RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 MTHFSDQ2M296 383 aaKnown RBP7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 PHACTR3Q96KR7 559 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 CDK12Q9NYV4 1490 aaPredicted RBP7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 KAT6BQ8WYB5 2073 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 DCTN1Q14203 1278 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 BCL9LQ86UU0 1499 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 SHPRHQ149N8 1683 aa7.61□□□□□ -1.19
HNRNPU-220ENST00000639667 CABP4P57796 275 aa7.6□□□□□ -1.19
HNRNPU-220ENST00000639667 SLIT2O94813 1529 aa7.6□□□□□ -1.19
HNRNPU-220ENST00000639667 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
HNRNPU-220ENST00000639667 HSP90AB1P08238 724 aaKnown RBP7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 BARGINQ6ZT62 677 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 MCM10Q7L590 875 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 THUMPD2Q9BTF0 503 aaKnown RBP7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 MAP2P11137 1827 aaKnown RBP7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 PHRF1Q9P1Y6 1649 aaKnown RBP7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 PCDH11XQ9BZA7 1347 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 PCDH11YQ9BZA8 1340 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 GNAT3A8MTJ3 354 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 LMOD3Q0VAK6 560 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 NFE2L2Q16236 605 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 ARXQ96QS3 562 aa7.59□□□□□ -1.19
HNRNPU-220ENST00000639667 COL14A1Q05707 1796 aaKnown RBP7.59□□□□□ -1.2
HNRNPU-220ENST00000639667 TRIM37O94972 964 aa7.59□□□□□ -1.2
HNRNPU-220ENST00000639667 PRIM1P49642 420 aaKnown RBP7.59□□□□□ -1.2
HNRNPU-220ENST00000639667 RBM42Q9BTD8 480 aaKnown RBP7.59□□□□□ -1.2
HNRNPU-220ENST00000639667 TMOD3Q9NYL9 352 aa7.59□□□□□ -1.2
HNRNPU-220ENST00000639667 TMPOP42166 694 aaKnown RBP7.58□□□□□ -1.2
HNRNPU-220ENST00000639667 AKAP4Q5JQC9 854 aa7.58□□□□□ -1.2
HNRNPU-220ENST00000639667 TTC5Q8N0Z6 440 aa7.58□□□□□ -1.2
HNRNPU-220ENST00000639667 MARCH10Q8NA82 808 aaPredicted RBP7.58□□□□□ -1.2
HNRNPU-220ENST00000639667 COL22A1Q8NFW1 1626 aaPredicted RBP7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 ATRNO75882 1429 aa7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 CYP27B1O15528 508 aa7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 PHKG2P15735 406 aa7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 FAM196AQ6ZSG2 479 aa7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 PTCD1O75127 700 aaKnown RBP7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
HNRNPU-220ENST00000639667 LTN1O94822 1766 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 APBA3O96018 575 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 NFATC2IPQ8NCF5 419 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 RNMTO43148 476 aaKnown RBP7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 KCNQ2O43526 872 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 TSPYL4Q9UJ04 414 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 MEGF6O75095 1541 aa7.56□□□□□ -1.2
HNRNPU-220ENST00000639667 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 ELL2O00472 640 aaPredicted RBP7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 SLC39A6Q13433 755 aa7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.55□□□□□ -1.25e-19■■■■□ 23.2
HNRNPU-220ENST00000639667 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 CALD1Q05682 793 aaKnown RBP7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 MAP3K5Q99683 1374 aa7.55□□□□□ -1.2
HNRNPU-220ENST00000639667 MSH5O43196 834 aa7.54□□□□□ -1.2
HNRNPU-220ENST00000639667 NECTIN2Q92692 538 aa7.54□□□□□ -1.2
HNRNPU-220ENST00000639667 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
HNRNPU-220ENST00000639667 RGPD5Q99666 1765 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 ABCA3Q99758 1704 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 BAG6P46379 1132 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 IL17REQ8NFR9 667 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 PLCH1Q4KWH8 1693 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 BCL11BQ9C0K0 894 aaPredicted RBP7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 OVOS2A0A0G2JMS6 1433 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 KCNQ4P56696 695 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 ILDR2Q71H61 639 aa7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 COL3A1P02461 1466 aaPredicted RBP7.53□□□□□ -1.2
HNRNPU-220ENST00000639667 NGEFQ8N5V2 710 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 RGS12O14924 1447 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 KDRP35968 1356 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 ONECUT3O60422 494 aaPredicted RBP7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 GNAI1P63096 354 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 GOLGA2Q08379 1002 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 TSR2Q969E8 191 aaKnown RBP7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 EN1Q05925 392 aaPredicted RBP7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 WWC1Q8IX03 1113 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 PIGBQ92521 554 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 ASAP1Q9ULH1 1129 aa7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.21
HNRNPU-220ENST00000639667 ERVV-2B6SEH9 535 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 PTF1AQ7RTS3 328 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 DEFB132Q7Z7B7 95 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 HTATSF1O43719 755 aaKnown RBP7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 ATP6V1AP38606 617 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 TNS2Q63HR2 1409 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 MYH16Q9H6N6 1097 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 LMO7Q8WWI1 1683 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 CCNL1Q9UK58 526 aaPredicted RBP7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 COL18A1P39060 1754 aa7.51□□□□□ -1.21
HNRNPU-220ENST00000639667 ABCC6O95255 1503 aa7.5□□□□□ -1.21
HNRNPU-220ENST00000639667 KCNQ3O43525 872 aa7.5□□□□□ -1.21
HNRNPU-220ENST00000639667 TRIM35Q9UPQ4 493 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms