RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W SWC3P31376 625 aa5.66□□□□□ -1.5
SIF2YBR103W SIC1P38634 284 aa5.66□□□□□ -1.5
SIF2YBR103W SPL2P38839 148 aa5.66□□□□□ -1.5
SIF2YBR103W TPM2P40414 161 aa5.66□□□□□ -1.5
SIF2YBR103W RMD1Q03441 430 aa5.66□□□□□ -1.5
SIF2YBR103W CSI1Q04368 295 aa5.66□□□□□ -1.5
SIF2YBR103W PIN2Q12057 282 aa5.66□□□□□ -1.5
SIF2YBR103W WRS1Q12109 432 aaKnown RBP5.66□□□□□ -1.5
SIF2YBR103W ADR1P07248 1323 aa5.66□□□□□ -1.5
SIF2YBR103W PET111P08468 800 aa5.66□□□□□ -1.5
SIF2YBR103W MSM1P22438 575 aa5.66□□□□□ -1.5
SIF2YBR103W MCM2P29469 868 aa5.66□□□□□ -1.5
SIF2YBR103W GCD6P32501 712 aaKnown RBP5.66□□□□□ -1.5
SIF2YBR103W IXR1P33417 597 aa5.66□□□□□ -1.5
SIF2YBR103W TCD1P38756 429 aa5.66□□□□□ -1.5
SIF2YBR103W HAL5P38970 855 aaKnown RBP5.66□□□□□ -1.5
SIF2YBR103W DJP1P40564 432 aa5.66□□□□□ -1.5
SIF2YBR103W YJL049WP47048 450 aa5.66□□□□□ -1.5
SIF2YBR103W VPS16Q03308 798 aa5.66□□□□□ -1.5
SIF2YBR103W SPR28Q04921 423 aa5.66□□□□□ -1.5
SIF2YBR103W ESC2Q06340 456 aa5.66□□□□□ -1.5
SIF2YBR103W THS1P04801 734 aaKnown RBP5.65□□□□□ -1.51
SIF2YBR103W SRP54P20424 541 aaKnown RBP5.65□□□□□ -1.51
SIF2YBR103W CLB1P24868 471 aa5.65□□□□□ -1.51
SIF2YBR103W MGM1P32266 881 aa5.65□□□□□ -1.51
SIF2YBR103W SUV3P32580 737 aa5.65□□□□□ -1.51
SIF2YBR103W PEP7P32609 515 aa5.65□□□□□ -1.51
SIF2YBR103W UFD2P54860 961 aa5.65□□□□□ -1.51
SIF2YBR103W RNT1Q02555 471 aa5.65□□□□□ -1.51
SIF2YBR103W TY1A-DR4O74302 440 aa5.64□□□□□ -1.51
SIF2YBR103W CYT1P07143 309 aa5.64□□□□□ -1.51
SIF2YBR103W PHO4P07270 312 aaKnown RBP5.64□□□□□ -1.51
SIF2YBR103W TY1A-HP0C2I4 478 aaKnown RBP5.64□□□□□ -1.51
SIF2YBR103W TY1A-AP0CX57 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-PR1P0CX58 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-ORP0CX59 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-PR2P0CX60 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-DR5P0CX65 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-ER2P0CX66 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-GR3P0CX67 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-LR1P0CX68 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-MR2P0CX69 440 aa5.64□□□□□ -1.51
SIF2YBR103W NGR1P32831 672 aaKnown RBP5.64□□□□□ -1.51
SIF2YBR103W ARL1P38116 183 aaKnown RBP5.64□□□□□ -1.51
SIF2YBR103W HXT10P43581 546 aa5.64□□□□□ -1.51
SIF2YBR103W ULI1P43604 169 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-JR2P47099 440 aa5.64□□□□□ -1.51
SIF2YBR103W RPT4P53549 437 aaKnown RBP5.64□□□□□ -1.51
SIF2YBR103W TIM50Q02776 476 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-DR1Q03856 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-ML1Q04706 440 aaKnown RBP5.64□□□□□ -1.51
SIF2YBR103W HDA3Q06623 655 aa5.64□□□□□ -1.51
SIF2YBR103W THI3Q07471 609 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-BRQ12217 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-NL2Q12470 440 aa5.64□□□□□ -1.51
SIF2YBR103W TY1A-GR2Q12485 440 aa5.64□□□□□ -1.51
SIF2YBR103W PCT1P13259 424 aa5.63□□□□□ -1.51
SIF2YBR103W VAC17P25591 423 aa5.63□□□□□ -1.51
SIF2YBR103W SWI3P32591 825 aa5.63□□□□□ -1.51
SIF2YBR103W BOI1P38041 980 aaKnown RBP5.63□□□□□ -1.51
SIF2YBR103W PAC1P39946 494 aaKnown RBP5.63□□□□□ -1.51
SIF2YBR103W IOC3P43596 787 aa5.63□□□□□ -1.51
SIF2YBR103W RTS3P53289 263 aa5.63□□□□□ -1.51
SIF2YBR103W YNL035CP53962 389 aaKnown RBP5.63□□□□□ -1.51
SIF2YBR103W VPS60Q03390 229 aa5.63□□□□□ -1.51
SIF2YBR103W ECM16Q04217 1267 aaKnown RBP5.63□□□□□ -1.51
SIF2YBR103W CRF1Q04930 467 aa5.63□□□□□ -1.51
SIF2YBR103W ESF1Q06344 628 aaKnown RBP5.63□□□□□ -1.51
SIF2YBR103W GPI13Q07830 1017 aa5.63□□□□□ -1.51
SIF2YBR103W GAS5Q08193 484 aa5.63□□□□□ -1.51
SIF2YBR103W SSF2Q12153 453 aaPredicted RBP5.63□□□□□ -1.51
SIF2YBR103W RRG1Q12167 365 aaPredicted RBP5.63□□□□□ -1.51
SIF2YBR103W RAD2P07276 1031 aa5.63□□□□□ -1.51
SIF2YBR103W DAL5P15365 543 aa5.63□□□□□ -1.51
SIF2YBR103W SEC2P17065 759 aa5.63□□□□□ -1.51
SIF2YBR103W PAT1P25644 796 aaKnown RBP5.63□□□□□ -1.51
SIF2YBR103W MSP1P28737 362 aa5.63□□□□□ -1.51
SIF2YBR103W DEP1P31385 405 aa5.63□□□□□ -1.51
SIF2YBR103W GCD7P32502 381 aaPredicted RBP5.63□□□□□ -1.51
SIF2YBR103W FET4P40988 552 aa5.63□□□□□ -1.51
SIF2YBR103W DAK2P43550 591 aa5.63□□□□□ -1.51
SIF2YBR103W YGR117CP53270 476 aa5.63□□□□□ -1.51
SIF2YBR103W ALG12P53730 551 aa5.63□□□□□ -1.51
SIF2YBR103W SRC1Q03707 834 aa5.63□□□□□ -1.51
SIF2YBR103W PSF3Q12146 194 aa5.63□□□□□ -1.51
SIF2YBR103W SNU66Q12420 587 aaPredicted RBP5.63□□□□□ -1.51
SIF2YBR103W POM152P39685 1337 aa5.62□□□□□ -1.51
SIF2YBR103W CIT2P08679 460 aa5.62□□□□□ -1.51
SIF2YBR103W RPS6AP0CX37 236 aaKnown RBP5.62□□□□□ -1.51
SIF2YBR103W RPS6BP0CX38 236 aaPredicted RBP5.62□□□□□ -1.51
SIF2YBR103W LCB1P25045 558 aaKnown RBP5.62□□□□□ -1.51
SIF2YBR103W ISC10P32645 267 aa5.62□□□□□ -1.51
SIF2YBR103W AFG2P32794 780 aa5.62□□□□□ -1.51
SIF2YBR103W PRP42Q03776 544 aaKnown RBP5.62□□□□□ -1.51
SIF2YBR103W STI1P15705 589 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SIF2YBR103W PET112P33893 541 aa5.61□□□□□ -1.51
SIF2YBR103W YBR197CP38306 217 aa5.61□□□□□ -1.51
SIF2YBR103W TIF11P38912 153 aaKnown RBP5.61□□□□□ -1.51
SIF2YBR103W YMR124WP39523 943 aaKnown RBP5.61□□□□□ -1.51
SIF2YBR103W RPS26AP39938 119 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms