RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
KCNMA1-228ENST00000638223 PHF14O94880 888 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 IP6K1Q92551 441 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 ATP5J2-PTCD1G3V325 749 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 AMOTL1Q8IY63 956 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 EXOC6BQ9Y2D4 811 aa12.04□□□□□ -0.48
KCNMA1-228ENST00000638223 C20orf194Q5TEA3 1177 aa12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 AAMPQ13685 434 aa12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 NFATC2IPQ8NCF5 419 aa12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 EIF2AK4Q9P2K8 1649 aaKnown RBP12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 CEP126Q9P2H0 1117 aa12.03□□□□□ -0.48
KCNMA1-228ENST00000638223 FLIIQ13045 1269 aa12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 EFCAB6Q5THR3 1501 aa12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 CDK11BP21127 795 aaKnown RBP12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 FOXD4L6Q3SYB3 417 aaPredicted RBP12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 FOXD4L3Q6VB84 417 aaPredicted RBP12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 ZNF652Q9Y2D9 606 aa12.02□□□□□ -0.48
KCNMA1-228ENST00000638223 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 TRDNQ13061 729 aa12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 AK7Q96M32 723 aa12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 TRMT112Q9UI30 125 aaKnown RBP12.02□□□□□ -0.49
KCNMA1-228ENST00000638223 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 RICTORQ6R327 1708 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 A0A087WZG4 1122 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 PI4KAP1Q8N8J0 262 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
KCNMA1-228ENST00000638223 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
KCNMA1-228ENST00000638223 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 GCC2Q8IWJ2 1684 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
KCNMA1-228ENST00000638223 LRRCC1Q9C099 1032 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
KCNMA1-228ENST00000638223 MTMR7Q9Y216 660 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
KCNMA1-228ENST00000638223 DHX16O60231 1041 aaKnown RBP12□□□□□ -0.49
KCNMA1-228ENST00000638223 CCDC158Q5M9N0 1113 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 AACSQ86V21 672 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 ERC1Q8IUD2 1116 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 HYPKQ9NX55 129 aa12□□□□□ -0.49
KCNMA1-228ENST00000638223 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 PRDM15P57071 1507 aaPredicted RBP11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 TTC39AQ5SRH9 613 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 ROBO2Q9HCK4 1378 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 CNTROBQ8N137 903 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 GCC1Q96CN9 775 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 VPS53Q5VIR6 699 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 MAP3K2Q9Y2U5 619 aa11.99□□□□□ -0.49
KCNMA1-228ENST00000638223 TRIM27P14373 513 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 IGHMBP2P38935 993 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 ALDH1L2Q3SY69 923 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 RNF20Q5VTR2 975 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 C8orf58Q8NAV2 365 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 AKAP17AQ02040 695 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 FAM184AQ8NB25 1140 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 EDC4Q6P2E9 1401 aaKnown RBP11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
KCNMA1-228ENST00000638223 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 RALYLQ86SE5 291 aaKnown RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 GNL3LQ9NVN8 582 aaKnown RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 LRRFIP2Q9Y608 721 aaKnown RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 POLR3AO14802 1390 aaPredicted RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 SPATA31E1Q6ZUB1 1445 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 CDC45O75419 566 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 METTL24Q5JXM2 366 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 RPAP2Q8IXW5 612 aaPredicted RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 TRIM44Q96DX7 344 aaPredicted RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 NBPF6Q5VWK0 638 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 CPLX2Q6PUV4 134 aaKnown RBP11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 XAGE3Q8WTP9 111 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 NBPF4Q96M43 638 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 CPLX1O14810 134 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms