RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
SAMMSON-226ENST00000642089 RALGAPBQ86X10 1494 aa6.93□□□□□ -1.3
SAMMSON-226ENST00000642089 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
SAMMSON-226ENST00000642089 CABP1Q9NZU7 370 aa6.93□□□□□ -1.3
SAMMSON-226ENST00000642089 USP21Q9UK80 565 aa6.93□□□□□ -1.3
SAMMSON-226ENST00000642089 TOPAZ1Q8N9V7 1692 aa6.93□□□□□ -1.3
SAMMSON-226ENST00000642089 EVC2Q86UK5 1308 aa6.93□□□□□ -1.3
SAMMSON-226ENST00000642089 TRPM3Q9HCF6 1732 aaPredicted RBP6.92□□□□□ -1.3
SAMMSON-226ENST00000642089 THSD4Q6ZMP0 1018 aa6.92□□□□□ -1.3
SAMMSON-226ENST00000642089 IFNLR1Q8IU57 520 aaPredicted RBP6.92□□□□□ -1.3
SAMMSON-226ENST00000642089 QTRT2Q9H974 415 aaKnown RBP6.92□□□□□ -1.3
SAMMSON-226ENST00000642089 SBNO1A3KN83 1393 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ARHGEF10O15013 1369 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ZBTB7CA1YPR0 619 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ITGBL1O95965 494 aaPredicted RBP6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 NUDT7P0C024 238 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 RXRBP28702 533 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 INSM1Q01101 510 aaPredicted RBP6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 PODXL2Q9NZ53 605 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ABCA3Q99758 1704 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 MARF1Q9Y4F3 1742 aaKnown RBP6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ST20-MTHFSA0A0A6YYL1 179 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 KLHL34Q8N239 644 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ABTB2Q8N961 1025 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 TMC1Q8TDI8 760 aa6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
SAMMSON-226ENST00000642089 ALS2Q96Q42 1657 aa6.9□□□□□ -1.3
SAMMSON-226ENST00000642089 POLR3AO14802 1390 aaPredicted RBP6.9□□□□□ -1.31
SAMMSON-226ENST00000642089 PLEKHG3A1L390 1219 aa6.9□□□□□ -1.31
SAMMSON-226ENST00000642089 GOLGA8CPA6NN73 597 aa6.9□□□□□ -1.31
SAMMSON-226ENST00000642089 SOX12O15370 315 aa6.9□□□□□ -1.31
SAMMSON-226ENST00000642089 ZC3H6P61129 1189 aaKnown RBP6.9□□□□□ -1.31
SAMMSON-226ENST00000642089 SPRYD3Q8NCJ5 442 aa6.9□□□□□ -1.31
SAMMSON-226ENST00000642089 PLCH1Q4KWH8 1693 aa6.89□□□□□ -1.31
SAMMSON-226ENST00000642089 FAM83GA6ND36 823 aa6.89□□□□□ -1.31
SAMMSON-226ENST00000642089 CHRNA2Q15822 529 aa6.89□□□□□ -1.31
SAMMSON-226ENST00000642089 BCL9LQ86UU0 1499 aa6.89□□□□□ -1.31
SAMMSON-226ENST00000642089 USP47Q96K76 1375 aa6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 RGS12O14924 1447 aa6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 RBM6P78332 1123 aaKnown RBP6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 MICALL2Q8IY33 904 aa6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 FNBP4Q8N3X1 1017 aaPredicted RBP6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 PRDM11Q9NQV5 511 aa6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 BTG4Q9NY30 223 aa6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 TRPC5Q9UL62 973 aaPredicted RBP6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 CLSPNQ9HAW4 1339 aa6.88□□□□□ -1.31
SAMMSON-226ENST00000642089 USP6P35125 1406 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 NLRP6P59044 892 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 UNC5CLQ8IV45 518 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 TESK2Q96S53 571 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 SLC12A5Q9H2X9 1139 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 STRN4Q9NRL3 753 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 PHRF1Q9P1Y6 1649 aaKnown RBP6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 CRYBG1Q9Y4K1 1723 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 ATAD2Q6PL18 1390 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 KIAA0232Q92628 1395 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 ATRNO75882 1429 aa6.87□□□□□ -1.31
SAMMSON-226ENST00000642089 PDAP1Q13442 181 aaKnown RBP6.86□□□□□ -1.31
SAMMSON-226ENST00000642089 SLIT2O94813 1529 aa6.86□□□□□ -1.31
SAMMSON-226ENST00000642089 NLRP13Q86W25 1043 aa6.86□□□□□ -1.31
SAMMSON-226ENST00000642089 GJD4Q96KN9 370 aaPredicted RBP6.86□□□□□ -1.31
SAMMSON-226ENST00000642089 USP35Q9P2H5 1018 aa6.86□□□□□ -1.31
SAMMSON-226ENST00000642089 AKAP12Q02952 1782 aa6.86□□□□□ -1.31
SAMMSON-226ENST00000642089 TTC21BQ7Z4L5 1316 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 SBNO2Q9Y2G9 1366 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 PIK3C2AO00443 1686 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 COL14A1Q05707 1796 aaKnown RBP6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 GCP02774 474 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 NME9Q86XW9 330 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 GLI3P10071 1580 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 NRKQ7Z2Y5 1582 aa6.85□□□□□ -1.31
SAMMSON-226ENST00000642089 EVA1CP58658 441 aa6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 TMF1P82094 1093 aa6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 FAM98CQ17RN3 349 aaKnown RBP6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 TERF2IPQ9NYB0 399 aa6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 A0A1W2PP64 1363 aa6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 CPSF1Q10570 1443 aaKnown RBP6.84□□□□□ -1.31
SAMMSON-226ENST00000642089 CD163L1Q9NR16 1453 aa6.84□□□□□ -1.32
SAMMSON-226ENST00000642089 MON2Q7Z3U7 1717 aa6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 NWD2Q9ULI1 1742 aa6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 HSPA5P11021 654 aaKnown RBP6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 VPS72Q15906 364 aa6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 USP19O94966 1318 aa6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 SSH2Q76I76 1423 aa6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 CDK12Q9NYV4 1490 aaPredicted RBP6.83□□□□□ -1.32
SAMMSON-226ENST00000642089 ECM2O94769 699 aaPredicted RBP6.82□□□□□ -1.32
SAMMSON-226ENST00000642089 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
SAMMSON-226ENST00000642089 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
SAMMSON-226ENST00000642089 SEPT12Q8IYM1 358 aa6.82□□□□□ -1.32
SAMMSON-226ENST00000642089 SPOCK2Q92563 424 aa6.82□□□□□ -1.32
SAMMSON-226ENST00000642089 UPF1Q92900 1129 aaKnown RBP eCLIP6.82□□□□□ -1.32
SAMMSON-226ENST00000642089 WNT2BQ93097 391 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms