RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 CEP85Q6P2H3 762 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 RGS12O14924 1447 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
SPIN3-239ENST00000640463 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 TECPR2O15040 1411 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
SPIN3-239ENST00000640463 F6X3S4 739 aa17.29■□□□□ 0.36
SPIN3-239ENST00000640463 SSFA2P28290 1259 aa17.29■□□□□ 0.36
SPIN3-239ENST00000640463 LTKP29376 864 aa17.29■□□□□ 0.36
SPIN3-239ENST00000640463 G2E3Q7L622 706 aa17.29■□□□□ 0.36
SPIN3-239ENST00000640463 TNRQ92752 1358 aa17.29■□□□□ 0.36
SPIN3-239ENST00000640463 CIZ1Q9ULV3 898 aaPredicted RBP17.28■□□□□ 0.36
SPIN3-239ENST00000640463 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
SPIN3-239ENST00000640463 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
SPIN3-239ENST00000640463 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
SPIN3-239ENST00000640463 RTL1A6NKG5 1358 aa17.27■□□□□ 0.36
SPIN3-239ENST00000640463 PEAK1Q9H792 1746 aa17.27■□□□□ 0.36
SPIN3-239ENST00000640463 SDSP20132 328 aa17.27■□□□□ 0.36
SPIN3-239ENST00000640463 MAP3K19Q56UN5 1328 aa17.27■□□□□ 0.36
SPIN3-239ENST00000640463 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.36
SPIN3-239ENST00000640463 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.35
SPIN3-239ENST00000640463 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.35
SPIN3-239ENST00000640463 NRKQ7Z2Y5 1582 aa17.26■□□□□ 0.35
SPIN3-239ENST00000640463 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
SPIN3-239ENST00000640463 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
SPIN3-239ENST00000640463 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
SPIN3-239ENST00000640463 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
SPIN3-239ENST00000640463 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
SPIN3-239ENST00000640463 GRPEL1Q9HAV7 217 aa17.25■□□□□ 0.35
SPIN3-239ENST00000640463 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
SPIN3-239ENST00000640463 GAS2L3Q86XJ1 694 aa17.25■□□□□ 0.35
SPIN3-239ENST00000640463 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
SPIN3-239ENST00000640463 RIMS1Q86UR5 1692 aaKnown RBP17.25■□□□□ 0.35
SPIN3-239ENST00000640463 USP6P35125 1406 aa17.25■□□□□ 0.35
SPIN3-239ENST00000640463 PLEKHG3A1L390 1219 aa17.25■□□□□ 0.35
SPIN3-239ENST00000640463 MRE11P49959 708 aa17.25■□□□□ 0.35
SPIN3-239ENST00000640463 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
SPIN3-239ENST00000640463 CRB1P82279 1406 aa17.24■□□□□ 0.35
SPIN3-239ENST00000640463 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
SPIN3-239ENST00000640463 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
SPIN3-239ENST00000640463 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
SPIN3-239ENST00000640463 PTPRCP08575 1304 aa17.24■□□□□ 0.35
SPIN3-239ENST00000640463 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
SPIN3-239ENST00000640463 RABEP1Q15276 862 aa17.22■□□□□ 0.35
SPIN3-239ENST00000640463 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
SPIN3-239ENST00000640463 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
SPIN3-239ENST00000640463 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.34
SPIN3-239ENST00000640463 EYA1Q99502 592 aa17.21■□□□□ 0.34
SPIN3-239ENST00000640463 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.34
SPIN3-239ENST00000640463 AMPHP49418 695 aa17.2■□□□□ 0.34
SPIN3-239ENST00000640463 PKP1Q13835 747 aa17.2■□□□□ 0.34
SPIN3-239ENST00000640463 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
SPIN3-239ENST00000640463 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
SPIN3-239ENST00000640463 BAG4O95429 457 aaKnown RBP17.19■□□□□ 0.34
SPIN3-239ENST00000640463 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
SPIN3-239ENST00000640463 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
SPIN3-239ENST00000640463 CASC1Q6TDU7 716 aa17.18■□□□□ 0.34
SPIN3-239ENST00000640463 TOPAZ1Q8N9V7 1692 aa17.18■□□□□ 0.34
SPIN3-239ENST00000640463 HMMRO75330 724 aa17.17■□□□□ 0.34
SPIN3-239ENST00000640463 SKOR2Q2VWA4 1001 aaPredicted RBP17.17■□□□□ 0.34
SPIN3-239ENST00000640463 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
SPIN3-239ENST00000640463 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
SPIN3-239ENST00000640463 ARHGEF10O15013 1369 aa17.16■□□□□ 0.34
SPIN3-239ENST00000640463 PDE1AP54750 535 aa17.16■□□□□ 0.34
SPIN3-239ENST00000640463 MCTP1Q6DN14 999 aa17.16■□□□□ 0.34
SPIN3-239ENST00000640463 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
SPIN3-239ENST00000640463 NALCNQ8IZF0 1738 aa17.16■□□□□ 0.34
SPIN3-239ENST00000640463 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
SPIN3-239ENST00000640463 FKBP5Q13451 457 aaPredicted RBP17.16■□□□□ 0.34
SPIN3-239ENST00000640463 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
SPIN3-239ENST00000640463 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
SPIN3-239ENST00000640463 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
SPIN3-239ENST00000640463 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
SPIN3-239ENST00000640463 FLT4P35916 1363 aa17.15■□□□□ 0.34
SPIN3-239ENST00000640463 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
SPIN3-239ENST00000640463 GOLGA6L22H0YM25 854 aa17.15■□□□□ 0.34
SPIN3-239ENST00000640463 NLRP6P59044 892 aa17.15■□□□□ 0.34
SPIN3-239ENST00000640463 GNAI2P04899 355 aa17.15■□□□□ 0.34
SPIN3-239ENST00000640463 ERC2O15083 957 aa17.14■□□□□ 0.34
SPIN3-239ENST00000640463 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.34
SPIN3-239ENST00000640463 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.34
SPIN3-239ENST00000640463 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
SPIN3-239ENST00000640463 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
SPIN3-239ENST00000640463 FLIIQ13045 1269 aa17.14■□□□□ 0.33
SPIN3-239ENST00000640463 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
SPIN3-239ENST00000640463 REC8O95072 547 aa17.13■□□□□ 0.33
SPIN3-239ENST00000640463 FMN2Q9NZ56 1722 aa17.13■□□□□ 0.33
SPIN3-239ENST00000640463 ST18O60284 1047 aa17.13■□□□□ 0.33
SPIN3-239ENST00000640463 FOXD4L5Q5VV16 416 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-239ENST00000640463 FOXD4L4Q8WXT5 416 aaPredicted RBP17.13■□□□□ 0.33
SPIN3-239ENST00000640463 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
SPIN3-239ENST00000640463 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms