RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 JAKMIP1Q96N16 626 aaKnown RBP20.3■□□□□ 0.84
HNRNPU-217ENST00000638952 AACSQ86V21 672 aa20.29■□□□□ 0.84
HNRNPU-217ENST00000638952 GPATCH11Q8N954 259 aa20.29■□□□□ 0.84
HNRNPU-217ENST00000638952 SYCE3A1L190 88 aa20.29■□□□□ 0.84
HNRNPU-217ENST00000638952 NFE2L2Q16236 605 aa20.29■□□□□ 0.84
HNRNPU-217ENST00000638952 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
HNRNPU-217ENST00000638952 CCDC158Q5M9N0 1113 aa20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 TICAM2Q86XR7 235 aa20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 SPATA32Q96LK8 384 aa20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 CGNQ9P2M7 1197 aaKnown RBP20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 EZRP15311 586 aaKnown RBP20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
HNRNPU-217ENST00000638952 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
HNRNPU-217ENST00000638952 SYCP1Q15431 976 aa20.27■□□□□ 0.84
HNRNPU-217ENST00000638952 KIF6Q6ZMV9 814 aa20.27■□□□□ 0.84
HNRNPU-217ENST00000638952 NCOA1Q15788 1441 aa20.27■□□□□ 0.84
HNRNPU-217ENST00000638952 CAMSAP2Q08AD1 1489 aa20.27■□□□□ 0.84
HNRNPU-217ENST00000638952 SHTN1A0MZ66 631 aa20.27■□□□□ 0.83
HNRNPU-217ENST00000638952 SMARCA5O60264 1052 aaPredicted RBP20.27■□□□□ 0.83
HNRNPU-217ENST00000638952 NUTM1Q86Y26 1132 aa20.27■□□□□ 0.83
HNRNPU-217ENST00000638952 TMCO3Q6UWJ1 677 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 THUMPD2Q9BTF0 503 aaKnown RBP20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 CALCOCO1Q9P1Z2 691 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 IQCEQ6IPM2 695 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 UBXN4Q92575 508 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 ZSCAN30Q86W11 494 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
HNRNPU-217ENST00000638952 BLOC1S2Q6QNY1 142 aa20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 TRERF1Q96PN7 1200 aa20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 NUP62CLQ9H1M0 184 aa20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 MYL6BP14649 208 aa20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 LUC7LQ9NQ29 371 aaKnown RBP20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 LRRFIP2Q9Y608 721 aaKnown RBP20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
HNRNPU-217ENST00000638952 IPO4Q8TEX9 1081 aaKnown RBP20.24■□□□□ 0.83
HNRNPU-217ENST00000638952 ZNF530Q6P9A1 599 aaPredicted RBP20.24■□□□□ 0.83
HNRNPU-217ENST00000638952 CNNM1Q9NRU3 951 aa20.24■□□□□ 0.83
HNRNPU-217ENST00000638952 EXOC6BQ9Y2D4 811 aa20.24■□□□□ 0.83
HNRNPU-217ENST00000638952 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
HNRNPU-217ENST00000638952 CBFA2T2O43439 604 aa20.24■□□□□ 0.83
HNRNPU-217ENST00000638952 CASTP20810 708 aaKnown RBP20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 ABCC5O15440 1437 aa20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 MIS18AQ9NYP9 233 aa20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 RBM25P49756 843 aaKnown RBP20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 RBM42Q9BTD8 480 aaKnown RBP20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 LRPPRCP42704 1394 aaKnown RBP20.23■□□□□ 0.83
HNRNPU-217ENST00000638952 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.22■□□□□ 0.832e-12■□□□□ 10.8
HNRNPU-217ENST00000638952 TXLNBQ8N3L3 684 aa20.22■□□□□ 0.83
HNRNPU-217ENST00000638952 TXLNAP40222 546 aa20.22■□□□□ 0.83
HNRNPU-217ENST00000638952 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
HNRNPU-217ENST00000638952 DACH1Q9UI36 760 aa20.22■□□□□ 0.83
HNRNPU-217ENST00000638952 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
HNRNPU-217ENST00000638952 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
HNRNPU-217ENST00000638952 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
HNRNPU-217ENST00000638952 CDK5RAP3Q96JB5 506 aa20.21■□□□□ 0.83
HNRNPU-217ENST00000638952 ZHX1Q9UKY1 873 aaPredicted RBP20.21■□□□□ 0.83
HNRNPU-217ENST00000638952 PPP6R1Q9UPN7 881 aa20.21■□□□□ 0.83
HNRNPU-217ENST00000638952 CAMK4Q16566 473 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 CCAR1Q8IX12 1150 aaKnown RBP20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 GOLGA6L10A0A0M3HER8 536 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 SSFA2P28290 1259 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 CRACR2AQ9BSW2 395 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 MX1P20591 662 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 MCM10Q7L590 875 aa20.2■□□□□ 0.82
HNRNPU-217ENST00000638952 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 BTBD11A6QL63 1104 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 ALDH1L2Q3SY69 923 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 DUSP27Q5VZP5 1158 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
HNRNPU-217ENST00000638952 CABP4P57796 275 aa20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 GBP3Q9H0R5 595 aa20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 MAP2K1Q02750 393 aaPredicted RBP20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.823e-7■■■■□ 19.6
HNRNPU-217ENST00000638952 CCDC83Q8IWF9 413 aa20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 GBP2P32456 591 aaPredicted RBP20.18■□□□□ 0.82
HNRNPU-217ENST00000638952 CEP57L1Q8IYX8 460 aa20.17■□□□□ 0.82
HNRNPU-217ENST00000638952 SLC3A2P08195 630 aaKnown RBP20.17■□□□□ 0.82
HNRNPU-217ENST00000638952 MAP3K11Q16584 847 aa20.17■□□□□ 0.82
HNRNPU-217ENST00000638952 TRIM22Q8IYM9 498 aa20.17■□□□□ 0.82
HNRNPU-217ENST00000638952 UBE2Q2Q8WVN8 375 aa20.17■□□□□ 0.82
HNRNPU-217ENST00000638952 DDX11Q96FC9 970 aa20.17■□□□□ 0.82
HNRNPU-217ENST00000638952 UPF3BQ9BZI7 483 aaKnown RBP20.16■□□□□ 0.82
HNRNPU-217ENST00000638952 IQGAP2Q13576 1575 aa20.16■□□□□ 0.82
HNRNPU-217ENST00000638952 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
HNRNPU-217ENST00000638952 KRT18P05783 430 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms