NPL4YBR170C SPO75Q07798 868 aa5.69□□□□□ -1.5
NPL4YBR170C ERR1P0CX10 437 aa5.68□□□□□ -1.5
NPL4YBR170C ERR2P0CX11 437 aa5.68□□□□□ -1.5
NPL4YBR170C RAD27P26793 382 aa5.68□□□□□ -1.5
NPL4YBR170C SQT1P35184 431 aa5.68□□□□□ -1.5
NPL4YBR170C RSM26P47141 266 aa5.68□□□□□ -1.5
NPL4YBR170C ITC1P53125 1264 aa5.68□□□□□ -1.5
NPL4YBR170C SEC23P15303 768 aaKnown RBP5.68□□□□□ -1.5
NPL4YBR170C AGP1P25376 633 aa5.68□□□□□ -1.5
NPL4YBR170C RPL8BP29453 256 aaKnown RBP5.68□□□□□ -1.5
NPL4YBR170C YGL140CP53120 1219 aa5.68□□□□□ -1.5
NPL4YBR170C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
NPL4YBR170C OSH2Q12451 1283 aa5.68□□□□□ -1.5
NPL4YBR170C GAL11P19659 1081 aa5.67□□□□□ -1.5
NPL4YBR170C LIP5P32875 414 aa5.67□□□□□ -1.5
NPL4YBR170C RIM11P38615 370 aa5.67□□□□□ -1.5
NPL4YBR170C PEX28P38848 579 aa5.67□□□□□ -1.5
NPL4YBR170C SHE9Q04172 456 aa5.67□□□□□ -1.5
NPL4YBR170C HDA2Q06629 674 aa5.67□□□□□ -1.5
NPL4YBR170C TRP2P00899 507 aaKnown RBP5.66□□□□□ -1.5
NPL4YBR170C CAN1P04817 590 aa5.66□□□□□ -1.5
NPL4YBR170C HEM13P11353 328 aaKnown RBP5.66□□□□□ -1.5
NPL4YBR170C SEA4P38164 1038 aa5.66□□□□□ -1.5
NPL4YBR170C APM2P38700 605 aa5.66□□□□□ -1.5
NPL4YBR170C GGA2P38817 585 aaKnown RBP5.66□□□□□ -1.5
NPL4YBR170C HXT13P39924 564 aa5.66□□□□□ -1.5
NPL4YBR170C HXT17P53631 564 aa5.66□□□□□ -1.5
NPL4YBR170C HXT15P54854 567 aa5.66□□□□□ -1.5
NPL4YBR170C DNM1P54861 757 aa5.66□□□□□ -1.5
NPL4YBR170C FMP25Q08023 583 aa5.66□□□□□ -1.5
NPL4YBR170C CMR1Q12510 522 aaKnown RBP5.66□□□□□ -1.5
NPL4YBR170C NOP14Q99207 810 aaKnown RBP5.66□□□□□ -1.5
NPL4YBR170C CIT1P00890 479 aa5.65□□□□□ -1.5
NPL4YBR170C TAF13P11747 167 aa5.65□□□□□ -1.5
NPL4YBR170C HSP60P19882 572 aaKnown RBP5.65□□□□□ -1.5
NPL4YBR170C MRP8P35719 219 aa5.65□□□□□ -1.5
NPL4YBR170C YKR073CP36153 106 aa5.65□□□□□ -1.5
NPL4YBR170C IRR1P40541 1150 aa5.65□□□□□ -1.5
NPL4YBR170C PFD1P46988 109 aa5.65□□□□□ -1.5
NPL4YBR170C NOG1Q02892 647 aaKnown RBP5.65□□□□□ -1.5
NPL4YBR170C SRM1P21827 482 aa5.65□□□□□ -1.51
NPL4YBR170C RSC6P25632 483 aa5.65□□□□□ -1.51
NPL4YBR170C ABD1P32783 436 aaPredicted RBP5.65□□□□□ -1.51
NPL4YBR170C RER2P35196 286 aa5.65□□□□□ -1.51
NPL4YBR170C VBA5P36172 582 aa5.65□□□□□ -1.51
NPL4YBR170C CRP1P38845 465 aaKnown RBP5.65□□□□□ -1.51
NPL4YBR170C YEN1P40028 759 aa5.65□□□□□ -1.51
NPL4YBR170C KRI1P42846 591 aaKnown RBP5.65□□□□□ -1.51
NPL4YBR170C PEX13P80667 386 aa5.65□□□□□ -1.51
NPL4YBR170C ESC2Q06340 456 aa5.65□□□□□ -1.51
NPL4YBR170C SLP1Q12232 587 aa5.65□□□□□ -1.51
NPL4YBR170C TRP3P00937 484 aa5.64□□□□□ -1.51
NPL4YBR170C PRP5P21372 849 aaPredicted RBP5.64□□□□□ -1.51
NPL4YBR170C NPR1P22211 790 aa5.64□□□□□ -1.51
NPL4YBR170C SBA1P28707 216 aaKnown RBP5.64□□□□□ -1.51
NPL4YBR170C LYP1P32487 611 aa5.64□□□□□ -1.51
NPL4YBR170C TOS1P38288 455 aa5.64□□□□□ -1.51
NPL4YBR170C YNR040WP53736 256 aa5.64□□□□□ -1.51
NPL4YBR170C SIW14P53965 281 aa5.64□□□□□ -1.51
NPL4YBR170C SPO20Q04359 397 aa5.64□□□□□ -1.51
NPL4YBR170C AOS1Q06624 347 aa5.64□□□□□ -1.51
NPL4YBR170C YLR122CQ12312 125 aa5.64□□□□□ -1.51
NPL4YBR170C MSH3P25336 1018 aa5.63□□□□□ -1.51
NPL4YBR170C ERP6P53198 216 aa5.63□□□□□ -1.51
NPL4YBR170C RDH54P38086 958 aa5.62□□□□□ -1.51
NPL4YBR170C YLR225CQ05948 407 aaKnown RBP5.62□□□□□ -1.51
NPL4YBR170C EAF1Q06337 982 aa5.62□□□□□ -1.51
NPL4YBR170C REC8Q12188 680 aa5.62□□□□□ -1.51
NPL4YBR170C ARE1P25628 610 aa5.62□□□□□ -1.51
NPL4YBR170C MSH2P25847 964 aa5.62□□□□□ -1.51
NPL4YBR170C PBY1P38254 753 aa5.62□□□□□ -1.51
NPL4YBR170C ENT3P47160 408 aa5.62□□□□□ -1.51
NPL4YBR170C YNR029CP53729 429 aaKnown RBP5.62□□□□□ -1.51
NPL4YBR170C TAF8Q03750 510 aa5.62□□□□□ -1.51
NPL4YBR170C NTG2Q08214 380 aa5.62□□□□□ -1.51
NPL4YBR170C YOL057WQ08225 711 aa5.62□□□□□ -1.51
NPL4YBR170C PUB1P32588 453 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
NPL4YBR170C SWE1P32944 819 aa5.61□□□□□ -1.51
NPL4YBR170C ZDS1P50111 915 aaKnown RBP5.61□□□□□ -1.51
NPL4YBR170C RTA1P53047 317 aa5.61□□□□□ -1.51
NPL4YBR170C UTP8P53276 713 aaKnown RBP5.61□□□□□ -1.51
NPL4YBR170C ADR1P07248 1323 aa5.6□□□□□ -1.51
NPL4YBR170C YER156CP40093 338 aaKnown RBP5.6□□□□□ -1.51
NPL4YBR170C HUL4P40985 892 aa5.6□□□□□ -1.51
NPL4YBR170C PPT1P53043 513 aa5.6□□□□□ -1.51
NPL4YBR170C GLO4Q12320 285 aa5.6□□□□□ -1.51
NPL4YBR170C FUS1P11710 512 aa5.6□□□□□ -1.51
NPL4YBR170C CHS2P14180 963 aa5.6□□□□□ -1.51
NPL4YBR170C RPL8AP17076 256 aaKnown RBP5.6□□□□□ -1.51
NPL4YBR170C SAF1P38352 637 aa5.6□□□□□ -1.51
NPL4YBR170C SHU2P38957 223 aa5.6□□□□□ -1.51
NPL4YBR170C TPM2P40414 161 aa5.6□□□□□ -1.51
NPL4YBR170C ROD1Q02805 837 aa5.6□□□□□ -1.51
NPL4YBR170C PUF4P25339 888 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
NPL4YBR170C ELM1P32801 640 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms